RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 SYNE4Q8N205 404 aa23.42■■□□□ 1.34
PTPN11-204ENST00000531326 LRP10Q7Z4F1 713 aa23.41■■□□□ 1.34
PTPN11-204ENST00000531326 CREBZFQ9NS37 354 aa23.41■■□□□ 1.34
PTPN11-204ENST00000531326 ERBB4Q15303 1308 aa23.4■■□□□ 1.34
PTPN11-204ENST00000531326 FZD9O00144 591 aa23.4■■□□□ 1.34
PTPN11-204ENST00000531326 HSPA1AP0DMV8 641 aaKnown RBP23.4■■□□□ 1.34
PTPN11-204ENST00000531326 HSPA1BP0DMV9 641 aaKnown RBP23.4■■□□□ 1.34
PTPN11-204ENST00000531326 GIGYF2Q6Y7W6 1299 aaKnown RBP23.4■■□□□ 1.34
PTPN11-204ENST00000531326 SLC51AQ86UW1 340 aa23.4■■□□□ 1.34
PTPN11-204ENST00000531326 LDHDQ86WU2 507 aa23.4■■□□□ 1.34
PTPN11-204ENST00000531326 CCDC146Q8IYE0 955 aa23.4■■□□□ 1.34
PTPN11-204ENST00000531326 TSPYL4Q9UJ04 414 aa23.4■■□□□ 1.34
PTPN11-204ENST00000531326 COL4A5P29400 1685 aa23.4■■□□□ 1.34
PTPN11-204ENST00000531326 PASKQ96RG2 1323 aa23.39■■□□□ 1.34
PTPN11-204ENST00000531326 NTSR2O95665 410 aa23.39■■□□□ 1.33
PTPN11-204ENST00000531326 HOXA10P31260 410 aaPredicted RBP23.39■■□□□ 1.33
PTPN11-204ENST00000531326 PDIA6Q15084 440 aa23.39■■□□□ 1.33
PTPN11-204ENST00000531326 PSMD1Q99460 953 aa23.39■■□□□ 1.33
PTPN11-204ENST00000531326 ADAMTSL1Q8N6G6 1762 aa23.39■■□□□ 1.33
PTPN11-204ENST00000531326 RIPK4P57078 832 aa23.38■■□□□ 1.33
PTPN11-204ENST00000531326 C3orf67Q6ZVT6 689 aa23.38■■□□□ 1.33
PTPN11-204ENST00000531326 PROSER3Q2NL68 480 aa23.37■■□□□ 1.33
PTPN11-204ENST00000531326 RPGRQ92834 1020 aaKnown RBP23.37■■□□□ 1.33
PTPN11-204ENST00000531326 RUNDC1Q96C34 613 aa23.37■■□□□ 1.33
PTPN11-204ENST00000531326 MKRN1Q9UHC7 482 aaKnown RBP23.37■■□□□ 1.33
PTPN11-204ENST00000531326 HACL1Q9UJ83 578 aa23.37■■□□□ 1.33
PTPN11-204ENST00000531326 RNF123Q5XPI4 1314 aa23.36■■□□□ 1.33
PTPN11-204ENST00000531326 ITGBL1O95965 494 aaPredicted RBP23.36■■□□□ 1.33
PTPN11-204ENST00000531326 EIF2S2P20042 333 aaKnown RBP23.36■■□□□ 1.33
PTPN11-204ENST00000531326 EAPPQ56P03 285 aaPredicted RBP23.36■■□□□ 1.33
PTPN11-204ENST00000531326 ANXA1P04083 346 aa23.35■■□□□ 1.33
PTPN11-204ENST00000531326 EPHX2P34913 555 aa23.35■■□□□ 1.33
PTPN11-204ENST00000531326 TMPOP42166 694 aaKnown RBP23.35■■□□□ 1.33
PTPN11-204ENST00000531326 CC2D2BQ6DHV5 1058 aa23.35■■□□□ 1.33
PTPN11-204ENST00000531326 GPC2Q8N158 579 aa23.34■■□□□ 1.33
PTPN11-204ENST00000531326 CRAMP1Q96RY5 1269 aa23.34■■□□□ 1.33
PTPN11-204ENST00000531326 PPP1R42Q7Z4L9 355 aa23.33■■□□□ 1.33
PTPN11-204ENST00000531326 RBM17Q96I25 401 aaKnown RBP23.33■■□□□ 1.33
PTPN11-204ENST00000531326 BABAM1Q9NWV8 329 aa23.33■■□□□ 1.33
PTPN11-204ENST00000531326 CNTNAP1P78357 1384 aa23.32■■□□□ 1.32
PTPN11-204ENST00000531326 PPEF1O14829 653 aaPredicted RBP23.32■■□□□ 1.32
PTPN11-204ENST00000531326 PARP10Q53GL7 1025 aa23.32■■□□□ 1.32
PTPN11-204ENST00000531326 FAM9BQ8IZU0 186 aa23.32■■□□□ 1.32
PTPN11-204ENST00000531326 JDP2Q8WYK2 163 aa23.32■■□□□ 1.32
PTPN11-204ENST00000531326 LTBP1Q14766 1721 aa23.32■■□□□ 1.32
PTPN11-204ENST00000531326 TCERG1O14776 1098 aaKnown RBP23.31■■□□□ 1.32
PTPN11-204ENST00000531326 TNS4Q8IZW8 715 aa23.31■■□□□ 1.32
PTPN11-204ENST00000531326 CLEC11AQ9Y240 323 aa23.31■■□□□ 1.32
PTPN11-204ENST00000531326 ANKRD36CQ5JPF3 1778 aa23.31■■□□□ 1.32
PTPN11-204ENST00000531326 SLC10A5Q5PT55 438 aa23.3■■□□□ 1.32
PTPN11-204ENST00000531326 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
PTPN11-204ENST00000531326 NECTIN2Q92692 538 aa23.3■■□□□ 1.32
PTPN11-204ENST00000531326 LAMB2P55268 1798 aa23.29■■□□□ 1.32
PTPN11-204ENST00000531326 TMEM88BA6NKF7 163 aa23.29■■□□□ 1.32
PTPN11-204ENST00000531326 LMOD3Q0VAK6 560 aa23.29■■□□□ 1.32
PTPN11-204ENST00000531326 KRT24Q2M2I5 525 aa23.29■■□□□ 1.32
PTPN11-204ENST00000531326 GRIPAP1Q4V328 841 aa23.29■■□□□ 1.32
PTPN11-204ENST00000531326 MAP1SQ66K74 1059 aaPredicted RBP23.29■■□□□ 1.32
PTPN11-204ENST00000531326 NLRP3Q96P20 1036 aa23.29■■□□□ 1.32
PTPN11-204ENST00000531326 UTP14AQ9BVJ6 771 aaKnown RBP23.29■■□□□ 1.32
PTPN11-204ENST00000531326 GJA3Q9Y6H8 435 aa23.29■■□□□ 1.32
PTPN11-204ENST00000531326 APAF1O14727 1248 aa23.28■■□□□ 1.32
PTPN11-204ENST00000531326 EIF6P56537 245 aaKnown RBP23.28■■□□□ 1.32
PTPN11-204ENST00000531326 COPS6Q7L5N1 327 aa23.28■■□□□ 1.32
PTPN11-204ENST00000531326 LARGE2Q8N3Y3 721 aa23.28■■□□□ 1.32
PTPN11-204ENST00000531326 NEUROD2Q15784 382 aa23.27■■□□□ 1.32
PTPN11-204ENST00000531326 CNTROBQ8N137 903 aa23.27■■□□□ 1.32
PTPN11-204ENST00000531326 XAGE3Q8WTP9 111 aa23.27■■□□□ 1.32
PTPN11-204ENST00000531326 ABCC4O15439 1325 aa23.27■■□□□ 1.32
PTPN11-204ENST00000531326 CHL1O00533 1208 aa23.26■■□□□ 1.31
PTPN11-204ENST00000531326 SCNN1DP51172 638 aa23.26■■□□□ 1.31
PTPN11-204ENST00000531326 AIMP1Q12904 312 aaKnown RBP23.26■■□□□ 1.31
PTPN11-204ENST00000531326 NLRP10Q86W26 655 aa23.26■■□□□ 1.31
PTPN11-204ENST00000531326 TRIM35Q9UPQ4 493 aa23.26■■□□□ 1.31
PTPN11-204ENST00000531326 ATP6V0A2Q9Y487 856 aa23.26■■□□□ 1.31
PTPN11-204ENST00000531326 CAPN15O75808 1086 aa23.25■■□□□ 1.31
PTPN11-204ENST00000531326 VEGFBP49765 207 aa23.25■■□□□ 1.31
PTPN11-204ENST00000531326 HCLS1P14317 486 aaPredicted RBP23.24■■□□□ 1.31
PTPN11-204ENST00000531326 EPS15P42566 896 aa23.24■■□□□ 1.31
PTPN11-204ENST00000531326 AOC3Q16853 763 aa23.24■■□□□ 1.31
PTPN11-204ENST00000531326 DDX21Q9NR30 783 aaKnown RBP eCLIP23.24■■□□□ 1.31
PTPN11-204ENST00000531326 PPIP5K2O43314 1243 aa23.23■■□□□ 1.31
PTPN11-204ENST00000531326 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
PTPN11-204ENST00000531326 HSP90AB3PQ58FF7 597 aa23.23■■□□□ 1.31
PTPN11-204ENST00000531326 NIM1KQ8IY84 436 aa23.23■■□□□ 1.31
PTPN11-204ENST00000531326 TAF1P21675 1872 aa23.22■■□□□ 1.31
PTPN11-204ENST00000531326 FOXN1O15353 648 aa23.22■■□□□ 1.31
PTPN11-204ENST00000531326 LMOD1P29536 600 aaPredicted RBP23.22■■□□□ 1.31
PTPN11-204ENST00000531326 RTFDC1Q9BY42 306 aaPredicted RBP23.22■■□□□ 1.31
PTPN11-204ENST00000531326 CHPF2Q9P2E5 772 aa23.21■■□□□ 1.31
PTPN11-204ENST00000531326 LAS1LQ9Y4W2 734 aaKnown RBP23.21■■□□□ 1.31
PTPN11-204ENST00000531326 RASSF10A6NK89 507 aa23.2■■□□□ 1.3
PTPN11-204ENST00000531326 FMR1Q06787 632 aaKnown RBP eCLIP23.2■■□□□ 1.32e-18■□□□□ 9.7
PTPN11-204ENST00000531326 ZNF428Q96B54 188 aa23.2■■□□□ 1.3
PTPN11-204ENST00000531326 VPS33BQ9H267 617 aa23.2■■□□□ 1.3
PTPN11-204ENST00000531326 TRMT112Q9UI30 125 aaKnown RBP23.2■■□□□ 1.3
PTPN11-204ENST00000531326 SH3TC1Q8TE82 1336 aa23.19■■□□□ 1.3
PTPN11-204ENST00000531326 BBOX1O75936 387 aa23.19■■□□□ 1.3
PTPN11-204ENST00000531326 SP8Q8IXZ3 490 aa23.19■■□□□ 1.3
PTPN11-204ENST00000531326 TMX4Q9H1E5 349 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms