RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 NTSR2O95665 410 aa31.51■■■□□ 2.63
LEMD3-203ENST00000541171 HOXA10P31260 410 aaPredicted RBP31.51■■■□□ 2.63
LEMD3-203ENST00000541171 TMPOP42166 694 aaKnown RBP31.51■■■□□ 2.63
LEMD3-203ENST00000541171 PPP1R42Q7Z4L9 355 aa31.51■■■□□ 2.63
LEMD3-203ENST00000541171 JDP2Q8WYK2 163 aa31.51■■■□□ 2.63
LEMD3-203ENST00000541171 RBM17Q96I25 401 aaKnown RBP31.51■■■□□ 2.63
LEMD3-203ENST00000541171 PSMD1Q99460 953 aa31.51■■■□□ 2.63
LEMD3-203ENST00000541171 IBTKQ9P2D0 1353 aaPredicted RBP31.51■■■□□ 2.63
LEMD3-203ENST00000541171 PDIA6Q15084 440 aa31.5■■■□□ 2.63
LEMD3-203ENST00000541171 CC2D2BQ6DHV5 1058 aa31.5■■■□□ 2.63
LEMD3-203ENST00000541171 NECTIN2Q92692 538 aa31.5■■■□□ 2.63
LEMD3-203ENST00000541171 NEUROD2Q15784 382 aa31.49■■■□□ 2.63
LEMD3-203ENST00000541171 PROSER3Q2NL68 480 aa31.49■■■□□ 2.63
LEMD3-203ENST00000541171 C3orf67Q6ZVT6 689 aa31.49■■■□□ 2.63
LEMD3-203ENST00000541171 SCN4AP35499 1836 aa31.49■■■□□ 2.63
LEMD3-203ENST00000541171 RNF123Q5XPI4 1314 aa31.49■■■□□ 2.63
LEMD3-203ENST00000541171 EPHX2P34913 555 aa31.48■■■□□ 2.63
LEMD3-203ENST00000541171 LMOD3Q0VAK6 560 aa31.48■■■□□ 2.63
LEMD3-203ENST00000541171 PARP10Q53GL7 1025 aa31.48■■■□□ 2.63
LEMD3-203ENST00000541171 LRP10Q7Z4F1 713 aa31.48■■■□□ 2.63
LEMD3-203ENST00000541171 SLC51AQ86UW1 340 aa31.48■■■□□ 2.63
LEMD3-203ENST00000541171 CCDC146Q8IYE0 955 aa31.48■■■□□ 2.63
LEMD3-203ENST00000541171 PCNTO95613 3336 aa31.48■■■□□ 2.63
LEMD3-203ENST00000541171 PPEF1O14829 653 aaPredicted RBP31.47■■■□□ 2.63
LEMD3-203ENST00000541171 DDX10Q13206 875 aaKnown RBP31.47■■■□□ 2.63
LEMD3-203ENST00000541171 CRAMP1Q96RY5 1269 aa31.47■■■□□ 2.63
LEMD3-203ENST00000541171 GJA3Q9Y6H8 435 aa31.47■■■□□ 2.63
LEMD3-203ENST00000541171 RIC1Q4ADV7 1423 aa31.47■■■□□ 2.63
LEMD3-203ENST00000541171 SNED1Q8TER0 1413 aa31.47■■■□□ 2.63
LEMD3-203ENST00000541171 NLRP3Q96P20 1036 aa31.46■■■□□ 2.63
LEMD3-203ENST00000541171 UTP14AQ9BVJ6 771 aaKnown RBP31.46■■■□□ 2.63
LEMD3-203ENST00000541171 BABAM1Q9NWV8 329 aa31.46■■■□□ 2.63
LEMD3-203ENST00000541171 PASKQ96RG2 1323 aa31.46■■■□□ 2.63
LEMD3-203ENST00000541171 EIF6P56537 245 aaKnown RBP31.45■■■□□ 2.63
LEMD3-203ENST00000541171 AIMP1Q12904 312 aaKnown RBP31.45■■■□□ 2.63
LEMD3-203ENST00000541171 GPC2Q8N158 579 aa31.45■■■□□ 2.63
LEMD3-203ENST00000541171 TNS4Q8IZW8 715 aa31.44■■■□□ 2.62
LEMD3-203ENST00000541171 LARGE2Q8N3Y3 721 aa31.44■■■□□ 2.62
LEMD3-203ENST00000541171 COPS6Q7L5N1 327 aa31.43■■■□□ 2.62
LEMD3-203ENST00000541171 LAS1LQ9Y4W2 734 aaKnown RBP31.43■■■□□ 2.62
LEMD3-203ENST00000541171 ITGBL1O95965 494 aaPredicted RBP31.42■■■□□ 2.62
LEMD3-203ENST00000541171 GRIPAP1Q4V328 841 aa31.42■■■□□ 2.62
LEMD3-203ENST00000541171 PNMA8AQ86V59 439 aaPredicted RBP31.42■■■□□ 2.62
LEMD3-203ENST00000541171 XAGE3Q8WTP9 111 aa31.42■■■□□ 2.62
LEMD3-203ENST00000541171 MAP1SQ66K74 1059 aaPredicted RBP31.41■■■□□ 2.62
LEMD3-203ENST00000541171 TMX4Q9H1E5 349 aaPredicted RBP31.41■■■□□ 2.62
LEMD3-203ENST00000541171 MYBBP1AQ9BQG0 1328 aaKnown RBP31.41■■■□□ 2.62
LEMD3-203ENST00000541171 CAPN15O75808 1086 aa31.4■■■□□ 2.62
LEMD3-203ENST00000541171 KRT24Q2M2I5 525 aa31.4■■■□□ 2.62
LEMD3-203ENST00000541171 SLC10A5Q5PT55 438 aa31.4■■■□□ 2.62
LEMD3-203ENST00000541171 COL4A5P29400 1685 aa31.4■■■□□ 2.62
LEMD3-203ENST00000541171 TMEM88BA6NKF7 163 aa31.39■■■□□ 2.62
LEMD3-203ENST00000541171 CNTROBQ8N137 903 aa31.39■■■□□ 2.62
LEMD3-203ENST00000541171 CNTNAP1P78357 1384 aa31.38■■■□□ 2.61
LEMD3-203ENST00000541171 LMOD1P29536 600 aaPredicted RBP31.37■■■□□ 2.61
LEMD3-203ENST00000541171 WDR43Q15061 677 aaKnown RBP eCLIP31.37■■■□□ 2.61
LEMD3-203ENST00000541171 HSP90AB3PQ58FF7 597 aa31.37■■■□□ 2.61
LEMD3-203ENST00000541171 ABCC4O15439 1325 aa31.36■■■□□ 2.61
LEMD3-203ENST00000541171 CHL1O00533 1208 aa31.36■■■□□ 2.61
LEMD3-203ENST00000541171 PPIP5K2O43314 1243 aa31.36■■■□□ 2.61
LEMD3-203ENST00000541171 HCLS1P14317 486 aaPredicted RBP31.36■■■□□ 2.61
LEMD3-203ENST00000541171 NLRP10Q86W26 655 aa31.36■■■□□ 2.61
LEMD3-203ENST00000541171 NIM1KQ8IY84 436 aa31.36■■■□□ 2.61
LEMD3-203ENST00000541171 ZNF428Q96B54 188 aa31.36■■■□□ 2.61
LEMD3-203ENST00000541171 RUNDC1Q96C34 613 aa31.36■■■□□ 2.61
LEMD3-203ENST00000541171 ATP6V0A2Q9Y487 856 aa31.36■■■□□ 2.61
LEMD3-203ENST00000541171 DDX21Q9NR30 783 aaKnown RBP eCLIP31.35■■■□□ 2.61
LEMD3-203ENST00000541171 EPS15P42566 896 aa31.34■■■□□ 2.61
LEMD3-203ENST00000541171 TCIRG1Q13488 830 aa31.34■■■□□ 2.61
LEMD3-203ENST00000541171 AOC3Q16853 763 aa31.34■■■□□ 2.61
LEMD3-203ENST00000541171 TRMT112Q9UI30 125 aaKnown RBP31.34■■■□□ 2.61
LEMD3-203ENST00000541171 TRIM35Q9UPQ4 493 aa31.34■■■□□ 2.61
LEMD3-203ENST00000541171 VEGFBP49765 207 aa31.33■■■□□ 2.61
LEMD3-203ENST00000541171 ADAMTSL1Q8N6G6 1762 aa31.33■■■□□ 2.61
LEMD3-203ENST00000541171 SCNN1DP51172 638 aa31.32■■■□□ 2.6
LEMD3-203ENST00000541171 CHPF2Q9P2E5 772 aa31.32■■■□□ 2.6
LEMD3-203ENST00000541171 ADAMTS8Q9UP79 889 aa31.31■■■□□ 2.6
LEMD3-203ENST00000541171 HDGFL1Q5TGJ6 251 aa31.3■■■□□ 2.6
LEMD3-203ENST00000541171 SH3TC1Q8TE82 1336 aa31.29■■■□□ 2.6
LEMD3-203ENST00000541171 BBOX1O75936 387 aa31.29■■■□□ 2.6
LEMD3-203ENST00000541171 DPP8Q6V1X1 898 aaPredicted RBP31.29■■■□□ 2.6
LEMD3-203ENST00000541171 DDX46Q7L014 1031 aaKnown RBP31.29■■■□□ 2.6
LEMD3-203ENST00000541171 SUPT20HQ8NEM7 779 aa31.29■■■□□ 2.6
LEMD3-203ENST00000541171 LTBP1Q14766 1721 aa31.28■■■□□ 2.6
LEMD3-203ENST00000541171 SP8Q8IXZ3 490 aa31.28■■■□□ 2.6
LEMD3-203ENST00000541171 FOXN1O15353 648 aa31.27■■■□□ 2.6
LEMD3-203ENST00000541171 MPNDQ8N594 471 aa31.27■■■□□ 2.6
LEMD3-203ENST00000541171 VPS33BQ9H267 617 aa31.27■■■□□ 2.6
LEMD3-203ENST00000541171 DEFB115Q30KQ5 88 aa31.26■■■□□ 2.59
LEMD3-203ENST00000541171 ZNRF3Q9ULT6 936 aa31.26■■■□□ 2.59
LEMD3-203ENST00000541171 ABT1Q9ULW3 272 aaKnown RBP31.26■■■□□ 2.59
LEMD3-203ENST00000541171 ANKRD36CQ5JPF3 1778 aa31.25■■■□□ 2.59
LEMD3-203ENST00000541171 FMR1Q06787 632 aaKnown RBP eCLIP31.25■■■□□ 2.59
LEMD3-203ENST00000541171 PLBD2Q8NHP8 589 aa31.25■■■□□ 2.59
LEMD3-203ENST00000541171 RTFDC1Q9BY42 306 aaPredicted RBP31.25■■■□□ 2.59
LEMD3-203ENST00000541171 CXCL9Q07325 125 aa31.24■■■□□ 2.59
LEMD3-203ENST00000541171 GRAPQ13588 217 aa31.24■■■□□ 2.59
LEMD3-203ENST00000541171 ANKRD13DQ6ZTN6 518 aa31.24■■■□□ 2.59
LEMD3-203ENST00000541171 USP50Q70EL3 339 aaPredicted RBP31.24■■■□□ 2.59
LEMD3-203ENST00000541171 GRAPLQ8TC17 118 aaPredicted RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms