RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 GPTP24298 496 aa16.29■□□□□ 0.2
PRKDC-207ENST00000536483 CRY2Q49AN0 593 aa16.29■□□□□ 0.2
PRKDC-207ENST00000536483 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
PRKDC-207ENST00000536483 KIF6Q6ZMV9 814 aa16.29■□□□□ 0.2
PRKDC-207ENST00000536483 HACL1Q9UJ83 578 aa16.29■□□□□ 0.2
PRKDC-207ENST00000536483 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
PRKDC-207ENST00000536483 FZD9O00144 591 aa16.28■□□□□ 0.2
PRKDC-207ENST00000536483 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
PRKDC-207ENST00000536483 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
PRKDC-207ENST00000536483 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
PRKDC-207ENST00000536483 SCN4AP35499 1836 aa16.28■□□□□ 0.2
PRKDC-207ENST00000536483 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
PRKDC-207ENST00000536483 UBN2Q6ZU65 1347 aa16.27■□□□□ 0.2
PRKDC-207ENST00000536483 ITGBL1O95965 494 aaPredicted RBP16.27■□□□□ 0.2
PRKDC-207ENST00000536483 EPHX2P34913 555 aa16.27■□□□□ 0.2
PRKDC-207ENST00000536483 SUSD4Q5VX71 490 aa16.27■□□□□ 0.2
PRKDC-207ENST00000536483 PSMD1Q99460 953 aa16.27■□□□□ 0.2
PRKDC-207ENST00000536483 CCDC184Q52MB2 194 aa16.26■□□□□ 0.19
PRKDC-207ENST00000536483 JDP2Q8WYK2 163 aa16.26■□□□□ 0.19
PRKDC-207ENST00000536483 RPGRQ92834 1020 aaKnown RBP16.26■□□□□ 0.19
PRKDC-207ENST00000536483 SNED1Q8TER0 1413 aa16.26■□□□□ 0.19
PRKDC-207ENST00000536483 CNTNAP1P78357 1384 aa16.26■□□□□ 0.19
PRKDC-207ENST00000536483 NUP98P52948 1817 aa16.25■□□□□ 0.19
PRKDC-207ENST00000536483 TMEM88BA6NKF7 163 aa16.25■□□□□ 0.19
PRKDC-207ENST00000536483 ZNF853P0CG23 659 aa16.25■□□□□ 0.19
PRKDC-207ENST00000536483 HOXA10P31260 410 aaPredicted RBP16.25■□□□□ 0.19
PRKDC-207ENST00000536483 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
PRKDC-207ENST00000536483 LRP10Q7Z4F1 713 aa16.25■□□□□ 0.19
PRKDC-207ENST00000536483 ZNF34Q8IZ26 560 aa16.25■□□□□ 0.19
PRKDC-207ENST00000536483 GPC2Q8N158 579 aa16.25■□□□□ 0.19
PRKDC-207ENST00000536483 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
PRKDC-207ENST00000536483 APAF1O14727 1248 aa16.24■□□□□ 0.19
PRKDC-207ENST00000536483 TCERG1O14776 1098 aaKnown RBP16.24■□□□□ 0.19
PRKDC-207ENST00000536483 ANP32CO43423 234 aa16.24■□□□□ 0.19
PRKDC-207ENST00000536483 NTSR2O95665 410 aa16.24■□□□□ 0.19
PRKDC-207ENST00000536483 NEUROD2Q15784 382 aa16.24■□□□□ 0.19
PRKDC-207ENST00000536483 GIGYF2Q6Y7W6 1299 aaKnown RBP16.24■□□□□ 0.19
PRKDC-207ENST00000536483 SLC51AQ86UW1 340 aa16.24■□□□□ 0.19
PRKDC-207ENST00000536483 PNMA8AQ86V59 439 aaPredicted RBP16.24■□□□□ 0.19
PRKDC-207ENST00000536483 GJA3Q9Y6H8 435 aa16.24■□□□□ 0.19
PRKDC-207ENST00000536483 HOXB7P09629 217 aa16.23■□□□□ 0.19
PRKDC-207ENST00000536483 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
PRKDC-207ENST00000536483 EIF6P56537 245 aaKnown RBP16.23■□□□□ 0.19
PRKDC-207ENST00000536483 PDIA6Q15084 440 aa16.23■□□□□ 0.19
PRKDC-207ENST00000536483 CCDC27Q2M243 656 aa16.23■□□□□ 0.19
PRKDC-207ENST00000536483 MAP1SQ66K74 1059 aaPredicted RBP16.23■□□□□ 0.19
PRKDC-207ENST00000536483 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
PRKDC-207ENST00000536483 CNTROBQ8N137 903 aa16.23■□□□□ 0.19
PRKDC-207ENST00000536483 RBM17Q96I25 401 aaKnown RBP16.23■□□□□ 0.19
PRKDC-207ENST00000536483 IBTKQ9P2D0 1353 aaPredicted RBP16.23■□□□□ 0.19
PRKDC-207ENST00000536483 RIC1Q4ADV7 1423 aa16.22■□□□□ 0.19
PRKDC-207ENST00000536483 COL4A5P29400 1685 aa16.22■□□□□ 0.19
PRKDC-207ENST00000536483 PPEF1O14829 653 aaPredicted RBP16.22■□□□□ 0.19
PRKDC-207ENST00000536483 VEGFBP49765 207 aa16.22■□□□□ 0.19
PRKDC-207ENST00000536483 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
PRKDC-207ENST00000536483 FOXN1O15353 648 aa16.21■□□□□ 0.19
PRKDC-207ENST00000536483 CALD1Q05682 793 aaKnown RBP16.21■□□□□ 0.19
PRKDC-207ENST00000536483 PPP1R42Q7Z4L9 355 aa16.21■□□□□ 0.19
PRKDC-207ENST00000536483 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
PRKDC-207ENST00000536483 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
PRKDC-207ENST00000536483 ADAMTSL1Q8N6G6 1762 aa16.21■□□□□ 0.18
PRKDC-207ENST00000536483 ANXA1P04083 346 aa16.2■□□□□ 0.18
PRKDC-207ENST00000536483 PROSER3Q2NL68 480 aa16.2■□□□□ 0.18
PRKDC-207ENST00000536483 GRIPAP1Q4V328 841 aa16.2■□□□□ 0.18
PRKDC-207ENST00000536483 PARP10Q53GL7 1025 aa16.2■□□□□ 0.18
PRKDC-207ENST00000536483 NLRP3Q96P20 1036 aa16.2■□□□□ 0.18
PRKDC-207ENST00000536483 LMOD1P29536 600 aaPredicted RBP16.19■□□□□ 0.18
PRKDC-207ENST00000536483 SCNN1DP51172 638 aa16.19■□□□□ 0.18
PRKDC-207ENST00000536483 UTP14AQ9BVJ6 771 aaKnown RBP16.19■□□□□ 0.18
PRKDC-207ENST00000536483 EPS15P42566 896 aa16.18■□□□□ 0.18
PRKDC-207ENST00000536483 GNAI1P63096 354 aa16.18■□□□□ 0.18
PRKDC-207ENST00000536483 DEFB115Q30KQ5 88 aa16.18■□□□□ 0.18
PRKDC-207ENST00000536483 SLC10A5Q5PT55 438 aa16.18■□□□□ 0.18
PRKDC-207ENST00000536483 NECTIN2Q92692 538 aa16.18■□□□□ 0.18
PRKDC-207ENST00000536483 AIDAQ96BJ3 306 aa16.18■□□□□ 0.18
PRKDC-207ENST00000536483 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
PRKDC-207ENST00000536483 RASSF10A6NK89 507 aa16.17■□□□□ 0.18
PRKDC-207ENST00000536483 PPIP5K2O43314 1243 aa16.17■□□□□ 0.18
PRKDC-207ENST00000536483 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
PRKDC-207ENST00000536483 AOC3Q16853 763 aa16.17■□□□□ 0.18
PRKDC-207ENST00000536483 NIM1KQ8IY84 436 aa16.17■□□□□ 0.18
PRKDC-207ENST00000536483 TMX4Q9H1E5 349 aaPredicted RBP16.17■□□□□ 0.18
PRKDC-207ENST00000536483 DDX21Q9NR30 783 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRKDC-207ENST00000536483 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
PRKDC-207ENST00000536483 ATP6V0A2Q9Y487 856 aa16.17■□□□□ 0.18
PRKDC-207ENST00000536483 LTBP1Q14766 1721 aa16.16■□□□□ 0.18
PRKDC-207ENST00000536483 CTCFP49711 727 aaPredicted RBP16.16■□□□□ 0.18
PRKDC-207ENST00000536483 FMR1Q06787 632 aaKnown RBP eCLIP16.16■□□□□ 0.181e-9■■■■■ 38.5
PRKDC-207ENST00000536483 COPS6Q7L5N1 327 aa16.16■□□□□ 0.18
PRKDC-207ENST00000536483 PRDM10Q9NQV6 1147 aa16.16■□□□□ 0.18
PRKDC-207ENST00000536483 WBP1LQ9NX94 342 aa16.16■□□□□ 0.18
PRKDC-207ENST00000536483 ABT1Q9ULW3 272 aaKnown RBP16.16■□□□□ 0.18
PRKDC-207ENST00000536483 ABCC4O15439 1325 aa16.16■□□□□ 0.18
PRKDC-207ENST00000536483 KRT24Q2M2I5 525 aa16.15■□□□□ 0.18
PRKDC-207ENST00000536483 XAGE3Q8WTP9 111 aa16.15■□□□□ 0.18
PRKDC-207ENST00000536483 IL16Q14005 1332 aa16.15■□□□□ 0.18
PRKDC-207ENST00000536483 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
PRKDC-207ENST00000536483 HSP90AB3PQ58FF7 597 aa16.14■□□□□ 0.17
PRKDC-207ENST00000536483 USP50Q70EL3 339 aaPredicted RBP16.14■□□□□ 0.17
PRKDC-207ENST00000536483 NLRP10Q86W26 655 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms