RNA–Protein interactions for RNA: ENST00000537022.5

COPS7A-206, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 4

Gene COPS7A, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-206ENST00000537022 GPC2Q8N158 579 aa18.07■□□□□ 0.48
COPS7A-206ENST00000537022 RPGRQ92834 1020 aaKnown RBP18.07■□□□□ 0.48
COPS7A-206ENST00000537022 THUMPD2Q9BTF0 503 aaKnown RBP18.07■□□□□ 0.48
COPS7A-206ENST00000537022 COL4A5P29400 1685 aa18.06■□□□□ 0.48
COPS7A-206ENST00000537022 ITGBL1O95965 494 aaPredicted RBP18.06■□□□□ 0.48
COPS7A-206ENST00000537022 EPHX2P34913 555 aa18.06■□□□□ 0.48
COPS7A-206ENST00000537022 GIGYF2Q6Y7W6 1299 aaKnown RBP18.06■□□□□ 0.48
COPS7A-206ENST00000537022 PNMA8AQ86V59 439 aaPredicted RBP18.06■□□□□ 0.48
COPS7A-206ENST00000537022 JDP2Q8WYK2 163 aa18.06■□□□□ 0.48
COPS7A-206ENST00000537022 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
COPS7A-206ENST00000537022 MKRN1Q9UHC7 482 aaKnown RBP18.06■□□□□ 0.48
COPS7A-206ENST00000537022 NTSR2O95665 410 aa18.05■□□□□ 0.48
COPS7A-206ENST00000537022 GPTP24298 496 aa18.05■□□□□ 0.48
COPS7A-206ENST00000537022 SUSD4Q5VX71 490 aa18.05■□□□□ 0.48
COPS7A-206ENST00000537022 CRAMP1Q96RY5 1269 aa18.05■□□□□ 0.48
COPS7A-206ENST00000537022 BABAM1Q9NWV8 329 aa18.05■□□□□ 0.48
COPS7A-206ENST00000537022 LTBP1Q14766 1721 aa18.05■□□□□ 0.48
COPS7A-206ENST00000537022 RNF123Q5XPI4 1314 aa18.04■□□□□ 0.48
COPS7A-206ENST00000537022 PARP10Q53GL7 1025 aa18.04■□□□□ 0.48
COPS7A-206ENST00000537022 EAPPQ56P03 285 aaPredicted RBP18.04■□□□□ 0.48
COPS7A-206ENST00000537022 PPP1R42Q7Z4L9 355 aa18.04■□□□□ 0.48
COPS7A-206ENST00000537022 RBM17Q96I25 401 aaKnown RBP18.04■□□□□ 0.48
COPS7A-206ENST00000537022 TSPYL4Q9UJ04 414 aa18.04■□□□□ 0.48
COPS7A-206ENST00000537022 TRPM7Q96QT4 1865 aa18.03■□□□□ 0.48
COPS7A-206ENST00000537022 TMEM88BA6NKF7 163 aa18.03■□□□□ 0.48
COPS7A-206ENST00000537022 LRP10Q7Z4F1 713 aa18.03■□□□□ 0.48
COPS7A-206ENST00000537022 EIF6P56537 245 aaKnown RBP18.02■□□□□ 0.48
COPS7A-206ENST00000537022 CLEC11AQ9Y240 323 aa18.02■□□□□ 0.48
COPS7A-206ENST00000537022 PPEF1O14829 653 aaPredicted RBP18.01■□□□□ 0.47
COPS7A-206ENST00000537022 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
COPS7A-206ENST00000537022 PDIA6Q15084 440 aa18.01■□□□□ 0.47
COPS7A-206ENST00000537022 RALBP1Q15311 655 aa18.01■□□□□ 0.47
COPS7A-206ENST00000537022 RIPK4P57078 832 aa18■□□□□ 0.47
COPS7A-206ENST00000537022 SLC10A5Q5PT55 438 aa18■□□□□ 0.47
COPS7A-206ENST00000537022 NLRP3Q96P20 1036 aa18■□□□□ 0.47
COPS7A-206ENST00000537022 LMOD1P29536 600 aaPredicted RBP17.99■□□□□ 0.47
COPS7A-206ENST00000537022 CNTROBQ8N137 903 aa17.99■□□□□ 0.47
COPS7A-206ENST00000537022 LARGE2Q8N3Y3 721 aa17.99■□□□□ 0.47
COPS7A-206ENST00000537022 UTP14AQ9BVJ6 771 aaKnown RBP17.99■□□□□ 0.47
COPS7A-206ENST00000537022 VPS33BQ9H267 617 aa17.99■□□□□ 0.47
COPS7A-206ENST00000537022 THSD7BQ9C0I4 1608 aa17.98■□□□□ 0.47
COPS7A-206ENST00000537022 RASSF10A6NK89 507 aa17.98■□□□□ 0.47
COPS7A-206ENST00000537022 TMPOP42166 694 aaKnown RBP17.98■□□□□ 0.47
COPS7A-206ENST00000537022 HSP90AB3PQ58FF7 597 aa17.98■□□□□ 0.47
COPS7A-206ENST00000537022 MAP1SQ66K74 1059 aaPredicted RBP17.98■□□□□ 0.47
COPS7A-206ENST00000537022 C3orf67Q6ZVT6 689 aa17.98■□□□□ 0.47
COPS7A-206ENST00000537022 GJA3Q9Y6H8 435 aa17.98■□□□□ 0.47
COPS7A-206ENST00000537022 LRRC37AA6NMS7 1700 aa17.98■□□□□ 0.47
COPS7A-206ENST00000537022 CAPN15O75808 1086 aa17.97■□□□□ 0.47
COPS7A-206ENST00000537022 EIF2S2P20042 333 aaKnown RBP17.97■□□□□ 0.47
COPS7A-206ENST00000537022 VEGFBP49765 207 aa17.97■□□□□ 0.47
COPS7A-206ENST00000537022 SCNN1DP51172 638 aa17.97■□□□□ 0.47
COPS7A-206ENST00000537022 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
COPS7A-206ENST00000537022 TMX4Q9H1E5 349 aaPredicted RBP17.97■□□□□ 0.47
COPS7A-206ENST00000537022 ATP6V0A2Q9Y487 856 aa17.97■□□□□ 0.47
COPS7A-206ENST00000537022 DDX60Q8IY21 1712 aaKnown RBP17.97■□□□□ 0.47
COPS7A-206ENST00000537022 TAF1P21675 1872 aa17.97■□□□□ 0.47
COPS7A-206ENST00000537022 FOXN1O15353 648 aa17.96■□□□□ 0.47
COPS7A-206ENST00000537022 NIM1KQ8IY84 436 aa17.96■□□□□ 0.47
COPS7A-206ENST00000537022 PRDM10Q9NQV6 1147 aa17.96■□□□□ 0.47
COPS7A-206ENST00000537022 ABCC4O15439 1325 aa17.96■□□□□ 0.46
COPS7A-206ENST00000537022 PPIP5K2O43314 1243 aa17.95■□□□□ 0.46
COPS7A-206ENST00000537022 USP50Q70EL3 339 aaPredicted RBP17.95■□□□□ 0.46
COPS7A-206ENST00000537022 SUPT20HQ8NEM7 779 aa17.95■□□□□ 0.46
COPS7A-206ENST00000537022 AIDAQ96BJ3 306 aa17.95■□□□□ 0.46
COPS7A-206ENST00000537022 RTFDC1Q9BY42 306 aaPredicted RBP17.95■□□□□ 0.46
COPS7A-206ENST00000537022 TCERG1O14776 1098 aaKnown RBP17.94■□□□□ 0.46
COPS7A-206ENST00000537022 ANXA1P04083 346 aa17.94■□□□□ 0.46
COPS7A-206ENST00000537022 CTCFP49711 727 aaPredicted RBP17.94■□□□□ 0.46
COPS7A-206ENST00000537022 DEFB115Q30KQ5 88 aa17.94■□□□□ 0.46
COPS7A-206ENST00000537022 COPS6Q7L5N1 327 aa17.94■□□□□ 0.46
COPS7A-206ENST00000537022 SLC51AQ86UW1 340 aa17.94■□□□□ 0.46
COPS7A-206ENST00000537022 NLRP10Q86W26 655 aa17.94■□□□□ 0.46
COPS7A-206ENST00000537022 DDX21Q9NR30 783 aaKnown RBP eCLIP17.94■□□□□ 0.46
COPS7A-206ENST00000537022 BBOX1O75936 387 aa17.93■□□□□ 0.46
COPS7A-206ENST00000537022 EPS15P42566 896 aa17.93■□□□□ 0.46
COPS7A-206ENST00000537022 SP8Q8IXZ3 490 aa17.93■□□□□ 0.46
COPS7A-206ENST00000537022 XAGE3Q8WTP9 111 aa17.93■□□□□ 0.46
COPS7A-206ENST00000537022 WBP1LQ9NX94 342 aa17.93■□□□□ 0.46
COPS7A-206ENST00000537022 MYBBP1AQ9BQG0 1328 aaKnown RBP17.93■□□□□ 0.46
COPS7A-206ENST00000537022 CHL1O00533 1208 aa17.92■□□□□ 0.46
COPS7A-206ENST00000537022 TCIRG1Q13488 830 aa17.92■□□□□ 0.46
COPS7A-206ENST00000537022 AOC3Q16853 763 aa17.92■□□□□ 0.46
COPS7A-206ENST00000537022 ZNRF3Q9ULT6 936 aa17.92■□□□□ 0.46
COPS7A-206ENST00000537022 CDHR2Q9BYE9 1310 aa17.92■□□□□ 0.46
COPS7A-206ENST00000537022 HOXB7P09629 217 aa17.91■□□□□ 0.46
COPS7A-206ENST00000537022 ADARB2Q9NS39 739 aaKnown RBP17.91■□□□□ 0.46
COPS7A-206ENST00000537022 GPRC5DQ9NZD1 345 aa17.91■□□□□ 0.46
COPS7A-206ENST00000537022 ABT1Q9ULW3 272 aaKnown RBP17.91■□□□□ 0.46
COPS7A-206ENST00000537022 SH3TC1Q8TE82 1336 aa17.91■□□□□ 0.46
COPS7A-206ENST00000537022 WDR33Q9C0J8 1336 aaKnown RBP17.91■□□□□ 0.46
COPS7A-206ENST00000537022 DUOX1Q9NRD9 1551 aa17.91■□□□□ 0.46
COPS7A-206ENST00000537022 AIMP1Q12904 312 aaKnown RBP17.9■□□□□ 0.46
COPS7A-206ENST00000537022 DPP8Q6V1X1 898 aaPredicted RBP17.9■□□□□ 0.46
COPS7A-206ENST00000537022 DDX46Q7L014 1031 aaKnown RBP17.9■□□□□ 0.46
COPS7A-206ENST00000537022 TMC4Q7Z404 712 aa17.9■□□□□ 0.46
COPS7A-206ENST00000537022 TRMT112Q9UI30 125 aaKnown RBP17.9■□□□□ 0.46
COPS7A-206ENST00000537022 HCLS1P14317 486 aaPredicted RBP17.89■□□□□ 0.45
COPS7A-206ENST00000537022 MAP2K1Q02750 393 aaPredicted RBP17.89■□□□□ 0.45
COPS7A-206ENST00000537022 CXCL9Q07325 125 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms