RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 NUTM1Q86Y26 1132 aa24.09■■□□□ 1.45
PUF60-218ENST00000531995 C7orf43Q8WVR3 580 aa24.09■■□□□ 1.45
PUF60-218ENST00000531995 FANCIQ9NVI1 1328 aa24.09■■□□□ 1.45
PUF60-218ENST00000531995 POTEIP0CG38 1075 aa24.08■■□□□ 1.45
PUF60-218ENST00000531995 POTEJP0CG39 1038 aa24.08■■□□□ 1.45
PUF60-218ENST00000531995 GTF2E1P29083 439 aaPredicted RBP24.08■■□□□ 1.45
PUF60-218ENST00000531995 JMYQ8N9B5 988 aa24.08■■□□□ 1.45
PUF60-218ENST00000531995 ZBTB3Q9H5J0 574 aa24.08■■□□□ 1.45
PUF60-218ENST00000531995 ZNF277Q9NRM2 450 aaPredicted RBP24.08■■□□□ 1.45
PUF60-218ENST00000531995 ANKRD36CQ5JPF3 1778 aa24.08■■□□□ 1.44
PUF60-218ENST00000531995 MAP3K15Q6ZN16 1313 aa24.08■■□□□ 1.44
PUF60-218ENST00000531995 KLRG2A4D1S0 409 aaPredicted RBP24.07■■□□□ 1.44
PUF60-218ENST00000531995 GPTP24298 496 aa24.07■■□□□ 1.44
PUF60-218ENST00000531995 TSPYL6Q8N831 410 aa24.07■■□□□ 1.44
PUF60-218ENST00000531995 CDCA7LQ96GN5 454 aa24.07■■□□□ 1.44
PUF60-218ENST00000531995 UBN2Q6ZU65 1347 aa24.07■■□□□ 1.44
PUF60-218ENST00000531995 ZNF541Q9H0D2 1346 aa24.07■■□□□ 1.44
PUF60-218ENST00000531995 HNRNPUQ00839 825 aaKnown RBP eCLIP24.06■■□□□ 1.44
PUF60-218ENST00000531995 FKBP4Q02790 459 aaKnown RBP eCLIP24.06■■□□□ 1.44
PUF60-218ENST00000531995 GOLGA2Q08379 1002 aa24.06■■□□□ 1.44
PUF60-218ENST00000531995 SLFN5Q08AF3 891 aa24.06■■□□□ 1.44
PUF60-218ENST00000531995 DUSP27Q5VZP5 1158 aa24.06■■□□□ 1.44
PUF60-218ENST00000531995 TRMT2AQ8IZ69 625 aaKnown RBP24.05■■□□□ 1.44
PUF60-218ENST00000531995 ELL2O00472 640 aaPredicted RBP24.04■■□□□ 1.44
PUF60-218ENST00000531995 PDIA6Q15084 440 aa24.04■■□□□ 1.44
PUF60-218ENST00000531995 LAMB2P55268 1798 aa24.03■■□□□ 1.44
PUF60-218ENST00000531995 SNED1Q8TER0 1413 aa24.03■■□□□ 1.44
PUF60-218ENST00000531995 COL4A5P29400 1685 aa24.03■■□□□ 1.44
PUF60-218ENST00000531995 ERVV-1B6SEH8 477 aa24.03■■□□□ 1.44
PUF60-218ENST00000531995 HOXB7P09629 217 aa24.03■■□□□ 1.44
PUF60-218ENST00000531995 EIF2S2P20042 333 aaKnown RBP24.03■■□□□ 1.44
PUF60-218ENST00000531995 LRP10Q7Z4F1 713 aa24.03■■□□□ 1.44
PUF60-218ENST00000531995 SLC51AQ86UW1 340 aa24.03■■□□□ 1.44
PUF60-218ENST00000531995 NYXQ9GZU5 481 aa24.03■■□□□ 1.44
PUF60-218ENST00000531995 IBTKQ9P2D0 1353 aaPredicted RBP24.03■■□□□ 1.44
PUF60-218ENST00000531995 EXOSC9Q06265 439 aaKnown RBP24.02■■□□□ 1.44
PUF60-218ENST00000531995 CHADLQ6NUI6 762 aa24.02■■□□□ 1.44
PUF60-218ENST00000531995 RIC1Q4ADV7 1423 aa24.01■■□□□ 1.43
PUF60-218ENST00000531995 ADAMTSL1Q8N6G6 1762 aa24.01■■□□□ 1.43
PUF60-218ENST00000531995 E9PSI1 815 aa24.01■■□□□ 1.43
PUF60-218ENST00000531995 CRY2Q49AN0 593 aa24.01■■□□□ 1.43
PUF60-218ENST00000531995 NECTIN2Q92692 538 aa24.01■■□□□ 1.43
PUF60-218ENST00000531995 MYH16Q9H6N6 1097 aa24.01■■□□□ 1.43
PUF60-218ENST00000531995 PROSER3Q2NL68 480 aa24■■□□□ 1.43
PUF60-218ENST00000531995 RTKN2Q8IZC4 609 aa24■■□□□ 1.43
PUF60-218ENST00000531995 RPGRQ92834 1020 aaKnown RBP24■■□□□ 1.43
PUF60-218ENST00000531995 IQCA1LA6NCM1 817 aa23.99■■□□□ 1.43
PUF60-218ENST00000531995 ANXA1P04083 346 aa23.99■■□□□ 1.43
PUF60-218ENST00000531995 ALDH1B1P30837 517 aa23.99■■□□□ 1.43
PUF60-218ENST00000531995 IARSP41252 1262 aaKnown RBP23.99■■□□□ 1.43
PUF60-218ENST00000531995 SUSD4Q5VX71 490 aa23.99■■□□□ 1.43
PUF60-218ENST00000531995 L3MBTL3Q96JM7 780 aaPredicted RBP23.99■■□□□ 1.43
PUF60-218ENST00000531995 VAMP4O75379 141 aa23.98■■□□□ 1.43
PUF60-218ENST00000531995 NTSR2O95665 410 aa23.98■■□□□ 1.43
PUF60-218ENST00000531995 TWISTNBQ3B726 338 aaPredicted RBP23.98■■□□□ 1.43
PUF60-218ENST00000531995 HDGFL1Q5TGJ6 251 aa23.98■■□□□ 1.43
PUF60-218ENST00000531995 TAF1DQ9H5J8 278 aaPredicted RBP23.98■■□□□ 1.43
PUF60-218ENST00000531995 ERBB4Q15303 1308 aa23.98■■□□□ 1.43
PUF60-218ENST00000531995 LTBP1Q14766 1721 aa23.97■■□□□ 1.43
PUF60-218ENST00000531995 EAPPQ56P03 285 aaPredicted RBP23.97■■□□□ 1.43
PUF60-218ENST00000531995 COL13A1Q5TAT6 717 aaPredicted RBP23.97■■□□□ 1.43
PUF60-218ENST00000531995 RNF123Q5XPI4 1314 aa23.97■■□□□ 1.43
PUF60-218ENST00000531995 C3orf67Q6ZVT6 689 aa23.97■■□□□ 1.43
PUF60-218ENST00000531995 SYNE4Q8N205 404 aa23.97■■□□□ 1.43
PUF60-218ENST00000531995 CHPF2Q9P2E5 772 aa23.96■■□□□ 1.43
PUF60-218ENST00000531995 ZBED9Q6R2W3 1325 aa23.95■■□□□ 1.42
PUF60-218ENST00000531995 TCERG1O14776 1098 aaKnown RBP23.95■■□□□ 1.42
PUF60-218ENST00000531995 HSPA1AP0DMV8 641 aaKnown RBP23.95■■□□□ 1.42
PUF60-218ENST00000531995 HSPA1BP0DMV9 641 aaKnown RBP23.95■■□□□ 1.42
PUF60-218ENST00000531995 GIGYF2Q6Y7W6 1299 aaKnown RBP23.95■■□□□ 1.42
PUF60-218ENST00000531995 LDHDQ86WU2 507 aa23.95■■□□□ 1.42
PUF60-218ENST00000531995 ZNF34Q8IZ26 560 aa23.95■■□□□ 1.42
PUF60-218ENST00000531995 DDX21Q9NR30 783 aaKnown RBP eCLIP23.95■■□□□ 1.42
PUF60-218ENST00000531995 MKRN1Q9UHC7 482 aaKnown RBP23.95■■□□□ 1.42
PUF60-218ENST00000531995 PPEF1O14829 653 aaPredicted RBP23.93■■□□□ 1.42
PUF60-218ENST00000531995 PSMD1Q99460 953 aa23.93■■□□□ 1.42
PUF60-218ENST00000531995 CREBZFQ9NS37 354 aa23.93■■□□□ 1.42
PUF60-218ENST00000531995 HACL1Q9UJ83 578 aa23.93■■□□□ 1.42
PUF60-218ENST00000531995 DBF4Q9UBU7 674 aaPredicted RBP23.92■■□□□ 1.42
PUF60-218ENST00000531995 PASKQ96RG2 1323 aa23.91■■□□□ 1.42
PUF60-218ENST00000531995 FZD9O00144 591 aa23.91■■□□□ 1.42
PUF60-218ENST00000531995 HOXA10P31260 410 aaPredicted RBP23.91■■□□□ 1.42
PUF60-218ENST00000531995 EPHX2P34913 555 aa23.91■■□□□ 1.42
PUF60-218ENST00000531995 PPP1R42Q7Z4L9 355 aa23.91■■□□□ 1.42
PUF60-218ENST00000531995 RBM17Q96I25 401 aaKnown RBP23.91■■□□□ 1.42
PUF60-218ENST00000531995 TAF1P21675 1872 aa23.91■■□□□ 1.42
PUF60-218ENST00000531995 DDX60Q8IY21 1712 aaKnown RBP23.9■■□□□ 1.42
PUF60-218ENST00000531995 PARP10Q53GL7 1025 aa23.9■■□□□ 1.42
PUF60-218ENST00000531995 CCDC30Q5VVM6 783 aa23.9■■□□□ 1.42
PUF60-218ENST00000531995 JDP2Q8WYK2 163 aa23.9■■□□□ 1.42
PUF60-218ENST00000531995 AIMP1Q12904 312 aaKnown RBP23.89■■□□□ 1.41
PUF60-218ENST00000531995 COPS6Q7L5N1 327 aa23.89■■□□□ 1.41
PUF60-218ENST00000531995 ZNF428Q96B54 188 aa23.89■■□□□ 1.41
PUF60-218ENST00000531995 CLEC11AQ9Y240 323 aa23.89■■□□□ 1.41
PUF60-218ENST00000531995 GJA3Q9Y6H8 435 aa23.89■■□□□ 1.41
PUF60-218ENST00000531995 GPC2Q8N158 579 aa23.88■■□□□ 1.41
PUF60-218ENST00000531995 XAGE3Q8WTP9 111 aa23.88■■□□□ 1.41
PUF60-218ENST00000531995 CRAMP1Q96RY5 1269 aa23.88■■□□□ 1.41
PUF60-218ENST00000531995 UTP14AQ9BVJ6 771 aaKnown RBP23.88■■□□□ 1.41
PUF60-218ENST00000531995 PHAXQ9H814 394 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms