RNA–Protein interactions for RNA: ENST00000538979.5

SCNN1A-212, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 771 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-212ENST00000538979 SYNE4Q8N205 404 aa19.35■□□□□ 0.69
SCNN1A-212ENST00000538979 PLEKHF1Q96S99 279 aa19.35■□□□□ 0.69
SCNN1A-212ENST00000538979 ZBTB3Q9H5J0 574 aa19.35■□□□□ 0.69
SCNN1A-212ENST00000538979 RNF123Q5XPI4 1314 aa19.34■□□□□ 0.69
SCNN1A-212ENST00000538979 ZNF541Q9H0D2 1346 aa19.34■□□□□ 0.69
SCNN1A-212ENST00000538979 FZD9O00144 591 aa19.34■□□□□ 0.69
SCNN1A-212ENST00000538979 GPTP24298 496 aa19.34■□□□□ 0.69
SCNN1A-212ENST00000538979 GIGYF2Q6Y7W6 1299 aaKnown RBP19.34■□□□□ 0.69
SCNN1A-212ENST00000538979 AIDAQ96BJ3 306 aa19.34■□□□□ 0.69
SCNN1A-212ENST00000538979 BABAM1Q9NWV8 329 aa19.34■□□□□ 0.69
SCNN1A-212ENST00000538979 MKRN1Q9UHC7 482 aaKnown RBP19.34■□□□□ 0.69
SCNN1A-212ENST00000538979 CNTNAP1P78357 1384 aa19.33■□□□□ 0.69
SCNN1A-212ENST00000538979 TMEM88BA6NKF7 163 aa19.33■□□□□ 0.68
SCNN1A-212ENST00000538979 POTEIP0CG38 1075 aa19.33■□□□□ 0.68
SCNN1A-212ENST00000538979 POTEJP0CG39 1038 aa19.33■□□□□ 0.68
SCNN1A-212ENST00000538979 HOXA10P31260 410 aaPredicted RBP19.33■□□□□ 0.68
SCNN1A-212ENST00000538979 NLRP3Q96P20 1036 aa19.33■□□□□ 0.68
SCNN1A-212ENST00000538979 LAMB2P55268 1798 aa19.32■□□□□ 0.68
SCNN1A-212ENST00000538979 PASKQ96RG2 1323 aa19.32■□□□□ 0.68
SCNN1A-212ENST00000538979 PPEF1O14829 653 aaPredicted RBP19.32■□□□□ 0.68
SCNN1A-212ENST00000538979 RALBP1Q15311 655 aa19.32■□□□□ 0.68
SCNN1A-212ENST00000538979 HSP90AB3PQ58FF7 597 aa19.32■□□□□ 0.68
SCNN1A-212ENST00000538979 CRAMP1Q96RY5 1269 aa19.32■□□□□ 0.68
SCNN1A-212ENST00000538979 TRPM7Q96QT4 1865 aa19.31■□□□□ 0.68
SCNN1A-212ENST00000538979 RIPK4P57078 832 aa19.31■□□□□ 0.68
SCNN1A-212ENST00000538979 TTLL7Q6ZT98 887 aa19.31■□□□□ 0.68
SCNN1A-212ENST00000538979 LARGE2Q8N3Y3 721 aa19.31■□□□□ 0.68
SCNN1A-212ENST00000538979 THUMPD2Q9BTF0 503 aaKnown RBP19.31■□□□□ 0.68
SCNN1A-212ENST00000538979 UBN2Q6ZU65 1347 aa19.3■□□□□ 0.68
SCNN1A-212ENST00000538979 OLFM4Q6UX06 510 aa19.3■□□□□ 0.68
SCNN1A-212ENST00000538979 NIM1KQ8IY84 436 aa19.3■□□□□ 0.68
SCNN1A-212ENST00000538979 ZNF34Q8IZ26 560 aa19.3■□□□□ 0.68
SCNN1A-212ENST00000538979 SUPT20HQ8NEM7 779 aa19.3■□□□□ 0.68
SCNN1A-212ENST00000538979 GJA3Q9Y6H8 435 aa19.3■□□□□ 0.68
SCNN1A-212ENST00000538979 SNED1Q8TER0 1413 aa19.29■□□□□ 0.68
SCNN1A-212ENST00000538979 CAPN15O75808 1086 aa19.29■□□□□ 0.68
SCNN1A-212ENST00000538979 SUSD4Q5VX71 490 aa19.29■□□□□ 0.68
SCNN1A-212ENST00000538979 UTP14AQ9BVJ6 771 aaKnown RBP19.29■□□□□ 0.68
SCNN1A-212ENST00000538979 VPS33BQ9H267 617 aa19.29■□□□□ 0.68
SCNN1A-212ENST00000538979 NTSR2O95665 410 aa19.28■□□□□ 0.68
SCNN1A-212ENST00000538979 EIF2S2P20042 333 aaKnown RBP19.28■□□□□ 0.68
SCNN1A-212ENST00000538979 CNTROBQ8N137 903 aa19.27■□□□□ 0.68
SCNN1A-212ENST00000538979 PPIP5K2O43314 1243 aa19.26■□□□□ 0.67
SCNN1A-212ENST00000538979 ITGBL1O95965 494 aaPredicted RBP19.26■□□□□ 0.67
SCNN1A-212ENST00000538979 ABT1Q9ULW3 272 aaKnown RBP19.26■□□□□ 0.67
SCNN1A-212ENST00000538979 USP50Q70EL3 339 aaPredicted RBP19.25■□□□□ 0.67
SCNN1A-212ENST00000538979 TCERG1O14776 1098 aaKnown RBP19.24■□□□□ 0.67
SCNN1A-212ENST00000538979 CTCFP49711 727 aaPredicted RBP19.24■□□□□ 0.67
SCNN1A-212ENST00000538979 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
SCNN1A-212ENST00000538979 DEFB115Q30KQ5 88 aa19.24■□□□□ 0.67
SCNN1A-212ENST00000538979 MAP1SQ66K74 1059 aaPredicted RBP19.24■□□□□ 0.67
SCNN1A-212ENST00000538979 ATP6V0A2Q9Y487 856 aa19.24■□□□□ 0.67
SCNN1A-212ENST00000538979 DDX60Q8IY21 1712 aaKnown RBP19.23■□□□□ 0.67
SCNN1A-212ENST00000538979 BBOX1O75936 387 aa19.23■□□□□ 0.67
SCNN1A-212ENST00000538979 TMPOP42166 694 aaKnown RBP19.23■□□□□ 0.67
SCNN1A-212ENST00000538979 SLC10A5Q5PT55 438 aa19.23■□□□□ 0.67
SCNN1A-212ENST00000538979 DDX46Q7L014 1031 aaKnown RBP19.23■□□□□ 0.67
SCNN1A-212ENST00000538979 TMC4Q7Z404 712 aa19.23■□□□□ 0.67
SCNN1A-212ENST00000538979 PRDM10Q9NQV6 1147 aa19.23■□□□□ 0.67
SCNN1A-212ENST00000538979 MYBBP1AQ9BQG0 1328 aaKnown RBP19.23■□□□□ 0.67
SCNN1A-212ENST00000538979 CDHR2Q9BYE9 1310 aa19.23■□□□□ 0.67
SCNN1A-212ENST00000538979 LTBP1Q14766 1721 aa19.22■□□□□ 0.67
SCNN1A-212ENST00000538979 RASSF10A6NK89 507 aa19.22■□□□□ 0.67
SCNN1A-212ENST00000538979 ECE1P42892 770 aa19.22■□□□□ 0.67
SCNN1A-212ENST00000538979 MAP2K1Q02750 393 aaPredicted RBP19.22■□□□□ 0.67
SCNN1A-212ENST00000538979 DPP8Q6V1X1 898 aaPredicted RBP19.22■□□□□ 0.67
SCNN1A-212ENST00000538979 BEGAINQ9BUH8 593 aa19.22■□□□□ 0.67
SCNN1A-212ENST00000538979 ABCC4O15439 1325 aa19.22■□□□□ 0.67
SCNN1A-212ENST00000538979 SH3TC1Q8TE82 1336 aa19.22■□□□□ 0.67
SCNN1A-212ENST00000538979 COL4A5P29400 1685 aa19.21■□□□□ 0.67
SCNN1A-212ENST00000538979 LRRC37AA6NMS7 1700 aa19.21■□□□□ 0.67
SCNN1A-212ENST00000538979 VEGFBP49765 207 aa19.21■□□□□ 0.67
SCNN1A-212ENST00000538979 AIMP1Q12904 312 aaKnown RBP19.21■□□□□ 0.67
SCNN1A-212ENST00000538979 DDX21Q9NR30 783 aaKnown RBP eCLIP19.21■□□□□ 0.67
SCNN1A-212ENST00000538979 TRMT112Q9UI30 125 aaKnown RBP19.21■□□□□ 0.67
SCNN1A-212ENST00000538979 HOXB7P09629 217 aa19.2■□□□□ 0.66
SCNN1A-212ENST00000538979 SCNN1DP51172 638 aa19.2■□□□□ 0.66
SCNN1A-212ENST00000538979 AOC3Q16853 763 aa19.2■□□□□ 0.66
SCNN1A-212ENST00000538979 PAXIP1Q6ZW49 1069 aaPredicted RBP19.2■□□□□ 0.66
SCNN1A-212ENST00000538979 COPS6Q7L5N1 327 aa19.2■□□□□ 0.66
SCNN1A-212ENST00000538979 ADARB2Q9NS39 739 aaKnown RBP19.2■□□□□ 0.66
SCNN1A-212ENST00000538979 ZNRF3Q9ULT6 936 aa19.2■□□□□ 0.66
SCNN1A-212ENST00000538979 THSD7BQ9C0I4 1608 aa19.2■□□□□ 0.66
SCNN1A-212ENST00000538979 FOXN1O15353 648 aa19.19■□□□□ 0.66
SCNN1A-212ENST00000538979 TNIP1Q15025 636 aa19.19■□□□□ 0.66
SCNN1A-212ENST00000538979 PDIA6Q15084 440 aa19.19■□□□□ 0.66
SCNN1A-212ENST00000538979 NEUROD2Q15784 382 aa19.19■□□□□ 0.66
SCNN1A-212ENST00000538979 SP8Q8IXZ3 490 aa19.19■□□□□ 0.66
SCNN1A-212ENST00000538979 MPNDQ8N594 471 aa19.19■□□□□ 0.66
SCNN1A-212ENST00000538979 XAGE3Q8WTP9 111 aa19.19■□□□□ 0.66
SCNN1A-212ENST00000538979 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
SCNN1A-212ENST00000538979 TCIRG1Q13488 830 aa19.18■□□□□ 0.66
SCNN1A-212ENST00000538979 LRP10Q7Z4F1 713 aa19.18■□□□□ 0.66
SCNN1A-212ENST00000538979 NLRP10Q86W26 655 aa19.18■□□□□ 0.66
SCNN1A-212ENST00000538979 NECTIN2Q92692 538 aa19.18■□□□□ 0.66
SCNN1A-212ENST00000538979 RUNDC1Q96C34 613 aa19.18■□□□□ 0.66
SCNN1A-212ENST00000538979 RTFDC1Q9BY42 306 aaPredicted RBP19.18■□□□□ 0.66
SCNN1A-212ENST00000538979 WDR33Q9C0J8 1336 aaKnown RBP19.18■□□□□ 0.66
SCNN1A-212ENST00000538979 ANXA1P04083 346 aa19.17■□□□□ 0.66
SCNN1A-212ENST00000538979 HSP90B1P14625 803 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms