RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 UBN2Q6ZU65 1347 aa15.48■□□□□ 0.07
CAPN1-204ENST00000526468 PASKQ96RG2 1323 aa15.48■□□□□ 0.07
CAPN1-204ENST00000526468 ALDH1B1P30837 517 aa15.48■□□□□ 0.07
CAPN1-204ENST00000526468 TTLL7Q6ZT98 887 aa15.48■□□□□ 0.07
CAPN1-204ENST00000526468 SPEF2Q9C093 1822 aa15.47■□□□□ 0.07
CAPN1-204ENST00000526468 POLR2AP24928 1970 aaKnown RBP15.47■□□□□ 0.07
CAPN1-204ENST00000526468 ERVV-1B6SEH8 477 aa15.47■□□□□ 0.07
CAPN1-204ENST00000526468 EPHX2P34913 555 aa15.47■□□□□ 0.07
CAPN1-204ENST00000526468 EIF4A1P60842 406 aaKnown RBP15.47■□□□□ 0.07
CAPN1-204ENST00000526468 CRY2Q49AN0 593 aa15.47■□□□□ 0.07
CAPN1-204ENST00000526468 SYNE4Q8N205 404 aa15.47■□□□□ 0.07
CAPN1-204ENST00000526468 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
CAPN1-204ENST00000526468 DIEXFQ68CQ4 756 aaKnown RBP15.46■□□□□ 0.07
CAPN1-204ENST00000526468 JDP2Q8WYK2 163 aa15.46■□□□□ 0.07
CAPN1-204ENST00000526468 PLEKHF1Q96S99 279 aa15.46■□□□□ 0.07
CAPN1-204ENST00000526468 MYH3P11055 1940 aa15.46■□□□□ 0.07
CAPN1-204ENST00000526468 ERBB4Q15303 1308 aa15.45■□□□□ 0.06
CAPN1-204ENST00000526468 PSMD1Q99460 953 aa15.45■□□□□ 0.06
CAPN1-204ENST00000526468 TMEM88BA6NKF7 163 aa15.44■□□□□ 0.06
CAPN1-204ENST00000526468 FZD9O00144 591 aa15.44■□□□□ 0.06
CAPN1-204ENST00000526468 PPEF1O14829 653 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-204ENST00000526468 GPC2Q8N158 579 aa15.44■□□□□ 0.06
CAPN1-204ENST00000526468 TSPYL4Q9UJ04 414 aa15.44■□□□□ 0.06
CAPN1-204ENST00000526468 GJA3Q9Y6H8 435 aa15.44■□□□□ 0.06
CAPN1-204ENST00000526468 PSME4Q14997 1843 aa15.44■□□□□ 0.06
CAPN1-204ENST00000526468 TCERG1O14776 1098 aaKnown RBP15.43■□□□□ 0.06
CAPN1-204ENST00000526468 NTSR2O95665 410 aa15.43■□□□□ 0.06
CAPN1-204ENST00000526468 LMOD1P29536 600 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-204ENST00000526468 EIF6P56537 245 aaKnown RBP15.43■□□□□ 0.06
CAPN1-204ENST00000526468 CC2D2BQ6DHV5 1058 aa15.43■□□□□ 0.06
CAPN1-204ENST00000526468 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
CAPN1-204ENST00000526468 PNMA8AQ86V59 439 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-204ENST00000526468 LARGE2Q8N3Y3 721 aa15.43■□□□□ 0.06
CAPN1-204ENST00000526468 RBM17Q96I25 401 aaKnown RBP15.43■□□□□ 0.06
CAPN1-204ENST00000526468 PNNQ9H307 717 aaKnown RBP15.43■□□□□ 0.06
CAPN1-204ENST00000526468 DUOX1Q9NRD9 1551 aa15.42■□□□□ 0.06
CAPN1-204ENST00000526468 SUSD4Q5VX71 490 aa15.42■□□□□ 0.06
CAPN1-204ENST00000526468 MAP1SQ66K74 1059 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-204ENST00000526468 AIDAQ96BJ3 306 aa15.42■□□□□ 0.06
CAPN1-204ENST00000526468 HOXA10P31260 410 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-204ENST00000526468 GIGYF2Q6Y7W6 1299 aaKnown RBP15.41■□□□□ 0.06
CAPN1-204ENST00000526468 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
CAPN1-204ENST00000526468 PPP1R42Q7Z4L9 355 aa15.41■□□□□ 0.06
CAPN1-204ENST00000526468 ZNF34Q8IZ26 560 aa15.41■□□□□ 0.06
CAPN1-204ENST00000526468 CASP8AP2Q9UKL3 1982 aa15.4■□□□□ 0.06
CAPN1-204ENST00000526468 FOXN1O15353 648 aa15.4■□□□□ 0.06
CAPN1-204ENST00000526468 PPIP5K2O43314 1243 aa15.4■□□□□ 0.06
CAPN1-204ENST00000526468 ITGBL1O95965 494 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-204ENST00000526468 EIF2S2P20042 333 aaKnown RBP15.4■□□□□ 0.06
CAPN1-204ENST00000526468 VEGFBP49765 207 aa15.4■□□□□ 0.06
CAPN1-204ENST00000526468 PARP10Q53GL7 1025 aa15.4■□□□□ 0.06
CAPN1-204ENST00000526468 NIM1KQ8IY84 436 aa15.4■□□□□ 0.06
CAPN1-204ENST00000526468 ABT1Q9ULW3 272 aaKnown RBP15.4■□□□□ 0.06
CAPN1-204ENST00000526468 SCN9AQ15858 1988 aa15.4■□□□□ 0.06
CAPN1-204ENST00000526468 ABCC4O15439 1325 aa15.4■□□□□ 0.06
CAPN1-204ENST00000526468 AKAP11Q9UKA4 1901 aa15.39■□□□□ 0.05
CAPN1-204ENST00000526468 ANXA1P04083 346 aa15.39■□□□□ 0.05
CAPN1-204ENST00000526468 PROSER3Q2NL68 480 aa15.39■□□□□ 0.05
CAPN1-204ENST00000526468 GRIPAP1Q4V328 841 aa15.39■□□□□ 0.05
CAPN1-204ENST00000526468 CNTROBQ8N137 903 aa15.39■□□□□ 0.05
CAPN1-204ENST00000526468 CRAMP1Q96RY5 1269 aa15.39■□□□□ 0.05
CAPN1-204ENST00000526468 TMX4Q9H1E5 349 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-204ENST00000526468 SCNN1DP51172 638 aa15.38■□□□□ 0.05
CAPN1-204ENST00000526468 RIPK4P57078 832 aa15.38■□□□□ 0.05
CAPN1-204ENST00000526468 LMOD3Q0VAK6 560 aa15.38■□□□□ 0.05
CAPN1-204ENST00000526468 PAXIP1Q6ZW49 1069 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-204ENST00000526468 UTP14AQ9BVJ6 771 aaKnown RBP15.38■□□□□ 0.05
CAPN1-204ENST00000526468 COL4A1P02462 1669 aa15.38■□□□□ 0.05
CAPN1-204ENST00000526468 AOC3Q16853 763 aa15.37■□□□□ 0.05
CAPN1-204ENST00000526468 NECTIN2Q92692 538 aa15.37■□□□□ 0.05
CAPN1-204ENST00000526468 NLRP3Q96P20 1036 aa15.37■□□□□ 0.05
CAPN1-204ENST00000526468 RASSF10A6NK89 507 aa15.36■□□□□ 0.05
CAPN1-204ENST00000526468 CTCFP49711 727 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-204ENST00000526468 LRP10Q7Z4F1 713 aa15.36■□□□□ 0.05
CAPN1-204ENST00000526468 EPS15P42566 896 aa15.35■□□□□ 0.05
CAPN1-204ENST00000526468 AIMP1Q12904 312 aaKnown RBP15.35■□□□□ 0.05
CAPN1-204ENST00000526468 PDIA6Q15084 440 aa15.35■□□□□ 0.05
CAPN1-204ENST00000526468 HSP90AB3PQ58FF7 597 aa15.35■□□□□ 0.05
CAPN1-204ENST00000526468 DDX21Q9NR30 783 aaKnown RBP eCLIP15.35■□□□□ 0.05
CAPN1-204ENST00000526468 ATP6V0A2Q9Y487 856 aa15.35■□□□□ 0.05
CAPN1-204ENST00000526468 TMPOP42166 694 aaKnown RBP15.34■□□□□ 0.05
CAPN1-204ENST00000526468 GRM1Q13255 1194 aa15.34■□□□□ 0.05
CAPN1-204ENST00000526468 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
CAPN1-204ENST00000526468 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
CAPN1-204ENST00000526468 SUPT20HQ8NEM7 779 aa15.34■□□□□ 0.05
CAPN1-204ENST00000526468 XAGE3Q8WTP9 111 aa15.34■□□□□ 0.05
CAPN1-204ENST00000526468 PRDM10Q9NQV6 1147 aa15.34■□□□□ 0.05
CAPN1-204ENST00000526468 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
CAPN1-204ENST00000526468 HCLS1P14317 486 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-204ENST00000526468 RALBP1Q15311 655 aa15.33■□□□□ 0.04
CAPN1-204ENST00000526468 DPP8Q6V1X1 898 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-204ENST00000526468 USP50Q70EL3 339 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-204ENST00000526468 BABAM1Q9NWV8 329 aa15.33■□□□□ 0.04
CAPN1-204ENST00000526468 SH3TC1Q8TE82 1336 aa15.33■□□□□ 0.04
CAPN1-204ENST00000526468 WDR33Q9C0J8 1336 aaKnown RBP15.33■□□□□ 0.04
CAPN1-204ENST00000526468 CACNA1FO60840 1977 aa15.33■□□□□ 0.04
CAPN1-204ENST00000526468 TRAF5O00463 557 aa15.32■□□□□ 0.04
CAPN1-204ENST00000526468 LBX1P52954 281 aa15.32■□□□□ 0.04
CAPN1-204ENST00000526468 FMR1Q06787 632 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■□□ 15.1
CAPN1-204ENST00000526468 NEUROD2Q15784 382 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms