RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	IARS	P41252	1262 aa	Known RBP	31.2	■■■□□ 2.59
RAP1B-233	ENST00000545720	PROSER3	Q2NL68	480 aa		31.2	■■■□□ 2.59
RAP1B-233	ENST00000545720	LRP10	Q7Z4F1	713 aa		31.2	■■■□□ 2.59
RAP1B-233	ENST00000545720	PDIA6	Q15084	440 aa		31.19	■■■□□ 2.58
RAP1B-233	ENST00000545720	NEUROD2	Q15784	382 aa		31.19	■■■□□ 2.58
RAP1B-233	ENST00000545720	BABAM1	Q9NWV8	329 aa		31.19	■■■□□ 2.58
RAP1B-233	ENST00000545720	TAF1D	Q9H5J8	278 aa	Predicted RBP	31.18	■■■□□ 2.58
RAP1B-233	ENST00000545720	HOXA10	P31260	410 aa	Predicted RBP	31.17	■■■□□ 2.58
RAP1B-233	ENST00000545720	PPP1R42	Q7Z4L9	355 aa		31.17	■■■□□ 2.58
RAP1B-233	ENST00000545720	NECTIN2	Q92692	538 aa		31.17	■■■□□ 2.58
RAP1B-233	ENST00000545720	PARP10	Q53GL7	1025 aa		31.16	■■■□□ 2.58
RAP1B-233	ENST00000545720	PSMD1	Q99460	953 aa		31.16	■■■□□ 2.58
RAP1B-233	ENST00000545720	COL4A5	P29400	1685 aa		31.16	■■■□□ 2.58
RAP1B-233	ENST00000545720	ADAMTSL1	Q8N6G6	1762 aa		31.15	■■■□□ 2.58
RAP1B-233	ENST00000545720	CC2D2B	Q6DHV5	1058 aa		31.15	■■■□□ 2.58
RAP1B-233	ENST00000545720	C3orf67	Q6ZVT6	689 aa		31.15	■■■□□ 2.58
RAP1B-233	ENST00000545720	LDHD	Q86WU2	507 aa		31.15	■■■□□ 2.58
RAP1B-233	ENST00000545720	RBM17	Q96I25	401 aa	Known RBP	31.14	■■■□□ 2.58
RAP1B-233	ENST00000545720	FZD9	O00144	591 aa		31.13	■■■□□ 2.57
RAP1B-233	ENST00000545720	SLC51A	Q86UW1	340 aa		31.13	■■■□□ 2.57
RAP1B-233	ENST00000545720	CRAMP1	Q96RY5	1269 aa		31.13	■■■□□ 2.57
RAP1B-233	ENST00000545720	TCERG1	O14776	1098 aa	Known RBP	31.12	■■■□□ 2.57
RAP1B-233	ENST00000545720	PPEF1	O14829	653 aa	Predicted RBP	31.12	■■■□□ 2.57
RAP1B-233	ENST00000545720	WDR43	Q15061	677 aa	Known RBP eCLIP	31.12	■■■□□ 2.57
RAP1B-233	ENST00000545720	EAPP	Q56P03	285 aa	Predicted RBP	31.12	■■■□□ 2.57
RAP1B-233	ENST00000545720	JDP2	Q8WYK2	163 aa		31.12	■■■□□ 2.57
RAP1B-233	ENST00000545720	HACL1	Q9UJ83	578 aa		31.12	■■■□□ 2.57
RAP1B-233	ENST00000545720	RNF123	Q5XPI4	1314 aa		31.12	■■■□□ 2.57
RAP1B-233	ENST00000545720	TAF1	P21675	1872 aa		31.11	■■■□□ 2.57
RAP1B-233	ENST00000545720	AIMP1	Q12904	312 aa	Known RBP	31.11	■■■□□ 2.57
RAP1B-233	ENST00000545720	KRT24	Q2M2I5	525 aa		31.11	■■■□□ 2.57
RAP1B-233	ENST00000545720	UTP14A	Q9BVJ6	771 aa	Known RBP	31.11	■■■□□ 2.57
RAP1B-233	ENST00000545720	CREBZF	Q9NS37	354 aa		31.11	■■■□□ 2.57
RAP1B-233	ENST00000545720	LAS1L	Q9Y4W2	734 aa	Known RBP	31.11	■■■□□ 2.57
RAP1B-233	ENST00000545720	COPS6	Q7L5N1	327 aa		31.1	■■■□□ 2.57
RAP1B-233	ENST00000545720	RUNDC1	Q96C34	613 aa		31.1	■■■□□ 2.57
RAP1B-233	ENST00000545720	NLRP3	Q96P20	1036 aa		31.1	■■■□□ 2.57
RAP1B-233	ENST00000545720	EPHX2	P34913	555 aa		31.09	■■■□□ 2.57
RAP1B-233	ENST00000545720	XAGE3	Q8WTP9	111 aa		31.09	■■■□□ 2.57
RAP1B-233	ENST00000545720	TRIM35	Q9UPQ4	493 aa		31.09	■■■□□ 2.57
RAP1B-233	ENST00000545720	CHL1	O00533	1208 aa		31.08	■■■□□ 2.57
RAP1B-233	ENST00000545720	COL13A1	Q5TAT6	717 aa	Predicted RBP	31.08	■■■□□ 2.57
RAP1B-233	ENST00000545720	GPC2	Q8N158	579 aa		31.08	■■■□□ 2.57
RAP1B-233	ENST00000545720	LTBP1	Q14766	1721 aa		31.07	■■■□□ 2.56
RAP1B-233	ENST00000545720	PASK	Q96RG2	1323 aa		31.07	■■■□□ 2.56
RAP1B-233	ENST00000545720	GRIPAP1	Q4V328	841 aa		31.07	■■■□□ 2.56
RAP1B-233	ENST00000545720	MKRN1	Q9UHC7	482 aa	Known RBP	31.07	■■■□□ 2.56
RAP1B-233	ENST00000545720	CLEC11A	Q9Y240	323 aa		31.07	■■■□□ 2.56
RAP1B-233	ENST00000545720	HSPA1A	P0DMV8	641 aa	Known RBP	31.06	■■■□□ 2.56
RAP1B-233	ENST00000545720	HSPA1B	P0DMV9	641 aa	Known RBP	31.06	■■■□□ 2.56
RAP1B-233	ENST00000545720	EIF6	P56537	245 aa	Known RBP	31.06	■■■□□ 2.56
RAP1B-233	ENST00000545720	HSP90AB3P	Q58FF7	597 aa		31.06	■■■□□ 2.56
RAP1B-233	ENST00000545720	LARGE2	Q8N3Y3	721 aa		31.06	■■■□□ 2.56
RAP1B-233	ENST00000545720	DDX60	Q8IY21	1712 aa	Known RBP	31.05	■■■□□ 2.56
RAP1B-233	ENST00000545720	SLC10A5	Q5PT55	438 aa		31.05	■■■□□ 2.56
RAP1B-233	ENST00000545720	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.05	■■■□□ 2.56
RAP1B-233	ENST00000545720	ADAMTS8	Q9UP79	889 aa		31.05	■■■□□ 2.56
RAP1B-233	ENST00000545720	GJA3	Q9Y6H8	435 aa		31.05	■■■□□ 2.56
RAP1B-233	ENST00000545720	ABCC4	O15439	1325 aa		31.04	■■■□□ 2.56
RAP1B-233	ENST00000545720	NLRP10	Q86W26	655 aa		31.04	■■■□□ 2.56
RAP1B-233	ENST00000545720	CHPF2	Q9P2E5	772 aa		31.04	■■■□□ 2.56
RAP1B-233	ENST00000545720	TCIRG1	Q13488	830 aa		31.02	■■■□□ 2.56
RAP1B-233	ENST00000545720	PNMA8A	Q86V59	439 aa	Predicted RBP	31.02	■■■□□ 2.56
RAP1B-233	ENST00000545720	TMX4	Q9H1E5	349 aa	Predicted RBP	31.02	■■■□□ 2.56
RAP1B-233	ENST00000545720	ITGBL1	O95965	494 aa	Predicted RBP	31.01	■■■□□ 2.55
RAP1B-233	ENST00000545720	HCLS1	P14317	486 aa	Predicted RBP	31.01	■■■□□ 2.55
RAP1B-233	ENST00000545720	HDGFL1	Q5TGJ6	251 aa		31.01	■■■□□ 2.55
RAP1B-233	ENST00000545720	ATP6V0A2	Q9Y487	856 aa		31.01	■■■□□ 2.55
RAP1B-233	ENST00000545720	NIM1K	Q8IY84	436 aa		31	■■■□□ 2.55
RAP1B-233	ENST00000545720	ZNF428	Q96B54	188 aa		31	■■■□□ 2.55
RAP1B-233	ENST00000545720	TRMT112	Q9UI30	125 aa	Known RBP	31	■■■□□ 2.55
RAP1B-233	ENST00000545720	PPIP5K2	O43314	1243 aa		30.99	■■■□□ 2.55
RAP1B-233	ENST00000545720	MAP1S	Q66K74	1059 aa	Predicted RBP	30.99	■■■□□ 2.55
RAP1B-233	ENST00000545720	CNTNAP1	P78357	1384 aa		30.99	■■■□□ 2.55
RAP1B-233	ENST00000545720	SH3TC1	Q8TE82	1336 aa		30.98	■■■□□ 2.55
RAP1B-233	ENST00000545720	LMOD1	P29536	600 aa	Predicted RBP	30.98	■■■□□ 2.55
RAP1B-233	ENST00000545720	AOC3	Q16853	763 aa		30.98	■■■□□ 2.55
RAP1B-233	ENST00000545720	TMEM88B	A6NKF7	163 aa		30.97	■■■□□ 2.55
RAP1B-233	ENST00000545720	LRRC37A	A6NMS7	1700 aa		30.96	■■■□□ 2.55
RAP1B-233	ENST00000545720	TRPM7	Q96QT4	1865 aa		30.96	■■■□□ 2.55
RAP1B-233	ENST00000545720	HOXB7	P09629	217 aa		30.96	■■■□□ 2.55
RAP1B-233	ENST00000545720	CNTROB	Q8N137	903 aa		30.96	■■■□□ 2.55
RAP1B-233	ENST00000545720	PRKRIP1	Q9H875	184 aa	Predicted RBP	30.96	■■■□□ 2.55
RAP1B-233	ENST00000545720	SCNN1D	P51172	638 aa		30.95	■■■□□ 2.55
RAP1B-233	ENST00000545720	PLBD2	Q8NHP8	589 aa		30.95	■■■□□ 2.55
RAP1B-233	ENST00000545720	CFAP44	Q96MT7	982 aa		30.95	■■■□□ 2.55
RAP1B-233	ENST00000545720	DDX46	Q7L014	1031 aa	Known RBP	30.94	■■■□□ 2.54
RAP1B-233	ENST00000545720	DBF4	Q9UBU7	674 aa	Predicted RBP	30.94	■■■□□ 2.54
RAP1B-233	ENST00000545720	BBOX1	O75936	387 aa		30.93	■■■□□ 2.54
RAP1B-233	ENST00000545720	EPS15	P42566	896 aa		30.93	■■■□□ 2.54
RAP1B-233	ENST00000545720	DUSP27	Q5VZP5	1158 aa		30.93	■■■□□ 2.54
RAP1B-233	ENST00000545720	TNS4	Q8IZW8	715 aa		30.93	■■■□□ 2.54
RAP1B-233	ENST00000545720	SUPT20H	Q8NEM7	779 aa		30.93	■■■□□ 2.54
RAP1B-233	ENST00000545720	MBIP	Q9NS73	344 aa		30.93	■■■□□ 2.54
RAP1B-233	ENST00000545720	DPP8	Q6V1X1	898 aa	Predicted RBP	30.92	■■■□□ 2.54
RAP1B-233	ENST00000545720	ANKRD13D	Q6ZTN6	518 aa		30.92	■■■□□ 2.54
RAP1B-233	ENST00000545720	SP8	Q8IXZ3	490 aa		30.92	■■■□□ 2.54
RAP1B-233	ENST00000545720	GRAP	Q13588	217 aa		30.91	■■■□□ 2.54
RAP1B-233	ENST00000545720	MPND	Q8N594	471 aa		30.91	■■■□□ 2.54
RAP1B-233	ENST00000545720	GRAPL	Q8TC17	118 aa	Predicted RBP	30.91	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms