RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 PDGFDQ9GZP0 370 aaPredicted RBP8.07□□□□□ -1.12
LINC01001-202ENST00000527683 NWD2Q9ULI1 1742 aa8.06□□□□□ -1.12
LINC01001-202ENST00000527683 CAMTA1Q9Y6Y1 1673 aa8.06□□□□□ -1.12
LINC01001-202ENST00000527683 DGAT1O75907 488 aa8.06□□□□□ -1.12
LINC01001-202ENST00000527683 SRPK2P78362 688 aaKnown RBP8.06□□□□□ -1.12
LINC01001-202ENST00000527683 MARCH10Q8NA82 808 aaPredicted RBP8.06□□□□□ -1.12
LINC01001-202ENST00000527683 LRRN4Q8WUT4 740 aa8.06□□□□□ -1.12
LINC01001-202ENST00000527683 L3MBTL2Q969R5 705 aa8.06□□□□□ -1.12
LINC01001-202ENST00000527683 PPP1R1BQ9UD71 204 aaPredicted RBP8.06□□□□□ -1.12
LINC01001-202ENST00000527683 DDB1Q16531 1140 aa8.05□□□□□ -1.12
LINC01001-202ENST00000527683 TOM1L2Q6ZVM7 507 aa8.05□□□□□ -1.12
LINC01001-202ENST00000527683 ZNF511Q8NB15 262 aa8.05□□□□□ -1.12
LINC01001-202ENST00000527683 FOXJ1Q92949 421 aa8.05□□□□□ -1.12
LINC01001-202ENST00000527683 AAASQ9NRG9 546 aa8.05□□□□□ -1.12
LINC01001-202ENST00000527683 ATP7BP35670 1465 aa8.05□□□□□ -1.12
LINC01001-202ENST00000527683 ADGRB2O60241 1585 aa8.05□□□□□ -1.12
LINC01001-202ENST00000527683 RGPD8O14715 1765 aaPredicted RBP8.05□□□□□ -1.12
LINC01001-202ENST00000527683 COL14A1Q05707 1796 aaKnown RBP8.05□□□□□ -1.12
LINC01001-202ENST00000527683 TRPM1Q7Z4N2 1603 aa8.04□□□□□ -1.12
LINC01001-202ENST00000527683 AVPP01185 164 aa8.04□□□□□ -1.12
LINC01001-202ENST00000527683 CTHP32929 405 aa8.04□□□□□ -1.12
LINC01001-202ENST00000527683 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
LINC01001-202ENST00000527683 ARHGEF25Q86VW2 580 aa8.04□□□□□ -1.12
LINC01001-202ENST00000527683 CYP4X1Q8N118 509 aa8.04□□□□□ -1.12
LINC01001-202ENST00000527683 SNIP1Q8TAD8 396 aaKnown RBP8.04□□□□□ -1.12
LINC01001-202ENST00000527683 EPS8L1Q8TE68 723 aa8.04□□□□□ -1.12
LINC01001-202ENST00000527683 AATKQ6ZMQ8 1374 aa8.04□□□□□ -1.12
LINC01001-202ENST00000527683 PLCH1Q4KWH8 1693 aa8.04□□□□□ -1.12
LINC01001-202ENST00000527683 TRPM3Q9HCF6 1732 aaPredicted RBP8.03□□□□□ -1.12
LINC01001-202ENST00000527683 IFT172Q9UG01 1749 aa8.03□□□□□ -1.12
LINC01001-202ENST00000527683 ALS2Q96Q42 1657 aa8.03□□□□□ -1.12
LINC01001-202ENST00000527683 THSD7AQ9UPZ6 1657 aa8.03□□□□□ -1.12
LINC01001-202ENST00000527683 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
LINC01001-202ENST00000527683 ZBTB7AO95365 584 aa8.03□□□□□ -1.12
LINC01001-202ENST00000527683 EIF4G2P78344 907 aaKnown RBP eCLIP8.03□□□□□ -1.12
LINC01001-202ENST00000527683 HPS1Q92902 700 aa8.03□□□□□ -1.12
LINC01001-202ENST00000527683 CDCA7Q9BWT1 371 aaPredicted RBP8.03□□□□□ -1.12
LINC01001-202ENST00000527683 CARD10Q9BWT7 1032 aa8.03□□□□□ -1.12
LINC01001-202ENST00000527683 HMX1Q9NP08 348 aaPredicted RBP8.03□□□□□ -1.12
LINC01001-202ENST00000527683 NRAPQ86VF7 1730 aa8.03□□□□□ -1.12
LINC01001-202ENST00000527683 CENPJQ9HC77 1338 aaPredicted RBP8.03□□□□□ -1.12
LINC01001-202ENST00000527683 BRD4O60885 1362 aaPredicted RBP8.02□□□□□ -1.13
LINC01001-202ENST00000527683 EXOC5O00471 708 aa8.02□□□□□ -1.13
LINC01001-202ENST00000527683 TXNRD1Q16881 649 aa8.02□□□□□ -1.13
LINC01001-202ENST00000527683 SYT17Q9BSW7 474 aa8.02□□□□□ -1.13
LINC01001-202ENST00000527683 KIAA1210Q9ULL0 1709 aa8.02□□□□□ -1.13
LINC01001-202ENST00000527683 CRB1P82279 1406 aa8.02□□□□□ -1.13
LINC01001-202ENST00000527683 COL5A2P05997 1499 aaPredicted RBP8.01□□□□□ -1.13
LINC01001-202ENST00000527683 NINLQ9Y2I6 1382 aa8.01□□□□□ -1.13
LINC01001-202ENST00000527683 TTC24A2A3L6 582 aaPredicted RBP8.01□□□□□ -1.13
LINC01001-202ENST00000527683 RFC5P40937 340 aa8.01□□□□□ -1.13
LINC01001-202ENST00000527683 SLC15A2Q16348 729 aa8.01□□□□□ -1.13
LINC01001-202ENST00000527683 ZNF784Q8NCA9 323 aaPredicted RBP8.01□□□□□ -1.13
LINC01001-202ENST00000527683 GOPCQ9HD26 462 aa8.01□□□□□ -1.13
LINC01001-202ENST00000527683 PPIP5K1Q6PFW1 1433 aa8.01□□□□□ -1.13
LINC01001-202ENST00000527683 TTC21BQ7Z4L5 1316 aa8.01□□□□□ -1.13
LINC01001-202ENST00000527683 WDR17Q8IZU2 1322 aa8.01□□□□□ -1.13
LINC01001-202ENST00000527683 KCNH5Q8NCM2 988 aa8□□□□□ -1.13
LINC01001-202ENST00000527683 EHBP1Q8NDI1 1231 aa8□□□□□ -1.13
LINC01001-202ENST00000527683 OCSTAMPQ9BR26 566 aa8□□□□□ -1.13
LINC01001-202ENST00000527683 STK32BQ9NY57 414 aa8□□□□□ -1.13
LINC01001-202ENST00000527683 TLL2Q9Y6L7 1015 aa8□□□□□ -1.13
LINC01001-202ENST00000527683 BCL9O00512 1426 aa8□□□□□ -1.13
LINC01001-202ENST00000527683 OVOS2A0A0G2JMS6 1433 aa7.99□□□□□ -1.13
LINC01001-202ENST00000527683 OVOS2A0A0J9YW53 1432 aa7.99□□□□□ -1.13
LINC01001-202ENST00000527683 CSB-PGBD3P0DP91 1061 aa7.99□□□□□ -1.13
LINC01001-202ENST00000527683 HSPA5P11021 654 aaKnown RBP7.99□□□□□ -1.13
LINC01001-202ENST00000527683 USP6P35125 1406 aa7.99□□□□□ -1.13
LINC01001-202ENST00000527683 NR6A1Q15406 480 aa7.99□□□□□ -1.13
LINC01001-202ENST00000527683 OVOS2Q6IE36 1432 aa7.99□□□□□ -1.13
LINC01001-202ENST00000527683 CRIPAKQ8N1N5 446 aa7.99□□□□□ -1.13
LINC01001-202ENST00000527683 HELBQ8NG08 1087 aaPredicted RBP7.99□□□□□ -1.13
LINC01001-202ENST00000527683 ABCA3Q99758 1704 aa7.99□□□□□ -1.13
LINC01001-202ENST00000527683 FHDC1Q9C0D6 1143 aaPredicted RBP7.99□□□□□ -1.13
LINC01001-202ENST00000527683 EVC2Q86UK5 1308 aa7.99□□□□□ -1.13
LINC01001-202ENST00000527683 AP1G2O75843 785 aa7.98□□□□□ -1.13
LINC01001-202ENST00000527683 ALDH1A1P00352 501 aa7.98□□□□□ -1.13
LINC01001-202ENST00000527683 SH3RF1Q7Z6J0 888 aa7.98□□□□□ -1.13
LINC01001-202ENST00000527683 MTFR1LQ9H019 292 aa7.98□□□□□ -1.13
LINC01001-202ENST00000527683 RGPD1P0DJD0 1748 aa7.98□□□□□ -1.13
LINC01001-202ENST00000527683 USP47Q96K76 1375 aa7.97□□□□□ -1.13
LINC01001-202ENST00000527683 CENPBP07199 599 aaPredicted RBP7.97□□□□□ -1.13
LINC01001-202ENST00000527683 SH3BP5LQ7L8J4 393 aa7.97□□□□□ -1.13
LINC01001-202ENST00000527683 ACSBG1Q96GR2 724 aa7.97□□□□□ -1.13
LINC01001-202ENST00000527683 TRIM34Q9BYJ4 488 aa7.97□□□□□ -1.13
LINC01001-202ENST00000527683 USP17L8P0C7I0 530 aa7.96□□□□□ -1.14
LINC01001-202ENST00000527683 SMCPP49901 116 aaPredicted RBP7.96□□□□□ -1.14
LINC01001-202ENST00000527683 ARXQ96QS3 562 aa7.96□□□□□ -1.14
LINC01001-202ENST00000527683 LRRC4BQ9NT99 713 aa7.96□□□□□ -1.14
LINC01001-202ENST00000527683 TTC21AQ8NDW8 1320 aa7.96□□□□□ -1.14
LINC01001-202ENST00000527683 ROCK2O75116 1388 aaKnown RBP7.96□□□□□ -1.14
LINC01001-202ENST00000527683 CCDC7Q96M83 1385 aa7.96□□□□□ -1.14
LINC01001-202ENST00000527683 TNS1Q9HBL0 1735 aaKnown RBP7.95□□□□□ -1.14
LINC01001-202ENST00000527683 CRYBG1Q9Y4K1 1723 aa7.95□□□□□ -1.14
LINC01001-202ENST00000527683 VARSP26640 1264 aaKnown RBP7.95□□□□□ -1.14
LINC01001-202ENST00000527683 DDX10Q13206 875 aaKnown RBP7.95□□□□□ -1.14
LINC01001-202ENST00000527683 C1QTNF2Q9BXJ5 285 aa7.95□□□□□ -1.14
LINC01001-202ENST00000527683 NLRP2Q9NX02 1062 aa7.95□□□□□ -1.14
LINC01001-202ENST00000527683 LMO7Q8WWI1 1683 aa7.95□□□□□ -1.14
LINC01001-202ENST00000527683 IL2RBP14784 551 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms