RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
RIMKLB-212ENST00000544257 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
RIMKLB-212ENST00000544257 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
RIMKLB-212ENST00000544257 KRT24Q2M2I5 525 aa12.53□□□□□ -0.4
RIMKLB-212ENST00000544257 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
RIMKLB-212ENST00000544257 SENP3-EIF4A1A0A087X0R7 540 aa12.52□□□□□ -0.4
RIMKLB-212ENST00000544257 CAMTA2O94983 1202 aa12.52□□□□□ -0.4
RIMKLB-212ENST00000544257 MMP10P09238 476 aa12.52□□□□□ -0.4
RIMKLB-212ENST00000544257 DZIP3Q86Y13 1208 aaKnown RBP12.52□□□□□ -0.4
RIMKLB-212ENST00000544257 MARVELD3Q96A59 401 aa12.52□□□□□ -0.4
RIMKLB-212ENST00000544257 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.4
RIMKLB-212ENST00000544257 ZNF330Q9Y3S2 320 aaPredicted RBP12.52□□□□□ -0.4
RIMKLB-212ENST00000544257 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.4
RIMKLB-212ENST00000544257 PPP1R37O75864 691 aa12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 EIF2S2P20042 333 aaKnown RBP12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 TM4SF1P30408 202 aa12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 PDIA6Q15084 440 aa12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 HDGFL1Q5TGJ6 251 aa12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 CLEC4GQ6UXB4 293 aa12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 LRP10Q7Z4F1 713 aa12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 DDX21Q9NR30 783 aaKnown RBP eCLIP12.52□□□□□ -0.41
RIMKLB-212ENST00000544257 FANCIQ9NVI1 1328 aa12.51□□□□□ -0.41
RIMKLB-212ENST00000544257 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
RIMKLB-212ENST00000544257 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
RIMKLB-212ENST00000544257 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
RIMKLB-212ENST00000544257 TBC1D2BQ9UPU7 963 aa12.51□□□□□ -0.41
RIMKLB-212ENST00000544257 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
RIMKLB-212ENST00000544257 CD2APQ9Y5K6 639 aa12.51□□□□□ -0.41
RIMKLB-212ENST00000544257 PARP3Q9Y6F1 533 aa12.51□□□□□ -0.41
RIMKLB-212ENST00000544257 ERVV-1B6SEH8 477 aa12.5□□□□□ -0.41
RIMKLB-212ENST00000544257 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
RIMKLB-212ENST00000544257 DBF4Q9UBU7 674 aaPredicted RBP12.5□□□□□ -0.41
RIMKLB-212ENST00000544257 NRXN2Q9P2S2 1712 aa12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 KIF13BQ9NQT8 1826 aa12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 POLRMTO00411 1230 aaKnown RBP12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 MYL6BP14649 208 aa12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 DDR1Q08345 913 aa12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 NFIXQ14938 502 aa12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 SYT17Q9BSW7 474 aa12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 C10orf71Q711Q0 1435 aa12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 MAP3K15Q6ZN16 1313 aa12.49□□□□□ -0.41
RIMKLB-212ENST00000544257 PROSER3Q2NL68 480 aa12.48□□□□□ -0.41
RIMKLB-212ENST00000544257 CCDC30Q5VVM6 783 aa12.48□□□□□ -0.41
RIMKLB-212ENST00000544257 HYPKQ9NX55 129 aa12.48□□□□□ -0.41
RIMKLB-212ENST00000544257 CHPF2Q9P2E5 772 aa12.48□□□□□ -0.41
RIMKLB-212ENST00000544257 CARMIL3Q8ND23 1372 aa12.48□□□□□ -0.41
RIMKLB-212ENST00000544257 E9PSI1 815 aa12.47□□□□□ -0.41
RIMKLB-212ENST00000544257 TWISTNBQ3B726 338 aaPredicted RBP12.47□□□□□ -0.41
RIMKLB-212ENST00000544257 TSPYL6Q8N831 410 aa12.47□□□□□ -0.41
RIMKLB-212ENST00000544257 ATP10DQ9P241 1426 aa12.47□□□□□ -0.41
RIMKLB-212ENST00000544257 ELL2O00472 640 aaPredicted RBP12.47□□□□□ -0.41
RIMKLB-212ENST00000544257 TBC1D9BQ66K14 1250 aa12.47□□□□□ -0.41
RIMKLB-212ENST00000544257 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
RIMKLB-212ENST00000544257 NECTIN2Q92692 538 aa12.47□□□□□ -0.41
RIMKLB-212ENST00000544257 SETDB2Q96T68 719 aa12.47□□□□□ -0.41
RIMKLB-212ENST00000544257 NUP98P52948 1817 aa12.46□□□□□ -0.41
RIMKLB-212ENST00000544257 AFDNP55196 1824 aaKnown RBP12.46□□□□□ -0.41
RIMKLB-212ENST00000544257 RIMBP2O15034 1052 aa12.46□□□□□ -0.42
RIMKLB-212ENST00000544257 EMP3P54852 163 aa12.46□□□□□ -0.42
RIMKLB-212ENST00000544257 ANXA1P04083 346 aa12.45□□□□□ -0.42
RIMKLB-212ENST00000544257 SERPINB2P05120 415 aa12.45□□□□□ -0.42
RIMKLB-212ENST00000544257 TGFB2P61812 414 aa12.45□□□□□ -0.42
RIMKLB-212ENST00000544257 EXOSC9Q06265 439 aaKnown RBP12.45□□□□□ -0.42
RIMKLB-212ENST00000544257 SLFN5Q08AF3 891 aa12.45□□□□□ -0.42
RIMKLB-212ENST00000544257 HLFQ16534 295 aa12.45□□□□□ -0.42
RIMKLB-212ENST00000544257 GIGYF2Q6Y7W6 1299 aaKnown RBP12.45□□□□□ -0.42
RIMKLB-212ENST00000544257 COPS6Q7L5N1 327 aa12.45□□□□□ -0.42
RIMKLB-212ENST00000544257 XAGE3Q8WTP9 111 aa12.45□□□□□ -0.42
RIMKLB-212ENST00000544257 IBTKQ9P2D0 1353 aaPredicted RBP12.45□□□□□ -0.42
RIMKLB-212ENST00000544257 VAMP4O75379 141 aa12.44□□□□□ -0.42
RIMKLB-212ENST00000544257 TRMT2AQ8IZ69 625 aaKnown RBP12.44□□□□□ -0.42
RIMKLB-212ENST00000544257 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
RIMKLB-212ENST00000544257 ZBTB3Q9H5J0 574 aa12.44□□□□□ -0.42
RIMKLB-212ENST00000544257 KIAA1551Q9HCM1 1747 aa12.44□□□□□ -0.42
RIMKLB-212ENST00000544257 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
RIMKLB-212ENST00000544257 C2orf72A6NCS6 295 aa12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 HSP90AB3PQ58FF7 597 aa12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 BICDL1Q6ZP65 573 aa12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 CDAN1Q8IWY9 1227 aa12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 NLGN2Q8NFZ4 835 aa12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 RYDENQ9NUL5 291 aaKnown RBP12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 PXDNLA1KZ92 1463 aa12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 ANKRD13DQ6ZTN6 518 aa12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 ZNF34Q8IZ26 560 aa12.43□□□□□ -0.42
RIMKLB-212ENST00000544257 AIMP1Q12904 312 aaKnown RBP12.42□□□□□ -0.42
RIMKLB-212ENST00000544257 PARP10Q53GL7 1025 aa12.42□□□□□ -0.42
RIMKLB-212ENST00000544257 PRR5LQ6MZQ0 368 aa12.42□□□□□ -0.42
RIMKLB-212ENST00000544257 CNBD1Q8NA66 436 aa12.42□□□□□ -0.42
RIMKLB-212ENST00000544257 ZNF428Q96B54 188 aa12.42□□□□□ -0.42
RIMKLB-212ENST00000544257 NYXQ9GZU5 481 aa12.42□□□□□ -0.42
RIMKLB-212ENST00000544257 PDZRN3Q9UPQ7 1066 aa12.42□□□□□ -0.42
RIMKLB-212ENST00000544257 KIF3CO14782 793 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms