RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 LRP10Q7Z4F1 713 aa25.8■■□□□ 1.72
TNFRSF1B-204ENST00000536782 PPP1R42Q7Z4L9 355 aa25.8■■□□□ 1.72
TNFRSF1B-204ENST00000536782 NTSR2O95665 410 aa25.79■■□□□ 1.72
TNFRSF1B-204ENST00000536782 PARP10Q53GL7 1025 aa25.79■■□□□ 1.72
TNFRSF1B-204ENST00000536782 PSMD1Q99460 953 aa25.79■■□□□ 1.72
TNFRSF1B-204ENST00000536782 ZNF541Q9H0D2 1346 aa25.79■■□□□ 1.72
TNFRSF1B-204ENST00000536782 NEUROD2Q15784 382 aa25.78■■□□□ 1.72
TNFRSF1B-204ENST00000536782 CCDC146Q8IYE0 955 aa25.78■■□□□ 1.72
TNFRSF1B-204ENST00000536782 RBM17Q96I25 401 aaKnown RBP25.78■■□□□ 1.72
TNFRSF1B-204ENST00000536782 TAF1DQ9H5J8 278 aaPredicted RBP25.78■■□□□ 1.72
TNFRSF1B-204ENST00000536782 ADAMTSL1Q8N6G6 1762 aa25.77■■□□□ 1.72
TNFRSF1B-204ENST00000536782 PROSER3Q2NL68 480 aa25.77■■□□□ 1.72
TNFRSF1B-204ENST00000536782 CRAMP1Q96RY5 1269 aa25.77■■□□□ 1.72
TNFRSF1B-204ENST00000536782 FZD9O00144 591 aa25.76■■□□□ 1.71
TNFRSF1B-204ENST00000536782 ANXA1P04083 346 aa25.76■■□□□ 1.71
TNFRSF1B-204ENST00000536782 GRIPAP1Q4V328 841 aa25.76■■□□□ 1.71
TNFRSF1B-204ENST00000536782 LDHDQ86WU2 507 aa25.76■■□□□ 1.71
TNFRSF1B-204ENST00000536782 JDP2Q8WYK2 163 aa25.76■■□□□ 1.71
TNFRSF1B-204ENST00000536782 WDR43Q15061 677 aaKnown RBP eCLIP25.75■■□□□ 1.71
TNFRSF1B-204ENST00000536782 RUNDC1Q96C34 613 aa25.75■■□□□ 1.71
TNFRSF1B-204ENST00000536782 NLRP3Q96P20 1036 aa25.75■■□□□ 1.71
TNFRSF1B-204ENST00000536782 UTP14AQ9BVJ6 771 aaKnown RBP25.75■■□□□ 1.71
TNFRSF1B-204ENST00000536782 HACL1Q9UJ83 578 aa25.75■■□□□ 1.71
TNFRSF1B-204ENST00000536782 COL4A5P29400 1685 aa25.74■■□□□ 1.71
TNFRSF1B-204ENST00000536782 NECTIN2Q92692 538 aa25.74■■□□□ 1.71
TNFRSF1B-204ENST00000536782 CHL1O00533 1208 aa25.73■■□□□ 1.71
TNFRSF1B-204ENST00000536782 PPEF1O14829 653 aaPredicted RBP25.73■■□□□ 1.71
TNFRSF1B-204ENST00000536782 C3orf67Q6ZVT6 689 aa25.73■■□□□ 1.71
TNFRSF1B-204ENST00000536782 COPS6Q7L5N1 327 aa25.73■■□□□ 1.71
TNFRSF1B-204ENST00000536782 CREBZFQ9NS37 354 aa25.73■■□□□ 1.71
TNFRSF1B-204ENST00000536782 AIMP1Q12904 312 aaKnown RBP25.72■■□□□ 1.71
TNFRSF1B-204ENST00000536782 EAPPQ56P03 285 aaPredicted RBP25.72■■□□□ 1.71
TNFRSF1B-204ENST00000536782 HSP90AB3PQ58FF7 597 aa25.72■■□□□ 1.71
TNFRSF1B-204ENST00000536782 SLC10A5Q5PT55 438 aa25.72■■□□□ 1.71
TNFRSF1B-204ENST00000536782 GPC2Q8N158 579 aa25.72■■□□□ 1.71
TNFRSF1B-204ENST00000536782 LAS1LQ9Y4W2 734 aaKnown RBP25.72■■□□□ 1.71
TNFRSF1B-204ENST00000536782 RNF123Q5XPI4 1314 aa25.71■■□□□ 1.71
TNFRSF1B-204ENST00000536782 PASKQ96RG2 1323 aa25.71■■□□□ 1.71
TNFRSF1B-204ENST00000536782 TCERG1O14776 1098 aaKnown RBP25.71■■□□□ 1.71
TNFRSF1B-204ENST00000536782 HSPA1AP0DMV8 641 aaKnown RBP25.71■■□□□ 1.71
TNFRSF1B-204ENST00000536782 HSPA1BP0DMV9 641 aaKnown RBP25.71■■□□□ 1.71
TNFRSF1B-204ENST00000536782 EPHX2P34913 555 aa25.71■■□□□ 1.71
TNFRSF1B-204ENST00000536782 SLC51AQ86UW1 340 aa25.71■■□□□ 1.71
TNFRSF1B-204ENST00000536782 XAGE3Q8WTP9 111 aa25.71■■□□□ 1.71
TNFRSF1B-204ENST00000536782 TRIM35Q9UPQ4 493 aa25.71■■□□□ 1.71
TNFRSF1B-204ENST00000536782 EIF6P56537 245 aaKnown RBP25.7■■□□□ 1.7
TNFRSF1B-204ENST00000536782 PNMA8AQ86V59 439 aaPredicted RBP25.7■■□□□ 1.7
TNFRSF1B-204ENST00000536782 TMX4Q9H1E5 349 aaPredicted RBP25.7■■□□□ 1.7
TNFRSF1B-204ENST00000536782 DDX21Q9NR30 783 aaKnown RBP eCLIP25.7■■□□□ 1.7
TNFRSF1B-204ENST00000536782 KRT24Q2M2I5 525 aa25.69■■□□□ 1.7
TNFRSF1B-204ENST00000536782 ADAMTS8Q9UP79 889 aa25.69■■□□□ 1.7
TNFRSF1B-204ENST00000536782 CLEC11AQ9Y240 323 aa25.69■■□□□ 1.7
TNFRSF1B-204ENST00000536782 LTBP1Q14766 1721 aa25.68■■□□□ 1.7
TNFRSF1B-204ENST00000536782 NLRP10Q86W26 655 aa25.68■■□□□ 1.7
TNFRSF1B-204ENST00000536782 LARGE2Q8N3Y3 721 aa25.68■■□□□ 1.7
TNFRSF1B-204ENST00000536782 LAMB2P55268 1798 aa25.68■■□□□ 1.7
TNFRSF1B-204ENST00000536782 ANKRD36CQ5JPF3 1778 aa25.67■■□□□ 1.7
TNFRSF1B-204ENST00000536782 ITGBL1O95965 494 aaPredicted RBP25.67■■□□□ 1.7
TNFRSF1B-204ENST00000536782 TCIRG1Q13488 830 aa25.67■■□□□ 1.7
TNFRSF1B-204ENST00000536782 MKRN1Q9UHC7 482 aaKnown RBP25.66■■□□□ 1.7
TNFRSF1B-204ENST00000536782 ATP6V0A2Q9Y487 856 aa25.66■■□□□ 1.7
TNFRSF1B-204ENST00000536782 GJA3Q9Y6H8 435 aa25.66■■□□□ 1.7
TNFRSF1B-204ENST00000536782 ABCC4O15439 1325 aa25.65■■□□□ 1.7
TNFRSF1B-204ENST00000536782 CHPF2Q9P2E5 772 aa25.65■■□□□ 1.7
TNFRSF1B-204ENST00000536782 TRMT112Q9UI30 125 aaKnown RBP25.65■■□□□ 1.7
TNFRSF1B-204ENST00000536782 HOXB7P09629 217 aa25.64■■□□□ 1.7
TNFRSF1B-204ENST00000536782 HDGFL1Q5TGJ6 251 aa25.64■■□□□ 1.7
TNFRSF1B-204ENST00000536782 NIM1KQ8IY84 436 aa25.64■■□□□ 1.7
TNFRSF1B-204ENST00000536782 BBOX1O75936 387 aa25.63■■□□□ 1.69
TNFRSF1B-204ENST00000536782 HCLS1P14317 486 aaPredicted RBP25.63■■□□□ 1.69
TNFRSF1B-204ENST00000536782 LMOD1P29536 600 aaPredicted RBP25.63■■□□□ 1.69
TNFRSF1B-204ENST00000536782 CFAP44Q96MT7 982 aa25.63■■□□□ 1.69
TNFRSF1B-204ENST00000536782 VPS33BQ9H267 617 aa25.63■■□□□ 1.69
TNFRSF1B-204ENST00000536782 PRKRIP1Q9H875 184 aaPredicted RBP25.63■■□□□ 1.69
TNFRSF1B-204ENST00000536782 SH3TC1Q8TE82 1336 aa25.63■■□□□ 1.69
TNFRSF1B-204ENST00000536782 TAF1P21675 1872 aa25.62■■□□□ 1.69
TNFRSF1B-204ENST00000536782 CNTNAP1P78357 1384 aa25.62■■□□□ 1.69
TNFRSF1B-204ENST00000536782 TMEM88BA6NKF7 163 aa25.62■■□□□ 1.69
TNFRSF1B-204ENST00000536782 PPIP5K2O43314 1243 aa25.62■■□□□ 1.69
TNFRSF1B-204ENST00000536782 DBF4Q9UBU7 674 aaPredicted RBP25.62■■□□□ 1.69
TNFRSF1B-204ENST00000536782 MAP1SQ66K74 1059 aaPredicted RBP25.61■■□□□ 1.69
TNFRSF1B-204ENST00000536782 TNS4Q8IZW8 715 aa25.61■■□□□ 1.69
TNFRSF1B-204ENST00000536782 CNTROBQ8N137 903 aa25.61■■□□□ 1.69
TNFRSF1B-204ENST00000536782 SUPT20HQ8NEM7 779 aa25.61■■□□□ 1.69
TNFRSF1B-204ENST00000536782 PLBD2Q8NHP8 589 aa25.61■■□□□ 1.69
TNFRSF1B-204ENST00000536782 AOC3Q16853 763 aa25.6■■□□□ 1.69
TNFRSF1B-204ENST00000536782 ANKRD13DQ6ZTN6 518 aa25.6■■□□□ 1.69
TNFRSF1B-204ENST00000536782 DDX46Q7L014 1031 aaKnown RBP25.6■■□□□ 1.69
TNFRSF1B-204ENST00000536782 SP8Q8IXZ3 490 aa25.6■■□□□ 1.69
TNFRSF1B-204ENST00000536782 SCNN1DP51172 638 aa25.59■■□□□ 1.69
TNFRSF1B-204ENST00000536782 RTFDC1Q9BY42 306 aaPredicted RBP25.59■■□□□ 1.69
TNFRSF1B-204ENST00000536782 DUSP27Q5VZP5 1158 aa25.58■■□□□ 1.69
TNFRSF1B-204ENST00000536782 DPP8Q6V1X1 898 aaPredicted RBP25.58■■□□□ 1.69
TNFRSF1B-204ENST00000536782 MBIPQ9NS73 344 aa25.58■■□□□ 1.69
TNFRSF1B-204ENST00000536782 HYPKQ9NX55 129 aa25.58■■□□□ 1.69
TNFRSF1B-204ENST00000536782 EPS15P42566 896 aa25.57■■□□□ 1.68
TNFRSF1B-204ENST00000536782 GRAPQ13588 217 aa25.57■■□□□ 1.68
TNFRSF1B-204ENST00000536782 MPNDQ8N594 471 aa25.57■■□□□ 1.68
TNFRSF1B-204ENST00000536782 GRAPLQ8TC17 118 aaPredicted RBP25.57■■□□□ 1.68
TNFRSF1B-204ENST00000536782 ZNF428Q96B54 188 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms