RNA–Protein interactions for RNA: ENST00000530604.1

RSF1-208, Transcript of remodeling and spacing factor 1, humanhuman

TSL 2

Gene RSF1, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-208ENST00000530604 PDIA6Q15084 440 aa23.04■■□□□ 1.28
RSF1-208ENST00000530604 RALBP1Q15311 655 aa23.04■■□□□ 1.28
RSF1-208ENST00000530604 RPGRQ92834 1020 aaKnown RBP23.04■■□□□ 1.28
RSF1-208ENST00000530604 PASKQ96RG2 1323 aa23.04■■□□□ 1.28
RSF1-208ENST00000530604 NTSR2O95665 410 aa23.03■■□□□ 1.28
RSF1-208ENST00000530604 BABAM1Q9NWV8 329 aa23.03■■□□□ 1.28
RSF1-208ENST00000530604 HACL1Q9UJ83 578 aa23.03■■□□□ 1.28
RSF1-208ENST00000530604 CRAMP1Q96RY5 1269 aa23.02■■□□□ 1.28
RSF1-208ENST00000530604 ITGBL1O95965 494 aaPredicted RBP23.01■■□□□ 1.27
RSF1-208ENST00000530604 EIF2S2P20042 333 aaKnown RBP23.01■■□□□ 1.27
RSF1-208ENST00000530604 TMPOP42166 694 aaKnown RBP23.01■■□□□ 1.27
RSF1-208ENST00000530604 GRIPAP1Q4V328 841 aa23.01■■□□□ 1.27
RSF1-208ENST00000530604 PPP1R42Q7Z4L9 355 aa23.01■■□□□ 1.27
RSF1-208ENST00000530604 GPC2Q8N158 579 aa23.01■■□□□ 1.27
RSF1-208ENST00000530604 EPHX2P34913 555 aa23■■□□□ 1.27
RSF1-208ENST00000530604 PARP10Q53GL7 1025 aa23■■□□□ 1.27
RSF1-208ENST00000530604 EAPPQ56P03 285 aaPredicted RBP23■■□□□ 1.27
RSF1-208ENST00000530604 C3orf67Q6ZVT6 689 aa23■■□□□ 1.27
RSF1-208ENST00000530604 JDP2Q8WYK2 163 aa23■■□□□ 1.27
RSF1-208ENST00000530604 RBM17Q96I25 401 aaKnown RBP23■■□□□ 1.27
RSF1-208ENST00000530604 MKRN1Q9UHC7 482 aaKnown RBP23■■□□□ 1.27
RSF1-208ENST00000530604 ADAMTSL1Q8N6G6 1762 aa22.99■■□□□ 1.27
RSF1-208ENST00000530604 PROSER3Q2NL68 480 aa22.99■■□□□ 1.27
RSF1-208ENST00000530604 PNMA8AQ86V59 439 aaPredicted RBP22.99■■□□□ 1.27
RSF1-208ENST00000530604 RNF123Q5XPI4 1314 aa22.99■■□□□ 1.27
RSF1-208ENST00000530604 COL4A5P29400 1685 aa22.98■■□□□ 1.27
RSF1-208ENST00000530604 LMOD3Q0VAK6 560 aa22.98■■□□□ 1.27
RSF1-208ENST00000530604 SLC10A5Q5PT55 438 aa22.98■■□□□ 1.27
RSF1-208ENST00000530604 PPEF1O14829 653 aaPredicted RBP22.97■■□□□ 1.27
RSF1-208ENST00000530604 ANXA1P04083 346 aa22.97■■□□□ 1.27
RSF1-208ENST00000530604 SLC51AQ86UW1 340 aa22.97■■□□□ 1.27
RSF1-208ENST00000530604 NLRP3Q96P20 1036 aa22.97■■□□□ 1.27
RSF1-208ENST00000530604 UTP14AQ9BVJ6 771 aaKnown RBP22.97■■□□□ 1.27
RSF1-208ENST00000530604 CLEC11AQ9Y240 323 aa22.97■■□□□ 1.27
RSF1-208ENST00000530604 TNS4Q8IZW8 715 aa22.96■■□□□ 1.27
RSF1-208ENST00000530604 CNTNAP1P78357 1384 aa22.96■■□□□ 1.27
RSF1-208ENST00000530604 TMEM88BA6NKF7 163 aa22.95■■□□□ 1.26
RSF1-208ENST00000530604 TCERG1O14776 1098 aaKnown RBP22.95■■□□□ 1.26
RSF1-208ENST00000530604 EIF6P56537 245 aaKnown RBP22.95■■□□□ 1.26
RSF1-208ENST00000530604 COPS6Q7L5N1 327 aa22.94■■□□□ 1.26
RSF1-208ENST00000530604 LARGE2Q8N3Y3 721 aa22.94■■□□□ 1.26
RSF1-208ENST00000530604 GJA3Q9Y6H8 435 aa22.94■■□□□ 1.26
RSF1-208ENST00000530604 MYBBP1AQ9BQG0 1328 aaKnown RBP22.93■■□□□ 1.26
RSF1-208ENST00000530604 CHL1O00533 1208 aa22.93■■□□□ 1.26
RSF1-208ENST00000530604 MAP1SQ66K74 1059 aaPredicted RBP22.93■■□□□ 1.26
RSF1-208ENST00000530604 CNTROBQ8N137 903 aa22.93■■□□□ 1.26
RSF1-208ENST00000530604 NECTIN2Q92692 538 aa22.93■■□□□ 1.26
RSF1-208ENST00000530604 ATP6V0A2Q9Y487 856 aa22.93■■□□□ 1.26
RSF1-208ENST00000530604 ANKRD36CQ5JPF3 1778 aa22.92■■□□□ 1.26
RSF1-208ENST00000530604 AIMP1Q12904 312 aaKnown RBP22.92■■□□□ 1.26
RSF1-208ENST00000530604 DDX10Q13206 875 aaKnown RBP22.92■■□□□ 1.26
RSF1-208ENST00000530604 NEUROD2Q15784 382 aa22.92■■□□□ 1.26
RSF1-208ENST00000530604 CCDC146Q8IYE0 955 aa22.92■■□□□ 1.26
RSF1-208ENST00000530604 XAGE3Q8WTP9 111 aa22.92■■□□□ 1.26
RSF1-208ENST00000530604 HSP90AB3PQ58FF7 597 aa22.91■■□□□ 1.26
RSF1-208ENST00000530604 NLRP10Q86W26 655 aa22.91■■□□□ 1.26
RSF1-208ENST00000530604 DDX21Q9NR30 783 aaKnown RBP eCLIP22.91■■□□□ 1.26
RSF1-208ENST00000530604 LTBP1Q14766 1721 aa22.91■■□□□ 1.26
RSF1-208ENST00000530604 ABCC4O15439 1325 aa22.9■■□□□ 1.26
RSF1-208ENST00000530604 SCNN1DP51172 638 aa22.9■■□□□ 1.26
RSF1-208ENST00000530604 TCIRG1Q13488 830 aa22.9■■□□□ 1.26
RSF1-208ENST00000530604 KRT24Q2M2I5 525 aa22.9■■□□□ 1.26
RSF1-208ENST00000530604 TMX4Q9H1E5 349 aaPredicted RBP22.9■■□□□ 1.26
RSF1-208ENST00000530604 VPS33BQ9H267 617 aa22.9■■□□□ 1.26
RSF1-208ENST00000530604 TRIM35Q9UPQ4 493 aa22.9■■□□□ 1.26
RSF1-208ENST00000530604 LAMB2P55268 1798 aa22.89■■□□□ 1.26
RSF1-208ENST00000530604 LMOD1P29536 600 aaPredicted RBP22.89■■□□□ 1.25
RSF1-208ENST00000530604 EPS15P42566 896 aa22.89■■□□□ 1.25
RSF1-208ENST00000530604 VEGFBP49765 207 aa22.89■■□□□ 1.25
RSF1-208ENST00000530604 NIM1KQ8IY84 436 aa22.89■■□□□ 1.25
RSF1-208ENST00000530604 RUNDC1Q96C34 613 aa22.89■■□□□ 1.25
RSF1-208ENST00000530604 PPIP5K2O43314 1243 aa22.88■■□□□ 1.25
RSF1-208ENST00000530604 BBOX1O75936 387 aa22.88■■□□□ 1.25
RSF1-208ENST00000530604 HCLS1P14317 486 aaPredicted RBP22.88■■□□□ 1.25
RSF1-208ENST00000530604 AOC3Q16853 763 aa22.88■■□□□ 1.25
RSF1-208ENST00000530604 RTFDC1Q9BY42 306 aaPredicted RBP22.88■■□□□ 1.25
RSF1-208ENST00000530604 SP8Q8IXZ3 490 aa22.87■■□□□ 1.25
RSF1-208ENST00000530604 TRMT112Q9UI30 125 aaKnown RBP22.87■■□□□ 1.25
RSF1-208ENST00000530604 LAS1LQ9Y4W2 734 aaKnown RBP22.87■■□□□ 1.25
RSF1-208ENST00000530604 FOXN1O15353 648 aa22.86■■□□□ 1.25
RSF1-208ENST00000530604 CAPN15O75808 1086 aa22.86■■□□□ 1.25
RSF1-208ENST00000530604 WDR43Q15061 677 aaKnown RBP eCLIP22.86■■□□□ 1.25
RSF1-208ENST00000530604 SUPT20HQ8NEM7 779 aa22.86■■□□□ 1.25
RSF1-208ENST00000530604 CHPF2Q9P2E5 772 aa22.86■■□□□ 1.25
RSF1-208ENST00000530604 SH3TC1Q8TE82 1336 aa22.85■■□□□ 1.25
RSF1-208ENST00000530604 RASSF10A6NK89 507 aa22.85■■□□□ 1.25
RSF1-208ENST00000530604 DEFB115Q30KQ5 88 aa22.85■■□□□ 1.25
RSF1-208ENST00000530604 USP50Q70EL3 339 aaPredicted RBP22.85■■□□□ 1.25
RSF1-208ENST00000530604 ZNRF3Q9ULT6 936 aa22.85■■□□□ 1.25
RSF1-208ENST00000530604 ADAMTS8Q9UP79 889 aa22.85■■□□□ 1.25
RSF1-208ENST00000530604 DPP8Q6V1X1 898 aaPredicted RBP22.84■■□□□ 1.25
RSF1-208ENST00000530604 DDX46Q7L014 1031 aaKnown RBP22.84■■□□□ 1.25
RSF1-208ENST00000530604 HOXB7P09629 217 aa22.83■■□□□ 1.25
RSF1-208ENST00000530604 CXCL9Q07325 125 aa22.83■■□□□ 1.25
RSF1-208ENST00000530604 HDGFL1Q5TGJ6 251 aa22.83■■□□□ 1.25
RSF1-208ENST00000530604 MPNDQ8N594 471 aa22.83■■□□□ 1.25
RSF1-208ENST00000530604 PLBD2Q8NHP8 589 aa22.83■■□□□ 1.25
RSF1-208ENST00000530604 GPRC5DQ9NZD1 345 aa22.83■■□□□ 1.25
RSF1-208ENST00000530604 TAF1P21675 1872 aa22.83■■□□□ 1.24
RSF1-208ENST00000530604 GRAPQ13588 217 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms