RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 COL13A1Q5TAT6 717 aaPredicted RBP27.16■■□□□ 1.94
CACNB3-218ENST00000550771 LRP10Q7Z4F1 713 aa27.16■■□□□ 1.94
CACNB3-218ENST00000550771 NTSR2O95665 410 aa27.15■■□□□ 1.94
CACNB3-218ENST00000550771 PARP10Q53GL7 1025 aa27.15■■□□□ 1.94
CACNB3-218ENST00000550771 PPP1R42Q7Z4L9 355 aa27.15■■□□□ 1.94
CACNB3-218ENST00000550771 CRAMP1Q96RY5 1269 aa27.15■■□□□ 1.94
CACNB3-218ENST00000550771 HACL1Q9UJ83 578 aa27.15■■□□□ 1.94
CACNB3-218ENST00000550771 TMPOP42166 694 aaKnown RBP27.14■■□□□ 1.94
CACNB3-218ENST00000550771 PDIA6Q15084 440 aa27.14■■□□□ 1.94
CACNB3-218ENST00000550771 JDP2Q8WYK2 163 aa27.14■■□□□ 1.94
CACNB3-218ENST00000550771 RBM17Q96I25 401 aaKnown RBP27.14■■□□□ 1.94
CACNB3-218ENST00000550771 PASKQ96RG2 1323 aa27.14■■□□□ 1.93
CACNB3-218ENST00000550771 HSPA1AP0DMV8 641 aaKnown RBP27.13■■□□□ 1.93
CACNB3-218ENST00000550771 HSPA1BP0DMV9 641 aaKnown RBP27.13■■□□□ 1.93
CACNB3-218ENST00000550771 EIF2S2P20042 333 aaKnown RBP27.13■■□□□ 1.93
CACNB3-218ENST00000550771 GPC2Q8N158 579 aa27.13■■□□□ 1.93
CACNB3-218ENST00000550771 EPHX2P34913 555 aa27.12■■□□□ 1.93
CACNB3-218ENST00000550771 PCNTO95613 3336 aa27.11■■□□□ 1.93
CACNB3-218ENST00000550771 PNMA8AQ86V59 439 aaPredicted RBP27.11■■□□□ 1.93
CACNB3-218ENST00000550771 EAPPQ56P03 285 aaPredicted RBP27.1■■□□□ 1.93
CACNB3-218ENST00000550771 SLC10A5Q5PT55 438 aa27.1■■□□□ 1.93
CACNB3-218ENST00000550771 NLRP3Q96P20 1036 aa27.1■■□□□ 1.93
CACNB3-218ENST00000550771 PPEF1O14829 653 aaPredicted RBP27.09■■□□□ 1.93
CACNB3-218ENST00000550771 ITGBL1O95965 494 aaPredicted RBP27.09■■□□□ 1.93
CACNB3-218ENST00000550771 PROSER3Q2NL68 480 aa27.09■■□□□ 1.93
CACNB3-218ENST00000550771 UTP14AQ9BVJ6 771 aaKnown RBP27.09■■□□□ 1.93
CACNB3-218ENST00000550771 MKRN1Q9UHC7 482 aaKnown RBP27.09■■□□□ 1.93
CACNB3-218ENST00000550771 RNF123Q5XPI4 1314 aa27.09■■□□□ 1.93
CACNB3-218ENST00000550771 EIF6P56537 245 aaKnown RBP27.08■■□□□ 1.93
CACNB3-218ENST00000550771 C3orf67Q6ZVT6 689 aa27.08■■□□□ 1.93
CACNB3-218ENST00000550771 MYBBP1AQ9BQG0 1328 aaKnown RBP27.08■■□□□ 1.93
CACNB3-218ENST00000550771 HSP90AB3PQ58FF7 597 aa27.07■■□□□ 1.92
CACNB3-218ENST00000550771 CLEC11AQ9Y240 323 aa27.07■■□□□ 1.92
CACNB3-218ENST00000550771 ANXA1P04083 346 aa27.06■■□□□ 1.92
CACNB3-218ENST00000550771 LARGE2Q8N3Y3 721 aa27.06■■□□□ 1.92
CACNB3-218ENST00000550771 CNTNAP1P78357 1384 aa27.06■■□□□ 1.92
CACNB3-218ENST00000550771 TMEM88BA6NKF7 163 aa27.05■■□□□ 1.92
CACNB3-218ENST00000550771 COPS6Q7L5N1 327 aa27.05■■□□□ 1.92
CACNB3-218ENST00000550771 TMX4Q9H1E5 349 aaPredicted RBP27.05■■□□□ 1.92
CACNB3-218ENST00000550771 CHL1O00533 1208 aa27.04■■□□□ 1.92
CACNB3-218ENST00000550771 TNS4Q8IZW8 715 aa27.04■■□□□ 1.92
CACNB3-218ENST00000550771 ATP6V0A2Q9Y487 856 aa27.04■■□□□ 1.92
CACNB3-218ENST00000550771 COL4A5P29400 1685 aa27.04■■□□□ 1.92
CACNB3-218ENST00000550771 ADAMTSL1Q8N6G6 1762 aa27.04■■□□□ 1.92
CACNB3-218ENST00000550771 DDX10Q13206 875 aaKnown RBP27.03■■□□□ 1.92
CACNB3-218ENST00000550771 CNTROBQ8N137 903 aa27.03■■□□□ 1.92
CACNB3-218ENST00000550771 XAGE3Q8WTP9 111 aa27.03■■□□□ 1.92
CACNB3-218ENST00000550771 VPS33BQ9H267 617 aa27.03■■□□□ 1.92
CACNB3-218ENST00000550771 DDX21Q9NR30 783 aaKnown RBP eCLIP27.03■■□□□ 1.92
CACNB3-218ENST00000550771 TCERG1O14776 1098 aaKnown RBP27.02■■□□□ 1.92
CACNB3-218ENST00000550771 NLRP10Q86W26 655 aa27.02■■□□□ 1.92
CACNB3-218ENST00000550771 CCDC146Q8IYE0 955 aa27.02■■□□□ 1.92
CACNB3-218ENST00000550771 RUNDC1Q96C34 613 aa27.02■■□□□ 1.92
CACNB3-218ENST00000550771 GJA3Q9Y6H8 435 aa27.02■■□□□ 1.92
CACNB3-218ENST00000550771 LMOD1P29536 600 aaPredicted RBP27.01■■□□□ 1.91
CACNB3-218ENST00000550771 TCIRG1Q13488 830 aa27.01■■□□□ 1.91
CACNB3-218ENST00000550771 NEUROD2Q15784 382 aa27.01■■□□□ 1.91
CACNB3-218ENST00000550771 NIM1KQ8IY84 436 aa27.01■■□□□ 1.91
CACNB3-218ENST00000550771 NECTIN2Q92692 538 aa27.01■■□□□ 1.91
CACNB3-218ENST00000550771 ABCC4O15439 1325 aa27■■□□□ 1.91
CACNB3-218ENST00000550771 BBOX1O75936 387 aa27■■□□□ 1.91
CACNB3-218ENST00000550771 AIMP1Q12904 312 aaKnown RBP27■■□□□ 1.91
CACNB3-218ENST00000550771 MAP1SQ66K74 1059 aaPredicted RBP27■■□□□ 1.91
CACNB3-218ENST00000550771 SLC51AQ86UW1 340 aa27■■□□□ 1.91
CACNB3-218ENST00000550771 TRIM35Q9UPQ4 493 aa27■■□□□ 1.91
CACNB3-218ENST00000550771 PPIP5K2O43314 1243 aa26.99■■□□□ 1.91
CACNB3-218ENST00000550771 SCNN1DP51172 638 aa26.99■■□□□ 1.91
CACNB3-218ENST00000550771 WDR43Q15061 677 aaKnown RBP eCLIP26.99■■□□□ 1.91
CACNB3-218ENST00000550771 KRT24Q2M2I5 525 aa26.98■■□□□ 1.91
CACNB3-218ENST00000550771 SUPT20HQ8NEM7 779 aa26.98■■□□□ 1.91
CACNB3-218ENST00000550771 RTFDC1Q9BY42 306 aaPredicted RBP26.98■■□□□ 1.91
CACNB3-218ENST00000550771 HOXB7P09629 217 aa26.97■■□□□ 1.91
CACNB3-218ENST00000550771 SP8Q8IXZ3 490 aa26.97■■□□□ 1.91
CACNB3-218ENST00000550771 TRMT112Q9UI30 125 aaKnown RBP26.97■■□□□ 1.91
CACNB3-218ENST00000550771 SH3TC1Q8TE82 1336 aa26.96■■□□□ 1.91
CACNB3-218ENST00000550771 HCLS1P14317 486 aaPredicted RBP26.96■■□□□ 1.91
CACNB3-218ENST00000550771 LAS1LQ9Y4W2 734 aaKnown RBP26.96■■□□□ 1.91
CACNB3-218ENST00000550771 EPS15P42566 896 aa26.95■■□□□ 1.9
CACNB3-218ENST00000550771 VEGFBP49765 207 aa26.95■■□□□ 1.9
CACNB3-218ENST00000550771 AOC3Q16853 763 aa26.95■■□□□ 1.9
CACNB3-218ENST00000550771 USP50Q70EL3 339 aaPredicted RBP26.95■■□□□ 1.9
CACNB3-218ENST00000550771 CHPF2Q9P2E5 772 aa26.95■■□□□ 1.9
CACNB3-218ENST00000550771 RASSF10A6NK89 507 aa26.94■■□□□ 1.9
CACNB3-218ENST00000550771 HDGFL1Q5TGJ6 251 aa26.94■■□□□ 1.9
CACNB3-218ENST00000550771 DDX46Q7L014 1031 aaKnown RBP26.94■■□□□ 1.9
CACNB3-218ENST00000550771 ZNRF3Q9ULT6 936 aa26.94■■□□□ 1.9
CACNB3-218ENST00000550771 ADAMTS8Q9UP79 889 aa26.94■■□□□ 1.9
CACNB3-218ENST00000550771 LTBP1Q14766 1721 aa26.93■■□□□ 1.9
CACNB3-218ENST00000550771 DPP8Q6V1X1 898 aaPredicted RBP26.93■■□□□ 1.9
CACNB3-218ENST00000550771 PLBD2Q8NHP8 589 aa26.93■■□□□ 1.9
CACNB3-218ENST00000550771 ANKRD36CQ5JPF3 1778 aa26.93■■□□□ 1.9
CACNB3-218ENST00000550771 GRAPQ13588 217 aa26.92■■□□□ 1.9
CACNB3-218ENST00000550771 MPNDQ8N594 471 aa26.92■■□□□ 1.9
CACNB3-218ENST00000550771 GRAPLQ8TC17 118 aaPredicted RBP26.92■■□□□ 1.9
CACNB3-218ENST00000550771 CFAP44Q96MT7 982 aa26.92■■□□□ 1.9
CACNB3-218ENST00000550771 DBF4Q9UBU7 674 aaPredicted RBP26.92■■□□□ 1.9
CACNB3-218ENST00000550771 DEFB115Q30KQ5 88 aa26.91■■□□□ 1.9
CACNB3-218ENST00000550771 ANKRD13DQ6ZTN6 518 aa26.91■■□□□ 1.9
CACNB3-218ENST00000550771 TMC4Q7Z404 712 aa26.91■■□□□ 1.9
CACNB3-218ENST00000550771 FOXN1O15353 648 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms