RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 KNDC1Q76NI1 1749 aa8.51□□□□□ -1.05
HIF1A-208ENST00000556237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.51□□□□□ -1.05
HIF1A-208ENST00000556237 TRMT44Q8IYL2 757 aaKnown RBP8.51□□□□□ -1.05
HIF1A-208ENST00000556237 PMFBP1Q8TBY8 1022 aa8.51□□□□□ -1.05
HIF1A-208ENST00000556237 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
HIF1A-208ENST00000556237 PTCH1Q13635 1447 aa8.51□□□□□ -1.05
HIF1A-208ENST00000556237 FYB1O15117 783 aa8.5□□□□□ -1.05
HIF1A-208ENST00000556237 TNNT2P45379 298 aaPredicted RBP8.5□□□□□ -1.05
HIF1A-208ENST00000556237 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
HIF1A-208ENST00000556237 PPIP5K1Q6PFW1 1433 aa8.5□□□□□ -1.05
HIF1A-208ENST00000556237 NGDNQ8NEJ9 315 aaKnown RBP8.5□□□□□ -1.05
HIF1A-208ENST00000556237 HELBQ8NG08 1087 aaPredicted RBP8.5□□□□□ -1.05
HIF1A-208ENST00000556237 PNISRQ8TF01 805 aaKnown RBP8.5□□□□□ -1.05
HIF1A-208ENST00000556237 GGNBP2Q9H3C7 697 aa8.5□□□□□ -1.05
HIF1A-208ENST00000556237 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.5□□□□□ -1.05
HIF1A-208ENST00000556237 EMILIN1Q9Y6C2 1016 aa8.5□□□□□ -1.05
HIF1A-208ENST00000556237 ACEP12821 1306 aa8.5□□□□□ -1.05
HIF1A-208ENST00000556237 A0A1W2PP64 1363 aa8.49□□□□□ -1.05
HIF1A-208ENST00000556237 BRD4O60885 1362 aaPredicted RBP8.49□□□□□ -1.05
HIF1A-208ENST00000556237 MAGEB6P1A0A0J9YX57 407 aa8.49□□□□□ -1.05
HIF1A-208ENST00000556237 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
HIF1A-208ENST00000556237 SH3BP5LQ7L8J4 393 aa8.49□□□□□ -1.05
HIF1A-208ENST00000556237 CCDC116Q8IYX3 515 aa8.49□□□□□ -1.05
HIF1A-208ENST00000556237 CHD2O14647 1828 aaKnown RBP8.49□□□□□ -1.05
HIF1A-208ENST00000556237 MYOM1P52179 1685 aa8.49□□□□□ -1.05
HIF1A-208ENST00000556237 KCNMA1Q12791 1236 aa8.48□□□□□ -1.05
HIF1A-208ENST00000556237 C19orf44Q9H6X5 657 aa8.48□□□□□ -1.05
HIF1A-208ENST00000556237 LMTK3Q96Q04 1460 aa8.48□□□□□ -1.05
HIF1A-208ENST00000556237 XRN1Q8IZH2 1706 aaKnown RBP8.47□□□□□ -1.05
HIF1A-208ENST00000556237 LOC100996750A0A140TA64 210 aa8.47□□□□□ -1.05
HIF1A-208ENST00000556237 TTLL8A6PVC2 850 aa8.47□□□□□ -1.05
HIF1A-208ENST00000556237 RFC5P40937 340 aa8.47□□□□□ -1.05
HIF1A-208ENST00000556237 HNRNPUQ00839 825 aaKnown RBP eCLIP8.47□□□□□ -1.05
HIF1A-208ENST00000556237 ESCO1Q5FWF5 840 aa8.47□□□□□ -1.05
HIF1A-208ENST00000556237 GPKOWQ92917 476 aaPredicted RBP eCLIP8.47□□□□□ -1.05
HIF1A-208ENST00000556237 KRTAP4-6Q9BYQ5 205 aa8.47□□□□□ -1.05
HIF1A-208ENST00000556237 CPSF1Q10570 1443 aaKnown RBP8.46□□□□□ -1.05
HIF1A-208ENST00000556237 CD163L1Q9NR16 1453 aa8.46□□□□□ -1.05
HIF1A-208ENST00000556237 ATF3P18847 181 aa8.46□□□□□ -1.06
HIF1A-208ENST00000556237 MTHFSP49914 203 aa8.46□□□□□ -1.06
HIF1A-208ENST00000556237 CTDSPL2Q05D32 466 aa8.46□□□□□ -1.06
HIF1A-208ENST00000556237 NME9Q86XW9 330 aa8.46□□□□□ -1.06
HIF1A-208ENST00000556237 TTC21BQ7Z4L5 1316 aa8.46□□□□□ -1.06
HIF1A-208ENST00000556237 NSD2O96028 1365 aa8.46□□□□□ -1.06
HIF1A-208ENST00000556237 ATP7BP35670 1465 aa8.45□□□□□ -1.06
HIF1A-208ENST00000556237 PSME1Q06323 249 aa8.45□□□□□ -1.06
HIF1A-208ENST00000556237 WDR43Q15061 677 aaKnown RBP eCLIP8.45□□□□□ -1.06
HIF1A-208ENST00000556237 COG3Q96JB2 828 aa8.45□□□□□ -1.06
HIF1A-208ENST00000556237 CFAP53Q96M91 514 aa8.45□□□□□ -1.06
HIF1A-208ENST00000556237 ADGRB2O60241 1585 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 FBLN1P23142 703 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 KRT76Q01546 638 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 PTSQ03393 145 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 ERFEQ4G0M1 354 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 ORAI2Q96SN7 254 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 PGPEP1Q9NXJ5 209 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 ADAMTS8Q9UP79 889 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 ZNF335Q9H4Z2 1342 aaPredicted RBP8.44□□□□□ -1.06
HIF1A-208ENST00000556237 TMEM94Q12767 1356 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 EDC4Q6P2E9 1401 aaKnown RBP8.44□□□□□ -1.06
HIF1A-208ENST00000556237 ANKARQ7Z5J8 1434 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 ADGRL3Q9HAR2 1447 aa8.44□□□□□ -1.06
HIF1A-208ENST00000556237 GSK3AP49840 483 aa8.43□□□□□ -1.06
HIF1A-208ENST00000556237 PPP1R26Q5T8A7 1209 aaPredicted RBP8.43□□□□□ -1.06
HIF1A-208ENST00000556237 GPR161Q8N6U8 529 aaKnown RBP8.43□□□□□ -1.06
HIF1A-208ENST00000556237 CNTNAP3BQ96NU0 1288 aa8.43□□□□□ -1.06
HIF1A-208ENST00000556237 CNTNAP3Q9BZ76 1288 aa8.43□□□□□ -1.06
HIF1A-208ENST00000556237 SENP3-EIF4A1A0A087X0R7 540 aa8.42□□□□□ -1.06
HIF1A-208ENST00000556237 RNF225M0QZC1 329 aaPredicted RBP8.42□□□□□ -1.06
HIF1A-208ENST00000556237 PPM1GO15355 546 aaPredicted RBP8.42□□□□□ -1.06
HIF1A-208ENST00000556237 FOXO3O43524 673 aa8.42□□□□□ -1.06
HIF1A-208ENST00000556237 AP1G2O75843 785 aa8.42□□□□□ -1.06
HIF1A-208ENST00000556237 Q6ZVU0 165 aa8.42□□□□□ -1.06
HIF1A-208ENST00000556237 KCTD17Q8N5Z5 321 aa8.42□□□□□ -1.06
HIF1A-208ENST00000556237 TTC21AQ8NDW8 1320 aa8.42□□□□□ -1.06
HIF1A-208ENST00000556237 NCOA3Q9Y6Q9 1424 aa8.42□□□□□ -1.06
HIF1A-208ENST00000556237 STRCQ7RTU9 1775 aa8.42□□□□□ -1.06
HIF1A-208ENST00000556237 NWD1Q149M9 1564 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 CDC42BPGQ6DT37 1551 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 NKTRP30414 1462 aaKnown RBP8.41□□□□□ -1.06
HIF1A-208ENST00000556237 USP6P35125 1406 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 POLR3AO14802 1390 aaPredicted RBP8.41□□□□□ -1.06
HIF1A-208ENST00000556237 MSH6P52701 1360 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 SPINT1O43278 529 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 CBLBQ13191 982 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 SUZ12Q15022 739 aaKnown RBP8.41□□□□□ -1.06
HIF1A-208ENST00000556237 KRT28Q7Z3Y7 464 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 ABTB2Q8N961 1025 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 LRRN4Q8WUT4 740 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 NANOS1Q8WY41 292 aaKnown RBP8.41□□□□□ -1.06
HIF1A-208ENST00000556237 POLKQ9UBT6 870 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 NUDCQ9Y266 331 aa8.41□□□□□ -1.06
HIF1A-208ENST00000556237 NUTM2GQ5VZR2 741 aa8.4□□□□□ -1.06
HIF1A-208ENST00000556237 TMEM151AQ8N4L1 468 aa8.4□□□□□ -1.06
HIF1A-208ENST00000556237 CCDC155Q8N6L0 562 aa8.4□□□□□ -1.06
HIF1A-208ENST00000556237 COL25A1Q9BXS0 654 aaPredicted RBP8.4□□□□□ -1.06
HIF1A-208ENST00000556237 CDV3Q9UKY7 258 aaKnown RBP8.4□□□□□ -1.06
HIF1A-208ENST00000556237 RGPD8O14715 1765 aaPredicted RBP8.4□□□□□ -1.07
HIF1A-208ENST00000556237 USP32Q8NFA0 1604 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms