RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 HACL1Q9UJ83 578 aa26.74■■□□□ 1.87
SNHG6-205ENST00000521399 RIPK4P57078 832 aa26.73■■□□□ 1.87
SNHG6-205ENST00000521399 NTSR2O95665 410 aa26.72■■□□□ 1.87
SNHG6-205ENST00000521399 EAPPQ56P03 285 aaPredicted RBP26.72■■□□□ 1.87
SNHG6-205ENST00000521399 LRP10Q7Z4F1 713 aa26.72■■□□□ 1.87
SNHG6-205ENST00000521399 MKRN1Q9UHC7 482 aaKnown RBP26.72■■□□□ 1.87
SNHG6-205ENST00000521399 EPHX2P34913 555 aa26.71■■□□□ 1.87
SNHG6-205ENST00000521399 PDIA6Q15084 440 aa26.71■■□□□ 1.87
SNHG6-205ENST00000521399 RALBP1Q15311 655 aa26.71■■□□□ 1.87
SNHG6-205ENST00000521399 GPC2Q8N158 579 aa26.71■■□□□ 1.87
SNHG6-205ENST00000521399 JDP2Q8WYK2 163 aa26.71■■□□□ 1.87
SNHG6-205ENST00000521399 BABAM1Q9NWV8 329 aa26.71■■□□□ 1.87
SNHG6-205ENST00000521399 EIF2S2P20042 333 aaKnown RBP26.7■■□□□ 1.86
SNHG6-205ENST00000521399 GRIPAP1Q4V328 841 aa26.7■■□□□ 1.86
SNHG6-205ENST00000521399 PPP1R42Q7Z4L9 355 aa26.7■■□□□ 1.86
SNHG6-205ENST00000521399 RBM17Q96I25 401 aaKnown RBP26.7■■□□□ 1.86
SNHG6-205ENST00000521399 CRAMP1Q96RY5 1269 aa26.7■■□□□ 1.86
SNHG6-205ENST00000521399 RNF123Q5XPI4 1314 aa26.69■■□□□ 1.86
SNHG6-205ENST00000521399 ADAMTSL1Q8N6G6 1762 aa26.69■■□□□ 1.86
SNHG6-205ENST00000521399 ITGBL1O95965 494 aaPredicted RBP26.69■■□□□ 1.86
SNHG6-205ENST00000521399 PARP10Q53GL7 1025 aa26.69■■□□□ 1.86
SNHG6-205ENST00000521399 PNMA8AQ86V59 439 aaPredicted RBP26.69■■□□□ 1.86
SNHG6-205ENST00000521399 TNS4Q8IZW8 715 aa26.69■■□□□ 1.86
SNHG6-205ENST00000521399 TMPOP42166 694 aaKnown RBP26.68■■□□□ 1.86
SNHG6-205ENST00000521399 C3orf67Q6ZVT6 689 aa26.68■■□□□ 1.86
SNHG6-205ENST00000521399 CLEC11AQ9Y240 323 aa26.68■■□□□ 1.86
SNHG6-205ENST00000521399 COL4A5P29400 1685 aa26.67■■□□□ 1.86
SNHG6-205ENST00000521399 PPEF1O14829 653 aaPredicted RBP26.67■■□□□ 1.86
SNHG6-205ENST00000521399 LMOD3Q0VAK6 560 aa26.67■■□□□ 1.86
SNHG6-205ENST00000521399 CNTNAP1P78357 1384 aa26.67■■□□□ 1.86
SNHG6-205ENST00000521399 EIF6P56537 245 aaKnown RBP26.66■■□□□ 1.86
SNHG6-205ENST00000521399 PROSER3Q2NL68 480 aa26.66■■□□□ 1.86
SNHG6-205ENST00000521399 NLRP3Q96P20 1036 aa26.66■■□□□ 1.86
SNHG6-205ENST00000521399 TMEM88BA6NKF7 163 aa26.65■■□□□ 1.86
SNHG6-205ENST00000521399 ANXA1P04083 346 aa26.65■■□□□ 1.86
SNHG6-205ENST00000521399 UTP14AQ9BVJ6 771 aaKnown RBP26.65■■□□□ 1.86
SNHG6-205ENST00000521399 SLC10A5Q5PT55 438 aa26.64■■□□□ 1.86
SNHG6-205ENST00000521399 SLC51AQ86UW1 340 aa26.64■■□□□ 1.86
SNHG6-205ENST00000521399 LARGE2Q8N3Y3 721 aa26.64■■□□□ 1.86
SNHG6-205ENST00000521399 GJA3Q9Y6H8 435 aa26.64■■□□□ 1.86
SNHG6-205ENST00000521399 TCERG1O14776 1098 aaKnown RBP26.63■■□□□ 1.85
SNHG6-205ENST00000521399 CNTROBQ8N137 903 aa26.63■■□□□ 1.85
SNHG6-205ENST00000521399 MAP1SQ66K74 1059 aaPredicted RBP26.62■■□□□ 1.85
SNHG6-205ENST00000521399 COPS6Q7L5N1 327 aa26.61■■□□□ 1.85
SNHG6-205ENST00000521399 HSP90AB3PQ58FF7 597 aa26.6■■□□□ 1.85
SNHG6-205ENST00000521399 NECTIN2Q92692 538 aa26.6■■□□□ 1.85
SNHG6-205ENST00000521399 TMX4Q9H1E5 349 aaPredicted RBP26.6■■□□□ 1.85
SNHG6-205ENST00000521399 ATP6V0A2Q9Y487 856 aa26.6■■□□□ 1.85
SNHG6-205ENST00000521399 ANKRD36CQ5JPF3 1778 aa26.6■■□□□ 1.85
SNHG6-205ENST00000521399 LTBP1Q14766 1721 aa26.59■■□□□ 1.85
SNHG6-205ENST00000521399 CAPN15O75808 1086 aa26.59■■□□□ 1.85
SNHG6-205ENST00000521399 LMOD1P29536 600 aaPredicted RBP26.59■■□□□ 1.85
SNHG6-205ENST00000521399 VEGFBP49765 207 aa26.59■■□□□ 1.85
SNHG6-205ENST00000521399 AIMP1Q12904 312 aaKnown RBP26.59■■□□□ 1.85
SNHG6-205ENST00000521399 CCDC146Q8IYE0 955 aa26.59■■□□□ 1.85
SNHG6-205ENST00000521399 XAGE3Q8WTP9 111 aa26.59■■□□□ 1.85
SNHG6-205ENST00000521399 CHL1O00533 1208 aa26.58■■□□□ 1.85
SNHG6-205ENST00000521399 SCNN1DP51172 638 aa26.58■■□□□ 1.85
SNHG6-205ENST00000521399 NEUROD2Q15784 382 aa26.58■■□□□ 1.85
SNHG6-205ENST00000521399 NIM1KQ8IY84 436 aa26.58■■□□□ 1.85
SNHG6-205ENST00000521399 VPS33BQ9H267 617 aa26.58■■□□□ 1.85
SNHG6-205ENST00000521399 ABCC4O15439 1325 aa26.58■■□□□ 1.85
SNHG6-205ENST00000521399 MYBBP1AQ9BQG0 1328 aaKnown RBP26.58■■□□□ 1.85
SNHG6-205ENST00000521399 PPIP5K2O43314 1243 aa26.57■■□□□ 1.84
SNHG6-205ENST00000521399 EPS15P42566 896 aa26.57■■□□□ 1.84
SNHG6-205ENST00000521399 NLRP10Q86W26 655 aa26.57■■□□□ 1.84
SNHG6-205ENST00000521399 DDX21Q9NR30 783 aaKnown RBP eCLIP26.57■■□□□ 1.84
SNHG6-205ENST00000521399 LAMB2P55268 1798 aa26.56■■□□□ 1.84
SNHG6-205ENST00000521399 DDX10Q13206 875 aaKnown RBP26.56■■□□□ 1.84
SNHG6-205ENST00000521399 TCIRG1Q13488 830 aa26.56■■□□□ 1.84
SNHG6-205ENST00000521399 KRT24Q2M2I5 525 aa26.56■■□□□ 1.84
SNHG6-205ENST00000521399 FOXN1O15353 648 aa26.55■■□□□ 1.84
SNHG6-205ENST00000521399 HCLS1P14317 486 aaPredicted RBP26.55■■□□□ 1.84
SNHG6-205ENST00000521399 AOC3Q16853 763 aa26.55■■□□□ 1.84
SNHG6-205ENST00000521399 RASSF10A6NK89 507 aa26.54■■□□□ 1.84
SNHG6-205ENST00000521399 BBOX1O75936 387 aa26.54■■□□□ 1.84
SNHG6-205ENST00000521399 SUPT20HQ8NEM7 779 aa26.54■■□□□ 1.84
SNHG6-205ENST00000521399 RUNDC1Q96C34 613 aa26.54■■□□□ 1.84
SNHG6-205ENST00000521399 RTFDC1Q9BY42 306 aaPredicted RBP26.54■■□□□ 1.84
SNHG6-205ENST00000521399 TRMT112Q9UI30 125 aaKnown RBP26.54■■□□□ 1.84
SNHG6-205ENST00000521399 TRIM35Q9UPQ4 493 aa26.54■■□□□ 1.84
SNHG6-205ENST00000521399 DEFB115Q30KQ5 88 aa26.53■■□□□ 1.84
SNHG6-205ENST00000521399 USP50Q70EL3 339 aaPredicted RBP26.53■■□□□ 1.84
SNHG6-205ENST00000521399 SP8Q8IXZ3 490 aa26.53■■□□□ 1.84
SNHG6-205ENST00000521399 LAS1LQ9Y4W2 734 aaKnown RBP26.53■■□□□ 1.84
SNHG6-205ENST00000521399 SH3TC1Q8TE82 1336 aa26.52■■□□□ 1.84
SNHG6-205ENST00000521399 CHPF2Q9P2E5 772 aa26.52■■□□□ 1.84
SNHG6-205ENST00000521399 WDR43Q15061 677 aaKnown RBP eCLIP26.51■■□□□ 1.83
SNHG6-205ENST00000521399 DPP8Q6V1X1 898 aaPredicted RBP26.51■■□□□ 1.83
SNHG6-205ENST00000521399 ZNRF3Q9ULT6 936 aa26.51■■□□□ 1.83
SNHG6-205ENST00000521399 CXCL9Q07325 125 aa26.5■■□□□ 1.83
SNHG6-205ENST00000521399 DDX46Q7L014 1031 aaKnown RBP26.5■■□□□ 1.83
SNHG6-205ENST00000521399 MPNDQ8N594 471 aa26.5■■□□□ 1.83
SNHG6-205ENST00000521399 AIDAQ96BJ3 306 aa26.5■■□□□ 1.83
SNHG6-205ENST00000521399 HOXB7P09629 217 aa26.49■■□□□ 1.83
SNHG6-205ENST00000521399 GRAPQ13588 217 aa26.49■■□□□ 1.83
SNHG6-205ENST00000521399 HDGFL1Q5TGJ6 251 aa26.49■■□□□ 1.83
SNHG6-205ENST00000521399 GRAPLQ8TC17 118 aaPredicted RBP26.49■■□□□ 1.83
SNHG6-205ENST00000521399 PRDM10Q9NQV6 1147 aa26.49■■□□□ 1.83
SNHG6-205ENST00000521399 WBP1LQ9NX94 342 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms