RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 TAF1DQ9H5J8 278 aaPredicted RBP14.28□□□□□ -0.12
PFDN5-210ENST00000550513 THSD7BQ9C0I4 1608 aa14.27□□□□□ -0.12
PFDN5-210ENST00000550513 RNF123Q5XPI4 1314 aa14.27□□□□□ -0.12
PFDN5-210ENST00000550513 NTSR2O95665 410 aa14.27□□□□□ -0.13
PFDN5-210ENST00000550513 LMOD3Q0VAK6 560 aa14.27□□□□□ -0.13
PFDN5-210ENST00000550513 EAPPQ56P03 285 aaPredicted RBP14.27□□□□□ -0.13
PFDN5-210ENST00000550513 GIGYF2Q6Y7W6 1299 aaKnown RBP14.27□□□□□ -0.13
PFDN5-210ENST00000550513 SYNE4Q8N205 404 aa14.27□□□□□ -0.13
PFDN5-210ENST00000550513 HACL1Q9UJ83 578 aa14.27□□□□□ -0.13
PFDN5-210ENST00000550513 PASKQ96RG2 1323 aa14.26□□□□□ -0.13
PFDN5-210ENST00000550513 FZD9O00144 591 aa14.26□□□□□ -0.13
PFDN5-210ENST00000550513 PPEF1O14829 653 aaPredicted RBP14.26□□□□□ -0.13
PFDN5-210ENST00000550513 RIPK4P57078 832 aa14.26□□□□□ -0.13
PFDN5-210ENST00000550513 RALBP1Q15311 655 aa14.26□□□□□ -0.13
PFDN5-210ENST00000550513 SUSD4Q5VX71 490 aa14.26□□□□□ -0.13
PFDN5-210ENST00000550513 CC2D2BQ6DHV5 1058 aa14.26□□□□□ -0.13
PFDN5-210ENST00000550513 ZNF34Q8IZ26 560 aa14.26□□□□□ -0.13
PFDN5-210ENST00000550513 JDP2Q8WYK2 163 aa14.26□□□□□ -0.13
PFDN5-210ENST00000550513 CNTNAP1P78357 1384 aa14.25□□□□□ -0.13
PFDN5-210ENST00000550513 EIF2S2P20042 333 aaKnown RBP14.25□□□□□ -0.13
PFDN5-210ENST00000550513 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
PFDN5-210ENST00000550513 EPHX2P34913 555 aa14.25□□□□□ -0.13
PFDN5-210ENST00000550513 PARP10Q53GL7 1025 aa14.25□□□□□ -0.13
PFDN5-210ENST00000550513 PPP1R42Q7Z4L9 355 aa14.25□□□□□ -0.13
PFDN5-210ENST00000550513 GPC2Q8N158 579 aa14.25□□□□□ -0.13
PFDN5-210ENST00000550513 RBM17Q96I25 401 aaKnown RBP14.25□□□□□ -0.13
PFDN5-210ENST00000550513 MKRN1Q9UHC7 482 aaKnown RBP14.25□□□□□ -0.13
PFDN5-210ENST00000550513 TMPOP42166 694 aaKnown RBP14.24□□□□□ -0.13
PFDN5-210ENST00000550513 GRIPAP1Q4V328 841 aa14.24□□□□□ -0.13
PFDN5-210ENST00000550513 LRP10Q7Z4F1 713 aa14.24□□□□□ -0.13
PFDN5-210ENST00000550513 CRAMP1Q96RY5 1269 aa14.24□□□□□ -0.13
PFDN5-210ENST00000550513 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
PFDN5-210ENST00000550513 MYH3P11055 1940 aa14.23□□□□□ -0.13
PFDN5-210ENST00000550513 MYBBP1AQ9BQG0 1328 aaKnown RBP14.23□□□□□ -0.13
PFDN5-210ENST00000550513 SPEF2Q9C093 1822 aa14.23□□□□□ -0.13
PFDN5-210ENST00000550513 ANXA1P04083 346 aa14.23□□□□□ -0.13
PFDN5-210ENST00000550513 EIF6P56537 245 aaKnown RBP14.23□□□□□ -0.13
PFDN5-210ENST00000550513 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
PFDN5-210ENST00000550513 PNMA8AQ86V59 439 aaPredicted RBP14.23□□□□□ -0.13
PFDN5-210ENST00000550513 TNS4Q8IZW8 715 aa14.23□□□□□ -0.13
PFDN5-210ENST00000550513 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
PFDN5-210ENST00000550513 DUOX1Q9NRD9 1551 aa14.22□□□□□ -0.13
PFDN5-210ENST00000550513 TCERG1O14776 1098 aaKnown RBP14.22□□□□□ -0.13
PFDN5-210ENST00000550513 PDIA6Q15084 440 aa14.22□□□□□ -0.13
PFDN5-210ENST00000550513 C3orf67Q6ZVT6 689 aa14.22□□□□□ -0.13
PFDN5-210ENST00000550513 SLC51AQ86UW1 340 aa14.22□□□□□ -0.13
PFDN5-210ENST00000550513 LARGE2Q8N3Y3 721 aa14.22□□□□□ -0.13
PFDN5-210ENST00000550513 NLRP3Q96P20 1036 aa14.22□□□□□ -0.13
PFDN5-210ENST00000550513 UTP14AQ9BVJ6 771 aaKnown RBP14.22□□□□□ -0.13
PFDN5-210ENST00000550513 GJA3Q9Y6H8 435 aa14.22□□□□□ -0.13
PFDN5-210ENST00000550513 ABCC4O15439 1325 aa14.21□□□□□ -0.13
PFDN5-210ENST00000550513 PSME4Q14997 1843 aa14.21□□□□□ -0.13
PFDN5-210ENST00000550513 TMEM88BA6NKF7 163 aa14.21□□□□□ -0.13
PFDN5-210ENST00000550513 ITGBL1O95965 494 aaPredicted RBP14.21□□□□□ -0.13
PFDN5-210ENST00000550513 LMOD1P29536 600 aaPredicted RBP14.21□□□□□ -0.13
PFDN5-210ENST00000550513 HSP90AB3PQ58FF7 597 aa14.21□□□□□ -0.13
PFDN5-210ENST00000550513 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
PFDN5-210ENST00000550513 NECTIN2Q92692 538 aa14.21□□□□□ -0.13
PFDN5-210ENST00000550513 TMX4Q9H1E5 349 aaPredicted RBP14.21□□□□□ -0.13
PFDN5-210ENST00000550513 NEUROD2Q15784 382 aa14.2□□□□□ -0.14
PFDN5-210ENST00000550513 MAP1SQ66K74 1059 aaPredicted RBP14.2□□□□□ -0.14
PFDN5-210ENST00000550513 NIM1KQ8IY84 436 aa14.2□□□□□ -0.14
PFDN5-210ENST00000550513 PPIP5K2O43314 1243 aa14.19□□□□□ -0.14
PFDN5-210ENST00000550513 CAPN15O75808 1086 aa14.19□□□□□ -0.14
PFDN5-210ENST00000550513 SCNN1DP51172 638 aa14.19□□□□□ -0.14
PFDN5-210ENST00000550513 AIMP1Q12904 312 aaKnown RBP14.19□□□□□ -0.14
PFDN5-210ENST00000550513 WDR43Q15061 677 aaKnown RBP eCLIP14.19□□□□□ -0.14
PFDN5-210ENST00000550513 COPS6Q7L5N1 327 aa14.19□□□□□ -0.14
PFDN5-210ENST00000550513 XAGE3Q8WTP9 111 aa14.19□□□□□ -0.14
PFDN5-210ENST00000550513 ATP6V0A2Q9Y487 856 aa14.19□□□□□ -0.14
PFDN5-210ENST00000550513 COL4A1P02462 1669 aa14.18□□□□□ -0.14
PFDN5-210ENST00000550513 AOC3Q16853 763 aa14.18□□□□□ -0.14
PFDN5-210ENST00000550513 KRT24Q2M2I5 525 aa14.18□□□□□ -0.14
PFDN5-210ENST00000550513 SLC10A5Q5PT55 438 aa14.18□□□□□ -0.14
PFDN5-210ENST00000550513 NLRP10Q86W26 655 aa14.18□□□□□ -0.14
PFDN5-210ENST00000550513 CNTROBQ8N137 903 aa14.18□□□□□ -0.14
PFDN5-210ENST00000550513 RUNDC1Q96C34 613 aa14.18□□□□□ -0.14
PFDN5-210ENST00000550513 DDX21Q9NR30 783 aaKnown RBP eCLIP14.18□□□□□ -0.14
PFDN5-210ENST00000550513 LAS1LQ9Y4W2 734 aaKnown RBP14.18□□□□□ -0.14
PFDN5-210ENST00000550513 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
PFDN5-210ENST00000550513 SUPT20HQ8NEM7 779 aa14.17□□□□□ -0.14
PFDN5-210ENST00000550513 CHPF2Q9P2E5 772 aa14.17□□□□□ -0.14
PFDN5-210ENST00000550513 TRMT112Q9UI30 125 aaKnown RBP14.17□□□□□ -0.14
PFDN5-210ENST00000550513 SH3TC1Q8TE82 1336 aa14.16□□□□□ -0.14
PFDN5-210ENST00000550513 POLR2AP24928 1970 aaKnown RBP14.16□□□□□ -0.14
PFDN5-210ENST00000550513 CHL1O00533 1208 aa14.16□□□□□ -0.14
PFDN5-210ENST00000550513 VEGFBP49765 207 aa14.16□□□□□ -0.14
PFDN5-210ENST00000550513 TCIRG1Q13488 830 aa14.16□□□□□ -0.14
PFDN5-210ENST00000550513 HDGFL1Q5TGJ6 251 aa14.16□□□□□ -0.14
PFDN5-210ENST00000550513 AIDAQ96BJ3 306 aa14.16□□□□□ -0.14
PFDN5-210ENST00000550513 VPS33BQ9H267 617 aa14.16□□□□□ -0.14
PFDN5-210ENST00000550513 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
PFDN5-210ENST00000550513 SCN9AQ15858 1988 aa14.16□□□□□ -0.14
PFDN5-210ENST00000550513 RASSF10A6NK89 507 aa14.15□□□□□ -0.14
PFDN5-210ENST00000550513 FOXN1O15353 648 aa14.15□□□□□ -0.14
PFDN5-210ENST00000550513 HOXB7P09629 217 aa14.15□□□□□ -0.14
PFDN5-210ENST00000550513 HCLS1P14317 486 aaPredicted RBP14.15□□□□□ -0.14
PFDN5-210ENST00000550513 EPS15P42566 896 aa14.15□□□□□ -0.14
PFDN5-210ENST00000550513 DPP8Q6V1X1 898 aaPredicted RBP14.15□□□□□ -0.14
PFDN5-210ENST00000550513 USP50Q70EL3 339 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms