RNA–Protein interactions for RNA: ENST00000550798.1

PPFIA2-221, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-221ENST00000550798 GRIPAP1Q4V328 841 aa15.32■□□□□ 0.04
PPFIA2-221ENST00000550798 CCDC146Q8IYE0 955 aa15.32■□□□□ 0.04
PPFIA2-221ENST00000550798 RBM17Q96I25 401 aaKnown RBP15.32■□□□□ 0.04
PPFIA2-221ENST00000550798 PSMD1Q99460 953 aa15.32■□□□□ 0.04
PPFIA2-221ENST00000550798 NTSR2O95665 410 aa15.31■□□□□ 0.04
PPFIA2-221ENST00000550798 JDP2Q8WYK2 163 aa15.31■□□□□ 0.04
PPFIA2-221ENST00000550798 RUNDC1Q96C34 613 aa15.31■□□□□ 0.04
PPFIA2-221ENST00000550798 HSP90AB3PQ58FF7 597 aa15.3■□□□□ 0.04
PPFIA2-221ENST00000550798 LRP10Q7Z4F1 713 aa15.3■□□□□ 0.04
PPFIA2-221ENST00000550798 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
PPFIA2-221ENST00000550798 CRAMP1Q96RY5 1269 aa15.3■□□□□ 0.04
PPFIA2-221ENST00000550798 UTP14AQ9BVJ6 771 aaKnown RBP15.3■□□□□ 0.04
PPFIA2-221ENST00000550798 ZNF541Q9H0D2 1346 aa15.3■□□□□ 0.04
PPFIA2-221ENST00000550798 SNED1Q8TER0 1413 aa15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 RNF123Q5XPI4 1314 aa15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 FZD9O00144 591 aa15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 PPEF1O14829 653 aaPredicted RBP15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 ANXA1P04083 346 aa15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 POTEIP0CG38 1075 aa15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 POTEJP0CG39 1038 aa15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 PROSER3Q2NL68 480 aa15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 LDHDQ86WU2 507 aa15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 TMX4Q9H1E5 349 aaPredicted RBP15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 TAF1DQ9H5J8 278 aaPredicted RBP15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 HACL1Q9UJ83 578 aa15.29■□□□□ 0.04
PPFIA2-221ENST00000550798 CHL1O00533 1208 aa15.28■□□□□ 0.04
PPFIA2-221ENST00000550798 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
PPFIA2-221ENST00000550798 SLC10A5Q5PT55 438 aa15.28■□□□□ 0.04
PPFIA2-221ENST00000550798 COPS6Q7L5N1 327 aa15.28■□□□□ 0.04
PPFIA2-221ENST00000550798 GPC2Q8N158 579 aa15.28■□□□□ 0.04
PPFIA2-221ENST00000550798 NECTIN2Q92692 538 aa15.28■□□□□ 0.04
PPFIA2-221ENST00000550798 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
PPFIA2-221ENST00000550798 EIF6P56537 245 aaKnown RBP15.27■□□□□ 0.04
PPFIA2-221ENST00000550798 EAPPQ56P03 285 aaPredicted RBP15.27■□□□□ 0.04
PPFIA2-221ENST00000550798 PNMA8AQ86V59 439 aaPredicted RBP15.27■□□□□ 0.04
PPFIA2-221ENST00000550798 XAGE3Q8WTP9 111 aa15.27■□□□□ 0.04
PPFIA2-221ENST00000550798 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.04
PPFIA2-221ENST00000550798 CREBZFQ9NS37 354 aa15.27■□□□□ 0.04
PPFIA2-221ENST00000550798 TRIM35Q9UPQ4 493 aa15.27■□□□□ 0.04
PPFIA2-221ENST00000550798 LAMB2P55268 1798 aa15.26■□□□□ 0.03
PPFIA2-221ENST00000550798 TCERG1O14776 1098 aaKnown RBP15.26■□□□□ 0.03
PPFIA2-221ENST00000550798 EPHX2P34913 555 aa15.26■□□□□ 0.03
PPFIA2-221ENST00000550798 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
PPFIA2-221ENST00000550798 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
PPFIA2-221ENST00000550798 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
PPFIA2-221ENST00000550798 HOXB7P09629 217 aa15.25■□□□□ 0.03
PPFIA2-221ENST00000550798 TCIRG1Q13488 830 aa15.25■□□□□ 0.03
PPFIA2-221ENST00000550798 NLRP10Q86W26 655 aa15.25■□□□□ 0.03
PPFIA2-221ENST00000550798 LARGE2Q8N3Y3 721 aa15.25■□□□□ 0.03
PPFIA2-221ENST00000550798 ADAMTSL1Q8N6G6 1762 aa15.25■□□□□ 0.03
PPFIA2-221ENST00000550798 PASKQ96RG2 1323 aa15.24■□□□□ 0.03
PPFIA2-221ENST00000550798 KRT24Q2M2I5 525 aa15.24■□□□□ 0.03
PPFIA2-221ENST00000550798 HDGFL1Q5TGJ6 251 aa15.24■□□□□ 0.03
PPFIA2-221ENST00000550798 VPS33BQ9H267 617 aa15.24■□□□□ 0.03
PPFIA2-221ENST00000550798 PRKRIP1Q9H875 184 aaPredicted RBP15.24■□□□□ 0.03
PPFIA2-221ENST00000550798 CHPF2Q9P2E5 772 aa15.24■□□□□ 0.03
PPFIA2-221ENST00000550798 TRMT112Q9UI30 125 aaKnown RBP15.24■□□□□ 0.03
PPFIA2-221ENST00000550798 ATP6V0A2Q9Y487 856 aa15.24■□□□□ 0.03
PPFIA2-221ENST00000550798 GJA3Q9Y6H8 435 aa15.24■□□□□ 0.03
PPFIA2-221ENST00000550798 ABCC4O15439 1325 aa15.23■□□□□ 0.03
PPFIA2-221ENST00000550798 SH3TC1Q8TE82 1336 aa15.23■□□□□ 0.03
PPFIA2-221ENST00000550798 COL4A5P29400 1685 aa15.23■□□□□ 0.03
PPFIA2-221ENST00000550798 BBOX1O75936 387 aa15.23■□□□□ 0.03
PPFIA2-221ENST00000550798 LMOD1P29536 600 aaPredicted RBP15.23■□□□□ 0.03
PPFIA2-221ENST00000550798 NIM1KQ8IY84 436 aa15.23■□□□□ 0.03
PPFIA2-221ENST00000550798 SUPT20HQ8NEM7 779 aa15.23■□□□□ 0.03
PPFIA2-221ENST00000550798 CFAP44Q96MT7 982 aa15.23■□□□□ 0.03
PPFIA2-221ENST00000550798 DBF4Q9UBU7 674 aaPredicted RBP15.23■□□□□ 0.03
PPFIA2-221ENST00000550798 PPIP5K2O43314 1243 aa15.22■□□□□ 0.03
PPFIA2-221ENST00000550798 HSPA1AP0DMV8 641 aaKnown RBP15.22■□□□□ 0.03
PPFIA2-221ENST00000550798 HSPA1BP0DMV9 641 aaKnown RBP15.22■□□□□ 0.03
PPFIA2-221ENST00000550798 HCLS1P14317 486 aaPredicted RBP15.22■□□□□ 0.03
PPFIA2-221ENST00000550798 DDX46Q7L014 1031 aaKnown RBP15.22■□□□□ 0.03
PPFIA2-221ENST00000550798 PLBD2Q8NHP8 589 aa15.22■□□□□ 0.03
PPFIA2-221ENST00000550798 MKRN1Q9UHC7 482 aaKnown RBP15.22■□□□□ 0.03
PPFIA2-221ENST00000550798 TMEM88BA6NKF7 163 aa15.21■□□□□ 0.03
PPFIA2-221ENST00000550798 ITGBL1O95965 494 aaPredicted RBP15.21■□□□□ 0.03
PPFIA2-221ENST00000550798 COL13A1Q5TAT6 717 aaPredicted RBP15.21■□□□□ 0.03
PPFIA2-221ENST00000550798 ANKRD13DQ6ZTN6 518 aa15.21■□□□□ 0.03
PPFIA2-221ENST00000550798 SP8Q8IXZ3 490 aa15.21■□□□□ 0.03
PPFIA2-221ENST00000550798 CALD1Q05682 793 aaKnown RBP15.2■□□□□ 0.02
PPFIA2-221ENST00000550798 AOC3Q16853 763 aa15.2■□□□□ 0.02
PPFIA2-221ENST00000550798 DUSP27Q5VZP5 1158 aa15.2■□□□□ 0.02
PPFIA2-221ENST00000550798 DPP8Q6V1X1 898 aaPredicted RBP15.2■□□□□ 0.02
PPFIA2-221ENST00000550798 CNTROBQ8N137 903 aa15.2■□□□□ 0.02
PPFIA2-221ENST00000550798 HYPKQ9NX55 129 aa15.2■□□□□ 0.02
PPFIA2-221ENST00000550798 CNTNAP1P78357 1384 aa15.2■□□□□ 0.02
PPFIA2-221ENST00000550798 LTBP1Q14766 1721 aa15.2■□□□□ 0.02
PPFIA2-221ENST00000550798 DDX60Q8IY21 1712 aaKnown RBP15.2■□□□□ 0.02
PPFIA2-221ENST00000550798 TAF1P21675 1872 aa15.19■□□□□ 0.02
PPFIA2-221ENST00000550798 GRAPQ13588 217 aa15.19■□□□□ 0.02
PPFIA2-221ENST00000550798 MAP1SQ66K74 1059 aaPredicted RBP15.19■□□□□ 0.02
PPFIA2-221ENST00000550798 TMC4Q7Z404 712 aa15.19■□□□□ 0.02
PPFIA2-221ENST00000550798 SLC51AQ86UW1 340 aa15.19■□□□□ 0.02
PPFIA2-221ENST00000550798 MPNDQ8N594 471 aa15.19■□□□□ 0.02
PPFIA2-221ENST00000550798 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
PPFIA2-221ENST00000550798 RTFDC1Q9BY42 306 aaPredicted RBP15.19■□□□□ 0.02
PPFIA2-221ENST00000550798 MBIPQ9NS73 344 aa15.19■□□□□ 0.02
PPFIA2-221ENST00000550798 APAF1O14727 1248 aa15.18■□□□□ 0.02
PPFIA2-221ENST00000550798 SCNN1DP51172 638 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms