RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 ITGBL1O95965 494 aaPredicted RBP19.78■□□□□ 0.76
LTBP3-206ENST00000526825 IBTKQ9P2D0 1353 aaPredicted RBP19.78■□□□□ 0.76
LTBP3-206ENST00000526825 RIC1Q4ADV7 1423 aa19.77■□□□□ 0.76
LTBP3-206ENST00000526825 SCN4AP35499 1836 aa19.77■□□□□ 0.76
LTBP3-206ENST00000526825 NTSR2O95665 410 aa19.77■□□□□ 0.76
LTBP3-206ENST00000526825 EIF2S2P20042 333 aaKnown RBP19.77■□□□□ 0.76
LTBP3-206ENST00000526825 TMPOP42166 694 aaKnown RBP19.77■□□□□ 0.76
LTBP3-206ENST00000526825 CRAMP1Q96RY5 1269 aa19.77■□□□□ 0.76
LTBP3-206ENST00000526825 HACL1Q9UJ83 578 aa19.77■□□□□ 0.76
LTBP3-206ENST00000526825 HSPA1AP0DMV8 641 aaKnown RBP19.76■□□□□ 0.75
LTBP3-206ENST00000526825 HSPA1BP0DMV9 641 aaKnown RBP19.76■□□□□ 0.75
LTBP3-206ENST00000526825 SLC10A5Q5PT55 438 aa19.76■□□□□ 0.75
LTBP3-206ENST00000526825 C3orf67Q6ZVT6 689 aa19.76■□□□□ 0.75
LTBP3-206ENST00000526825 RPGRQ92834 1020 aaKnown RBP19.76■□□□□ 0.75
LTBP3-206ENST00000526825 PROSER3Q2NL68 480 aa19.75■□□□□ 0.75
LTBP3-206ENST00000526825 GRIPAP1Q4V328 841 aa19.75■□□□□ 0.75
LTBP3-206ENST00000526825 PARP10Q53GL7 1025 aa19.75■□□□□ 0.75
LTBP3-206ENST00000526825 PPP1R42Q7Z4L9 355 aa19.75■□□□□ 0.75
LTBP3-206ENST00000526825 GPC2Q8N158 579 aa19.75■□□□□ 0.75
LTBP3-206ENST00000526825 RBM17Q96I25 401 aaKnown RBP19.75■□□□□ 0.75
LTBP3-206ENST00000526825 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
LTBP3-206ENST00000526825 ANXA1P04083 346 aa19.74■□□□□ 0.75
LTBP3-206ENST00000526825 EPHX2P34913 555 aa19.74■□□□□ 0.75
LTBP3-206ENST00000526825 JDP2Q8WYK2 163 aa19.74■□□□□ 0.75
LTBP3-206ENST00000526825 MKRN1Q9UHC7 482 aaKnown RBP19.74■□□□□ 0.75
LTBP3-206ENST00000526825 EAPPQ56P03 285 aaPredicted RBP19.73■□□□□ 0.75
LTBP3-206ENST00000526825 SLC51AQ86UW1 340 aa19.73■□□□□ 0.75
LTBP3-206ENST00000526825 NLRP3Q96P20 1036 aa19.73■□□□□ 0.75
LTBP3-206ENST00000526825 RNF123Q5XPI4 1314 aa19.73■□□□□ 0.75
LTBP3-206ENST00000526825 PNMA8AQ86V59 439 aaPredicted RBP19.72■□□□□ 0.75
LTBP3-206ENST00000526825 UTP14AQ9BVJ6 771 aaKnown RBP19.72■□□□□ 0.75
LTBP3-206ENST00000526825 CHL1O00533 1208 aa19.71■□□□□ 0.75
LTBP3-206ENST00000526825 LMOD3Q0VAK6 560 aa19.71■□□□□ 0.75
LTBP3-206ENST00000526825 COPS6Q7L5N1 327 aa19.71■□□□□ 0.75
LTBP3-206ENST00000526825 CLEC11AQ9Y240 323 aa19.71■□□□□ 0.75
LTBP3-206ENST00000526825 TMEM88BA6NKF7 163 aa19.7■□□□□ 0.74
LTBP3-206ENST00000526825 TCERG1O14776 1098 aaKnown RBP19.7■□□□□ 0.74
LTBP3-206ENST00000526825 PPEF1O14829 653 aaPredicted RBP19.7■□□□□ 0.74
LTBP3-206ENST00000526825 EIF6P56537 245 aaKnown RBP19.7■□□□□ 0.74
LTBP3-206ENST00000526825 CCDC146Q8IYE0 955 aa19.7■□□□□ 0.74
LTBP3-206ENST00000526825 TNS4Q8IZW8 715 aa19.7■□□□□ 0.74
LTBP3-206ENST00000526825 CNTROBQ8N137 903 aa19.7■□□□□ 0.74
LTBP3-206ENST00000526825 COL4A5P29400 1685 aa19.7■□□□□ 0.74
LTBP3-206ENST00000526825 LARGE2Q8N3Y3 721 aa19.69■□□□□ 0.74
LTBP3-206ENST00000526825 XAGE3Q8WTP9 111 aa19.69■□□□□ 0.74
LTBP3-206ENST00000526825 NECTIN2Q92692 538 aa19.69■□□□□ 0.74
LTBP3-206ENST00000526825 PRKRIP1Q9H875 184 aaPredicted RBP19.69■□□□□ 0.74
LTBP3-206ENST00000526825 TRIM35Q9UPQ4 493 aa19.69■□□□□ 0.74
LTBP3-206ENST00000526825 ATP6V0A2Q9Y487 856 aa19.69■□□□□ 0.74
LTBP3-206ENST00000526825 CNTNAP1P78357 1384 aa19.69■□□□□ 0.74
LTBP3-206ENST00000526825 AIMP1Q12904 312 aaKnown RBP19.68■□□□□ 0.74
LTBP3-206ENST00000526825 TCIRG1Q13488 830 aa19.68■□□□□ 0.74
LTBP3-206ENST00000526825 NEUROD2Q15784 382 aa19.68■□□□□ 0.74
LTBP3-206ENST00000526825 KRT24Q2M2I5 525 aa19.68■□□□□ 0.74
LTBP3-206ENST00000526825 MAP1SQ66K74 1059 aaPredicted RBP19.68■□□□□ 0.74
LTBP3-206ENST00000526825 NLRP10Q86W26 655 aa19.68■□□□□ 0.74
LTBP3-206ENST00000526825 DDX21Q9NR30 783 aaKnown RBP eCLIP19.68■□□□□ 0.74
LTBP3-206ENST00000526825 GJA3Q9Y6H8 435 aa19.68■□□□□ 0.74
LTBP3-206ENST00000526825 ADAMTSL1Q8N6G6 1762 aa19.67■□□□□ 0.74
LTBP3-206ENST00000526825 SCNN1DP51172 638 aa19.67■□□□□ 0.74
LTBP3-206ENST00000526825 HSP90AB3PQ58FF7 597 aa19.67■□□□□ 0.74
LTBP3-206ENST00000526825 VPS33BQ9H267 617 aa19.67■□□□□ 0.74
LTBP3-206ENST00000526825 BBOX1O75936 387 aa19.66■□□□□ 0.74
LTBP3-206ENST00000526825 ZEB1P37275 1124 aaPredicted RBP19.66■□□□□ 0.74
LTBP3-206ENST00000526825 EPS15P42566 896 aa19.66■□□□□ 0.74
LTBP3-206ENST00000526825 VEGFBP49765 207 aa19.66■□□□□ 0.74
LTBP3-206ENST00000526825 RUNDC1Q96C34 613 aa19.66■□□□□ 0.74
LTBP3-206ENST00000526825 RTFDC1Q9BY42 306 aaPredicted RBP19.66■□□□□ 0.74
LTBP3-206ENST00000526825 ABCC4O15439 1325 aa19.66■□□□□ 0.74
LTBP3-206ENST00000526825 HCLS1P14317 486 aaPredicted RBP19.65■□□□□ 0.74
LTBP3-206ENST00000526825 SP8Q8IXZ3 490 aa19.65■□□□□ 0.74
LTBP3-206ENST00000526825 PPIP5K2O43314 1243 aa19.64■□□□□ 0.73
LTBP3-206ENST00000526825 NIM1KQ8IY84 436 aa19.64■□□□□ 0.73
LTBP3-206ENST00000526825 TMX4Q9H1E5 349 aaPredicted RBP19.64■□□□□ 0.73
LTBP3-206ENST00000526825 TRMT112Q9UI30 125 aaKnown RBP19.64■□□□□ 0.73
LTBP3-206ENST00000526825 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.73
LTBP3-206ENST00000526825 LMOD1P29536 600 aaPredicted RBP19.63■□□□□ 0.73
LTBP3-206ENST00000526825 AOC3Q16853 763 aa19.63■□□□□ 0.73
LTBP3-206ENST00000526825 LAS1LQ9Y4W2 734 aaKnown RBP19.63■□□□□ 0.73
LTBP3-206ENST00000526825 LTBP1Q14766 1721 aa19.62■□□□□ 0.73
LTBP3-206ENST00000526825 RASSF10A6NK89 507 aa19.62■□□□□ 0.73
LTBP3-206ENST00000526825 FOXN1O15353 648 aa19.62■□□□□ 0.73
LTBP3-206ENST00000526825 CXCL9Q07325 125 aa19.62■□□□□ 0.73
LTBP3-206ENST00000526825 DEFB115Q30KQ5 88 aa19.62■□□□□ 0.73
LTBP3-206ENST00000526825 CCDC184Q52MB2 194 aa19.62■□□□□ 0.73
LTBP3-206ENST00000526825 USP50Q70EL3 339 aaPredicted RBP19.62■□□□□ 0.73
LTBP3-206ENST00000526825 SUPT20HQ8NEM7 779 aa19.62■□□□□ 0.73
LTBP3-206ENST00000526825 CHPF2Q9P2E5 772 aa19.62■□□□□ 0.73
LTBP3-206ENST00000526825 ZNRF3Q9ULT6 936 aa19.62■□□□□ 0.73
LTBP3-206ENST00000526825 SH3TC1Q8TE82 1336 aa19.61■□□□□ 0.73
LTBP3-206ENST00000526825 HOXB7P09629 217 aa19.61■□□□□ 0.73
LTBP3-206ENST00000526825 MPNDQ8N594 471 aa19.61■□□□□ 0.73
LTBP3-206ENST00000526825 CAPN15O75808 1086 aa19.6■□□□□ 0.73
LTBP3-206ENST00000526825 FMR1Q06787 632 aaKnown RBP eCLIP19.6■□□□□ 0.73
LTBP3-206ENST00000526825 GRAPQ13588 217 aa19.6■□□□□ 0.73
LTBP3-206ENST00000526825 WDR43Q15061 677 aaKnown RBP eCLIP19.6■□□□□ 0.73
LTBP3-206ENST00000526825 HDGFL1Q5TGJ6 251 aa19.6■□□□□ 0.73
LTBP3-206ENST00000526825 DPP8Q6V1X1 898 aaPredicted RBP19.6■□□□□ 0.73
LTBP3-206ENST00000526825 ANKRD13DQ6ZTN6 518 aa19.6■□□□□ 0.73
LTBP3-206ENST00000526825 DDX46Q7L014 1031 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms