RNA–Protein interactions for RNA: ENST00000544539.5

PHC1-213, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-213ENST00000544539 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
PHC1-213ENST00000544539 KDM3BQ7LBC6 1761 aa18.34■□□□□ 0.53
PHC1-213ENST00000544539 TMEM88BA6NKF7 163 aa18.33■□□□□ 0.52
PHC1-213ENST00000544539 FZD9O00144 591 aa18.33■□□□□ 0.52
PHC1-213ENST00000544539 GPTP24298 496 aa18.33■□□□□ 0.52
PHC1-213ENST00000544539 HSP90AB3PQ58FF7 597 aa18.33■□□□□ 0.52
PHC1-213ENST00000544539 CRAMP1Q96RY5 1269 aa18.33■□□□□ 0.52
PHC1-213ENST00000544539 RNF123Q5XPI4 1314 aa18.32■□□□□ 0.52
PHC1-213ENST00000544539 DLG5Q8TDM6 1919 aa18.32■□□□□ 0.52
PHC1-213ENST00000544539 RIPK4P57078 832 aa18.32■□□□□ 0.52
PHC1-213ENST00000544539 TTLL7Q6ZT98 887 aa18.32■□□□□ 0.52
PHC1-213ENST00000544539 AIDAQ96BJ3 306 aa18.32■□□□□ 0.52
PHC1-213ENST00000544539 VPS33BQ9H267 617 aa18.32■□□□□ 0.52
PHC1-213ENST00000544539 MKRN1Q9UHC7 482 aaKnown RBP18.32■□□□□ 0.52
PHC1-213ENST00000544539 ZNF541Q9H0D2 1346 aa18.31■□□□□ 0.52
PHC1-213ENST00000544539 PPEF1O14829 653 aaPredicted RBP18.31■□□□□ 0.52
PHC1-213ENST00000544539 ZNF34Q8IZ26 560 aa18.31■□□□□ 0.52
PHC1-213ENST00000544539 LARGE2Q8N3Y3 721 aa18.31■□□□□ 0.52
PHC1-213ENST00000544539 SUPT20HQ8NEM7 779 aa18.31■□□□□ 0.52
PHC1-213ENST00000544539 THUMPD2Q9BTF0 503 aaKnown RBP18.31■□□□□ 0.52
PHC1-213ENST00000544539 UTP14AQ9BVJ6 771 aaKnown RBP18.31■□□□□ 0.52
PHC1-213ENST00000544539 NUP98P52948 1817 aa18.3■□□□□ 0.52
PHC1-213ENST00000544539 POTEIP0CG38 1075 aa18.3■□□□□ 0.52
PHC1-213ENST00000544539 POTEJP0CG39 1038 aa18.3■□□□□ 0.52
PHC1-213ENST00000544539 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
PHC1-213ENST00000544539 SUSD4Q5VX71 490 aa18.3■□□□□ 0.52
PHC1-213ENST00000544539 ABCC12Q96J65 1359 aa18.3■□□□□ 0.52
PHC1-213ENST00000544539 PASKQ96RG2 1323 aa18.29■□□□□ 0.52
PHC1-213ENST00000544539 OLFM4Q6UX06 510 aa18.29■□□□□ 0.52
PHC1-213ENST00000544539 NIM1KQ8IY84 436 aa18.29■□□□□ 0.52
PHC1-213ENST00000544539 GJA3Q9Y6H8 435 aa18.29■□□□□ 0.52
PHC1-213ENST00000544539 CNTNAP1P78357 1384 aa18.29■□□□□ 0.52
PHC1-213ENST00000544539 UBN2Q6ZU65 1347 aa18.28■□□□□ 0.52
PHC1-213ENST00000544539 NTSR2O95665 410 aa18.28■□□□□ 0.52
PHC1-213ENST00000544539 CNTROBQ8N137 903 aa18.28■□□□□ 0.52
PHC1-213ENST00000544539 BBOX1O75936 387 aa18.26■□□□□ 0.51
PHC1-213ENST00000544539 ITGBL1O95965 494 aaPredicted RBP18.26■□□□□ 0.51
PHC1-213ENST00000544539 TMPOP42166 694 aaKnown RBP18.26■□□□□ 0.51
PHC1-213ENST00000544539 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.51
PHC1-213ENST00000544539 SLC10A5Q5PT55 438 aa18.26■□□□□ 0.51
PHC1-213ENST00000544539 PPIP5K2O43314 1243 aa18.25■□□□□ 0.51
PHC1-213ENST00000544539 USP50Q70EL3 339 aaPredicted RBP18.25■□□□□ 0.51
PHC1-213ENST00000544539 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
PHC1-213ENST00000544539 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
PHC1-213ENST00000544539 CAPN15O75808 1086 aa18.24■□□□□ 0.51
PHC1-213ENST00000544539 CTCFP49711 727 aaPredicted RBP18.24■□□□□ 0.51
PHC1-213ENST00000544539 DEFB115Q30KQ5 88 aa18.24■□□□□ 0.51
PHC1-213ENST00000544539 DDX46Q7L014 1031 aaKnown RBP18.24■□□□□ 0.51
PHC1-213ENST00000544539 TMC4Q7Z404 712 aa18.24■□□□□ 0.51
PHC1-213ENST00000544539 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
PHC1-213ENST00000544539 MAP1SQ66K74 1059 aaPredicted RBP18.23■□□□□ 0.51
PHC1-213ENST00000544539 DDX21Q9NR30 783 aaKnown RBP eCLIP18.23■□□□□ 0.51
PHC1-213ENST00000544539 ABT1Q9ULW3 272 aaKnown RBP18.23■□□□□ 0.51
PHC1-213ENST00000544539 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
PHC1-213ENST00000544539 MAP2K1Q02750 393 aaPredicted RBP18.22■□□□□ 0.51
PHC1-213ENST00000544539 AIMP1Q12904 312 aaKnown RBP18.22■□□□□ 0.51
PHC1-213ENST00000544539 DPP8Q6V1X1 898 aaPredicted RBP18.22■□□□□ 0.51
PHC1-213ENST00000544539 COPS6Q7L5N1 327 aa18.22■□□□□ 0.51
PHC1-213ENST00000544539 PRDM10Q9NQV6 1147 aa18.22■□□□□ 0.51
PHC1-213ENST00000544539 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
PHC1-213ENST00000544539 SNED1Q8TER0 1413 aa18.22■□□□□ 0.51
PHC1-213ENST00000544539 RASSF10A6NK89 507 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 HOXB7P09629 217 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 ECE1P42892 770 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 VEGFBP49765 207 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 TCIRG1Q13488 830 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 TNIP1Q15025 636 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 PDIA6Q15084 440 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 NEUROD2Q15784 382 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 SP8Q8IXZ3 490 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 RUNDC1Q96C34 613 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 ZNRF3Q9ULT6 936 aa18.21■□□□□ 0.51
PHC1-213ENST00000544539 LAS1LQ9Y4W2 734 aaKnown RBP18.21■□□□□ 0.51
PHC1-213ENST00000544539 PCNTO95613 3336 aa18.2■□□□□ 0.5
PHC1-213ENST00000544539 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
PHC1-213ENST00000544539 MPNDQ8N594 471 aa18.2■□□□□ 0.5
PHC1-213ENST00000544539 XAGE3Q8WTP9 111 aa18.2■□□□□ 0.5
PHC1-213ENST00000544539 BEGAINQ9BUH8 593 aa18.2■□□□□ 0.5
PHC1-213ENST00000544539 CHMP4AQ9BY43 222 aa18.2■□□□□ 0.5
PHC1-213ENST00000544539 ADARB2Q9NS39 739 aaKnown RBP18.2■□□□□ 0.5
PHC1-213ENST00000544539 ABCC4O15439 1325 aa18.2■□□□□ 0.5
PHC1-213ENST00000544539 CDHR2Q9BYE9 1310 aa18.2■□□□□ 0.5
PHC1-213ENST00000544539 AOC3Q16853 763 aa18.19■□□□□ 0.5
PHC1-213ENST00000544539 LRP10Q7Z4F1 713 aa18.19■□□□□ 0.5
PHC1-213ENST00000544539 NLRP10Q86W26 655 aa18.19■□□□□ 0.5
PHC1-213ENST00000544539 RTFDC1Q9BY42 306 aaPredicted RBP18.19■□□□□ 0.5
PHC1-213ENST00000544539 DBF4Q9UBU7 674 aaPredicted RBP18.19■□□□□ 0.5
PHC1-213ENST00000544539 ADAMTSL1Q8N6G6 1762 aa18.18■□□□□ 0.5
PHC1-213ENST00000544539 CHL1O00533 1208 aa18.18■□□□□ 0.5
PHC1-213ENST00000544539 SCNN1DP51172 638 aa18.18■□□□□ 0.5
PHC1-213ENST00000544539 GRAPQ13588 217 aa18.18■□□□□ 0.5
PHC1-213ENST00000544539 HDGFL1Q5TGJ6 251 aa18.18■□□□□ 0.5
PHC1-213ENST00000544539 GRAPLQ8TC17 118 aaPredicted RBP18.18■□□□□ 0.5
PHC1-213ENST00000544539 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
PHC1-213ENST00000544539 BCL2L13Q9BXK5 485 aa18.18■□□□□ 0.5
PHC1-213ENST00000544539 FOXN1O15353 648 aa18.17■□□□□ 0.5
PHC1-213ENST00000544539 ANXA1P04083 346 aa18.17■□□□□ 0.5
PHC1-213ENST00000544539 EPS15P42566 896 aa18.17■□□□□ 0.5
PHC1-213ENST00000544539 CALD1Q05682 793 aaKnown RBP18.17■□□□□ 0.5
PHC1-213ENST00000544539 PROSER3Q2NL68 480 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms