RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 RIC1Q4ADV7 1423 aa20.41■□□□□ 0.86
CSF1R-209ENST00000543093 CAPN15O75808 1086 aa20.4■□□□□ 0.86
CSF1R-209ENST00000543093 EPHX2P34913 555 aa20.4■□□□□ 0.86
CSF1R-209ENST00000543093 ERBB4Q15303 1308 aa20.4■□□□□ 0.86
CSF1R-209ENST00000543093 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
CSF1R-209ENST00000543093 PSMD1Q99460 953 aa20.4■□□□□ 0.86
CSF1R-209ENST00000543093 TSPYL4Q9UJ04 414 aa20.4■□□□□ 0.86
CSF1R-209ENST00000543093 COL4A5P29400 1685 aa20.39■□□□□ 0.86
CSF1R-209ENST00000543093 HOXA10P31260 410 aaPredicted RBP20.39■□□□□ 0.85
CSF1R-209ENST00000543093 CC2D2BQ6DHV5 1058 aa20.39■□□□□ 0.85
CSF1R-209ENST00000543093 ZNF34Q8IZ26 560 aa20.39■□□□□ 0.85
CSF1R-209ENST00000543093 JDP2Q8WYK2 163 aa20.39■□□□□ 0.85
CSF1R-209ENST00000543093 CNTNAP1P78357 1384 aa20.38■□□□□ 0.85
CSF1R-209ENST00000543093 PCNTO95613 3336 aa20.38■□□□□ 0.85
CSF1R-209ENST00000543093 NTSR2O95665 410 aa20.38■□□□□ 0.85
CSF1R-209ENST00000543093 ITGBL1O95965 494 aaPredicted RBP20.38■□□□□ 0.85
CSF1R-209ENST00000543093 GIGYF2Q6Y7W6 1299 aaKnown RBP20.38■□□□□ 0.85
CSF1R-209ENST00000543093 GPC2Q8N158 579 aa20.38■□□□□ 0.85
CSF1R-209ENST00000543093 MYBBP1AQ9BQG0 1328 aaKnown RBP20.37■□□□□ 0.85
CSF1R-209ENST00000543093 PNMA8AQ86V59 439 aaPredicted RBP20.37■□□□□ 0.85
CSF1R-209ENST00000543093 RBM17Q96I25 401 aaKnown RBP20.37■□□□□ 0.85
CSF1R-209ENST00000543093 TMEM88BA6NKF7 163 aa20.36■□□□□ 0.85
CSF1R-209ENST00000543093 TCERG1O14776 1098 aaKnown RBP20.36■□□□□ 0.85
CSF1R-209ENST00000543093 PPEF1O14829 653 aaPredicted RBP20.36■□□□□ 0.85
CSF1R-209ENST00000543093 EIF2S2P20042 333 aaKnown RBP20.36■□□□□ 0.85
CSF1R-209ENST00000543093 RIPK4P57078 832 aa20.36■□□□□ 0.85
CSF1R-209ENST00000543093 C3orf67Q6ZVT6 689 aa20.36■□□□□ 0.85
CSF1R-209ENST00000543093 PPP1R42Q7Z4L9 355 aa20.36■□□□□ 0.85
CSF1R-209ENST00000543093 SLC51AQ86UW1 340 aa20.36■□□□□ 0.85
CSF1R-209ENST00000543093 CRAMP1Q96RY5 1269 aa20.36■□□□□ 0.85
CSF1R-209ENST00000543093 GJA3Q9Y6H8 435 aa20.36■□□□□ 0.85
CSF1R-209ENST00000543093 ANKRD36CQ5JPF3 1778 aa20.36■□□□□ 0.85
CSF1R-209ENST00000543093 EIF6P56537 245 aaKnown RBP20.35■□□□□ 0.85
CSF1R-209ENST00000543093 PDIA6Q15084 440 aa20.35■□□□□ 0.85
CSF1R-209ENST00000543093 PARP10Q53GL7 1025 aa20.35■□□□□ 0.85
CSF1R-209ENST00000543093 LTBP1Q14766 1721 aa20.34■□□□□ 0.85
CSF1R-209ENST00000543093 ANXA1P04083 346 aa20.34■□□□□ 0.85
CSF1R-209ENST00000543093 MAP1SQ66K74 1059 aaPredicted RBP20.34■□□□□ 0.85
CSF1R-209ENST00000543093 LRP10Q7Z4F1 713 aa20.34■□□□□ 0.85
CSF1R-209ENST00000543093 LARGE2Q8N3Y3 721 aa20.34■□□□□ 0.85
CSF1R-209ENST00000543093 LAMB2P55268 1798 aa20.34■□□□□ 0.85
CSF1R-209ENST00000543093 PROSER3Q2NL68 480 aa20.33■□□□□ 0.85
CSF1R-209ENST00000543093 GRIPAP1Q4V328 841 aa20.33■□□□□ 0.85
CSF1R-209ENST00000543093 CNTROBQ8N137 903 aa20.33■□□□□ 0.85
CSF1R-209ENST00000543093 TMPOP42166 694 aaKnown RBP20.32■□□□□ 0.84
CSF1R-209ENST00000543093 NLRP3Q96P20 1036 aa20.32■□□□□ 0.84
CSF1R-209ENST00000543093 UTP14AQ9BVJ6 771 aaKnown RBP20.32■□□□□ 0.84
CSF1R-209ENST00000543093 LMOD1P29536 600 aaPredicted RBP20.31■□□□□ 0.84
CSF1R-209ENST00000543093 VEGFBP49765 207 aa20.31■□□□□ 0.84
CSF1R-209ENST00000543093 NECTIN2Q92692 538 aa20.31■□□□□ 0.84
CSF1R-209ENST00000543093 BABAM1Q9NWV8 329 aa20.31■□□□□ 0.84
CSF1R-209ENST00000543093 FOXN1O15353 648 aa20.3■□□□□ 0.84
CSF1R-209ENST00000543093 LMOD3Q0VAK6 560 aa20.3■□□□□ 0.84
CSF1R-209ENST00000543093 SLC10A5Q5PT55 438 aa20.3■□□□□ 0.84
CSF1R-209ENST00000543093 TMX4Q9H1E5 349 aaPredicted RBP20.3■□□□□ 0.84
CSF1R-209ENST00000543093 PPIP5K2O43314 1243 aa20.29■□□□□ 0.84
CSF1R-209ENST00000543093 SCNN1DP51172 638 aa20.29■□□□□ 0.84
CSF1R-209ENST00000543093 AIMP1Q12904 312 aaKnown RBP20.29■□□□□ 0.84
CSF1R-209ENST00000543093 NIM1KQ8IY84 436 aa20.29■□□□□ 0.84
CSF1R-209ENST00000543093 ATP6V0A2Q9Y487 856 aa20.29■□□□□ 0.84
CSF1R-209ENST00000543093 ABCC4O15439 1325 aa20.28■□□□□ 0.84
CSF1R-209ENST00000543093 EPS15P42566 896 aa20.28■□□□□ 0.84
CSF1R-209ENST00000543093 COPS6Q7L5N1 327 aa20.28■□□□□ 0.84
CSF1R-209ENST00000543093 XAGE3Q8WTP9 111 aa20.28■□□□□ 0.84
CSF1R-209ENST00000543093 NEUROD2Q15784 382 aa20.27■□□□□ 0.84
CSF1R-209ENST00000543093 AOC3Q16853 763 aa20.27■□□□□ 0.84
CSF1R-209ENST00000543093 HSP90AB3PQ58FF7 597 aa20.27■□□□□ 0.84
CSF1R-209ENST00000543093 NLRP10Q86W26 655 aa20.27■□□□□ 0.84
CSF1R-209ENST00000543093 CCDC146Q8IYE0 955 aa20.27■□□□□ 0.84
CSF1R-209ENST00000543093 AIDAQ96BJ3 306 aa20.27■□□□□ 0.84
CSF1R-209ENST00000543093 RASSF10A6NK89 507 aa20.26■□□□□ 0.83
CSF1R-209ENST00000543093 HCLS1P14317 486 aaPredicted RBP20.26■□□□□ 0.83
CSF1R-209ENST00000543093 DEFB115Q30KQ5 88 aa20.26■□□□□ 0.83
CSF1R-209ENST00000543093 PRKRIP1Q9H875 184 aaPredicted RBP20.26■□□□□ 0.83
CSF1R-209ENST00000543093 ABT1Q9ULW3 272 aaKnown RBP20.26■□□□□ 0.83
CSF1R-209ENST00000543093 TAF1P21675 1872 aa20.26■□□□□ 0.83
CSF1R-209ENST00000543093 TRPM7Q96QT4 1865 aa20.25■□□□□ 0.83
CSF1R-209ENST00000543093 KRT24Q2M2I5 525 aa20.25■□□□□ 0.83
CSF1R-209ENST00000543093 DDX21Q9NR30 783 aaKnown RBP eCLIP20.25■□□□□ 0.83
CSF1R-209ENST00000543093 LAS1LQ9Y4W2 734 aaKnown RBP20.25■□□□□ 0.83
CSF1R-209ENST00000543093 CTCFP49711 727 aaPredicted RBP20.24■□□□□ 0.83
CSF1R-209ENST00000543093 TCIRG1Q13488 830 aa20.24■□□□□ 0.83
CSF1R-209ENST00000543093 USP50Q70EL3 339 aaPredicted RBP20.24■□□□□ 0.83
CSF1R-209ENST00000543093 SUPT20HQ8NEM7 779 aa20.24■□□□□ 0.83
CSF1R-209ENST00000543093 VPS33BQ9H267 617 aa20.24■□□□□ 0.83
CSF1R-209ENST00000543093 TRMT112Q9UI30 125 aaKnown RBP20.24■□□□□ 0.83
CSF1R-209ENST00000543093 CHL1O00533 1208 aa20.23■□□□□ 0.83
CSF1R-209ENST00000543093 BBOX1O75936 387 aa20.23■□□□□ 0.83
CSF1R-209ENST00000543093 FMR1Q06787 632 aaKnown RBP eCLIP20.23■□□□□ 0.83
CSF1R-209ENST00000543093 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
CSF1R-209ENST00000543093 DPP8Q6V1X1 898 aaPredicted RBP20.23■□□□□ 0.83
CSF1R-209ENST00000543093 SP8Q8IXZ3 490 aa20.23■□□□□ 0.83
CSF1R-209ENST00000543093 RTFDC1Q9BY42 306 aaPredicted RBP20.23■□□□□ 0.83
CSF1R-209ENST00000543093 PRDM10Q9NQV6 1147 aa20.23■□□□□ 0.83
CSF1R-209ENST00000543093 WBP1LQ9NX94 342 aa20.23■□□□□ 0.83
CSF1R-209ENST00000543093 ZNRF3Q9ULT6 936 aa20.23■□□□□ 0.83
CSF1R-209ENST00000543093 SH3TC1Q8TE82 1336 aa20.23■□□□□ 0.83
CSF1R-209ENST00000543093 DDX60Q8IY21 1712 aaKnown RBP20.22■□□□□ 0.83
CSF1R-209ENST00000543093 DDX46Q7L014 1031 aaKnown RBP20.22■□□□□ 0.83
CSF1R-209ENST00000543093 MPNDQ8N594 471 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms