RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-209ENST00000530468 ZNF34Q8IZ26 560 aa20.5■□□□□ 0.87
TM9SF1-209ENST00000530468 LMOD3Q0VAK6 560 aa20.49■□□□□ 0.87
TM9SF1-209ENST00000530468 PARP10Q53GL7 1025 aa20.49■□□□□ 0.87
TM9SF1-209ENST00000530468 SUSD4Q5VX71 490 aa20.49■□□□□ 0.87
TM9SF1-209ENST00000530468 PPP1R42Q7Z4L9 355 aa20.49■□□□□ 0.87
TM9SF1-209ENST00000530468 JDP2Q8WYK2 163 aa20.49■□□□□ 0.87
TM9SF1-209ENST00000530468 NTSR2O95665 410 aa20.48■□□□□ 0.87
TM9SF1-209ENST00000530468 RIPK4P57078 832 aa20.48■□□□□ 0.87
TM9SF1-209ENST00000530468 GPC2Q8N158 579 aa20.48■□□□□ 0.87
TM9SF1-209ENST00000530468 RBM17Q96I25 401 aaKnown RBP20.48■□□□□ 0.87
TM9SF1-209ENST00000530468 CRAMP1Q96RY5 1269 aa20.48■□□□□ 0.87
TM9SF1-209ENST00000530468 PASKQ96RG2 1323 aa20.48■□□□□ 0.87
TM9SF1-209ENST00000530468 EPHX2P34913 555 aa20.47■□□□□ 0.87
TM9SF1-209ENST00000530468 EAPPQ56P03 285 aaPredicted RBP20.47■□□□□ 0.87
TM9SF1-209ENST00000530468 PNMA8AQ86V59 439 aaPredicted RBP20.47■□□□□ 0.87
TM9SF1-209ENST00000530468 LRP10Q7Z4F1 713 aa20.46■□□□□ 0.87
TM9SF1-209ENST00000530468 MKRN1Q9UHC7 482 aaKnown RBP20.46■□□□□ 0.87
TM9SF1-209ENST00000530468 PPEF1O14829 653 aaPredicted RBP20.45■□□□□ 0.86
TM9SF1-209ENST00000530468 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
TM9SF1-209ENST00000530468 EIF6P56537 245 aaKnown RBP20.45■□□□□ 0.86
TM9SF1-209ENST00000530468 TNS4Q8IZW8 715 aa20.45■□□□□ 0.86
TM9SF1-209ENST00000530468 RNF123Q5XPI4 1314 aa20.45■□□□□ 0.86
TM9SF1-209ENST00000530468 CNTNAP1P78357 1384 aa20.45■□□□□ 0.86
TM9SF1-209ENST00000530468 ITGBL1O95965 494 aaPredicted RBP20.44■□□□□ 0.86
TM9SF1-209ENST00000530468 TMPOP42166 694 aaKnown RBP20.44■□□□□ 0.86
TM9SF1-209ENST00000530468 PDIA6Q15084 440 aa20.44■□□□□ 0.86
TM9SF1-209ENST00000530468 NLRP3Q96P20 1036 aa20.44■□□□□ 0.86
TM9SF1-209ENST00000530468 CLEC11AQ9Y240 323 aa20.44■□□□□ 0.86
TM9SF1-209ENST00000530468 TMEM88BA6NKF7 163 aa20.43■□□□□ 0.86
TM9SF1-209ENST00000530468 UTP14AQ9BVJ6 771 aaKnown RBP20.43■□□□□ 0.86
TM9SF1-209ENST00000530468 TMX4Q9H1E5 349 aaPredicted RBP20.43■□□□□ 0.86
TM9SF1-209ENST00000530468 ADAMTSL1Q8N6G6 1762 aa20.43■□□□□ 0.86
TM9SF1-209ENST00000530468 HSP90AB3PQ58FF7 597 aa20.42■□□□□ 0.86
TM9SF1-209ENST00000530468 SLC10A5Q5PT55 438 aa20.42■□□□□ 0.86
TM9SF1-209ENST00000530468 LARGE2Q8N3Y3 721 aa20.42■□□□□ 0.86
TM9SF1-209ENST00000530468 PROSER3Q2NL68 480 aa20.41■□□□□ 0.86
TM9SF1-209ENST00000530468 C3orf67Q6ZVT6 689 aa20.41■□□□□ 0.86
TM9SF1-209ENST00000530468 COL4A5P29400 1685 aa20.4■□□□□ 0.86
TM9SF1-209ENST00000530468 LMOD1P29536 600 aaPredicted RBP20.4■□□□□ 0.86
TM9SF1-209ENST00000530468 CNTROBQ8N137 903 aa20.4■□□□□ 0.86
TM9SF1-209ENST00000530468 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
TM9SF1-209ENST00000530468 VPS33BQ9H267 617 aa20.4■□□□□ 0.86
TM9SF1-209ENST00000530468 GJA3Q9Y6H8 435 aa20.4■□□□□ 0.86
TM9SF1-209ENST00000530468 ANXA1P04083 346 aa20.39■□□□□ 0.85
TM9SF1-209ENST00000530468 NIM1KQ8IY84 436 aa20.39■□□□□ 0.85
TM9SF1-209ENST00000530468 ATP6V0A2Q9Y487 856 aa20.39■□□□□ 0.85
TM9SF1-209ENST00000530468 PCNTO95613 3336 aa20.38■□□□□ 0.85
TM9SF1-209ENST00000530468 TCERG1O14776 1098 aaKnown RBP20.38■□□□□ 0.85
TM9SF1-209ENST00000530468 MAP1SQ66K74 1059 aaPredicted RBP20.38■□□□□ 0.85
TM9SF1-209ENST00000530468 COPS6Q7L5N1 327 aa20.38■□□□□ 0.85
TM9SF1-209ENST00000530468 DDX21Q9NR30 783 aaKnown RBP eCLIP20.38■□□□□ 0.85
TM9SF1-209ENST00000530468 ABCC4O15439 1325 aa20.37■□□□□ 0.85
TM9SF1-209ENST00000530468 CHL1O00533 1208 aa20.37■□□□□ 0.85
TM9SF1-209ENST00000530468 PPIP5K2O43314 1243 aa20.37■□□□□ 0.85
TM9SF1-209ENST00000530468 AIMP1Q12904 312 aaKnown RBP20.37■□□□□ 0.85
TM9SF1-209ENST00000530468 SUPT20HQ8NEM7 779 aa20.37■□□□□ 0.85
TM9SF1-209ENST00000530468 XAGE3Q8WTP9 111 aa20.37■□□□□ 0.85
TM9SF1-209ENST00000530468 BBOX1O75936 387 aa20.36■□□□□ 0.85
TM9SF1-209ENST00000530468 VEGFBP49765 207 aa20.36■□□□□ 0.85
TM9SF1-209ENST00000530468 SCNN1DP51172 638 aa20.36■□□□□ 0.85
TM9SF1-209ENST00000530468 TCIRG1Q13488 830 aa20.36■□□□□ 0.85
TM9SF1-209ENST00000530468 NEUROD2Q15784 382 aa20.36■□□□□ 0.85
TM9SF1-209ENST00000530468 NLRP10Q86W26 655 aa20.36■□□□□ 0.85
TM9SF1-209ENST00000530468 NECTIN2Q92692 538 aa20.36■□□□□ 0.85
TM9SF1-209ENST00000530468 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
TM9SF1-209ENST00000530468 RASSF10A6NK89 507 aa20.35■□□□□ 0.85
TM9SF1-209ENST00000530468 WDR43Q15061 677 aaKnown RBP eCLIP20.35■□□□□ 0.85
TM9SF1-209ENST00000530468 USP50Q70EL3 339 aaPredicted RBP20.35■□□□□ 0.85
TM9SF1-209ENST00000530468 SLC51AQ86UW1 340 aa20.35■□□□□ 0.85
TM9SF1-209ENST00000530468 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
TM9SF1-209ENST00000530468 RTFDC1Q9BY42 306 aaPredicted RBP20.35■□□□□ 0.85
TM9SF1-209ENST00000530468 ANKRD36CQ5JPF3 1778 aa20.34■□□□□ 0.85
TM9SF1-209ENST00000530468 SH3TC1Q8TE82 1336 aa20.34■□□□□ 0.85
TM9SF1-209ENST00000530468 HOXB7P09629 217 aa20.34■□□□□ 0.85
TM9SF1-209ENST00000530468 EPS15P42566 896 aa20.34■□□□□ 0.85
TM9SF1-209ENST00000530468 DDX10Q13206 875 aaKnown RBP20.34■□□□□ 0.85
TM9SF1-209ENST00000530468 AOC3Q16853 763 aa20.34■□□□□ 0.85
TM9SF1-209ENST00000530468 SP8Q8IXZ3 490 aa20.34■□□□□ 0.85
TM9SF1-209ENST00000530468 AIDAQ96BJ3 306 aa20.34■□□□□ 0.85
TM9SF1-209ENST00000530468 TRMT112Q9UI30 125 aaKnown RBP20.34■□□□□ 0.85
TM9SF1-209ENST00000530468 LTBP1Q14766 1721 aa20.33■□□□□ 0.85
TM9SF1-209ENST00000530468 CAPN15O75808 1086 aa20.33■□□□□ 0.85
TM9SF1-209ENST00000530468 DEFB115Q30KQ5 88 aa20.33■□□□□ 0.85
TM9SF1-209ENST00000530468 DDX46Q7L014 1031 aaKnown RBP20.33■□□□□ 0.85
TM9SF1-209ENST00000530468 TRIM35Q9UPQ4 493 aa20.33■□□□□ 0.85
TM9SF1-209ENST00000530468 FOXN1O15353 648 aa20.32■□□□□ 0.84
TM9SF1-209ENST00000530468 HCLS1P14317 486 aaPredicted RBP20.32■□□□□ 0.84
TM9SF1-209ENST00000530468 KRT24Q2M2I5 525 aa20.32■□□□□ 0.84
TM9SF1-209ENST00000530468 DPP8Q6V1X1 898 aaPredicted RBP20.32■□□□□ 0.84
TM9SF1-209ENST00000530468 MPNDQ8N594 471 aa20.32■□□□□ 0.84
TM9SF1-209ENST00000530468 CHPF2Q9P2E5 772 aa20.32■□□□□ 0.84
TM9SF1-209ENST00000530468 ZNRF3Q9ULT6 936 aa20.32■□□□□ 0.84
TM9SF1-209ENST00000530468 LAS1LQ9Y4W2 734 aaKnown RBP20.32■□□□□ 0.84
TM9SF1-209ENST00000530468 GRAPQ13588 217 aa20.31■□□□□ 0.84
TM9SF1-209ENST00000530468 HDGFL1Q5TGJ6 251 aa20.31■□□□□ 0.84
TM9SF1-209ENST00000530468 TMC4Q7Z404 712 aa20.31■□□□□ 0.84
TM9SF1-209ENST00000530468 PLBD2Q8NHP8 589 aa20.31■□□□□ 0.84
TM9SF1-209ENST00000530468 GRAPLQ8TC17 118 aaPredicted RBP20.31■□□□□ 0.84
TM9SF1-209ENST00000530468 PRDM10Q9NQV6 1147 aa20.31■□□□□ 0.84
TM9SF1-209ENST00000530468 CTCFP49711 727 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms