RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TMEM121BQ9BXQ6 578 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-216ENST00000519489 GLIS2Q9BZE0 524 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-216ENST00000519489 CENPFP49454 3210 aa9.91□□□□□ -0.82
CTNNA1-216ENST00000519489 MON2Q7Z3U7 1717 aa9.9□□□□□ -0.82
CTNNA1-216ENST00000519489 G3V3G9 751 aa9.9□□□□□ -0.82
CTNNA1-216ENST00000519489 H0YGN5 161 aa9.9□□□□□ -0.82
CTNNA1-216ENST00000519489 SCNN1DP51172 638 aa9.9□□□□□ -0.82
CTNNA1-216ENST00000519489 RBM27Q9P2N5 1060 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-216ENST00000519489 TAOK2Q9UL54 1235 aa9.9□□□□□ -0.82
CTNNA1-216ENST00000519489 COL5A3P25940 1745 aaPredicted RBP9.9□□□□□ -0.83
CTNNA1-216ENST00000519489 AFDNP55196 1824 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-216ENST00000519489 SCN11AQ9UI33 1791 aa9.89□□□□□ -0.83
CTNNA1-216ENST00000519489 SOX1O00570 391 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-216ENST00000519489 BICDL1Q6ZP65 573 aa9.89□□□□□ -0.83
CTNNA1-216ENST00000519489 CSRNP1Q96S65 589 aa9.89□□□□□ -0.83
CTNNA1-216ENST00000519489 COL4A5P29400 1685 aa9.89□□□□□ -0.83
CTNNA1-216ENST00000519489 EVC2Q86UK5 1308 aa9.88□□□□□ -0.83
CTNNA1-216ENST00000519489 AMPHP49418 695 aa9.88□□□□□ -0.83
CTNNA1-216ENST00000519489 RRS1Q15050 365 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-216ENST00000519489 AKAP4Q5JQC9 854 aa9.88□□□□□ -0.83
CTNNA1-216ENST00000519489 PRPF40BQ6NWY9 871 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-216ENST00000519489 PRDM6Q9NQX0 595 aa9.88□□□□□ -0.83
CTNNA1-216ENST00000519489 COL11A2P13942 1736 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-216ENST00000519489 EN2P19622 333 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-216ENST00000519489 GPC2Q8N158 579 aa9.87□□□□□ -0.83
CTNNA1-216ENST00000519489 ZNF296Q8WUU4 475 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-216ENST00000519489 SLX4Q8IY92 1834 aa9.86□□□□□ -0.83
CTNNA1-216ENST00000519489 HSP90AB2PQ58FF8 381 aa9.86□□□□□ -0.83
CTNNA1-216ENST00000519489 PRO3102Q9H379 93 aa9.86□□□□□ -0.83
CTNNA1-216ENST00000519489 ZNF408Q9H9D4 720 aa9.86□□□□□ -0.83
CTNNA1-216ENST00000519489 PHKG2P15735 406 aa9.85□□□□□ -0.83
CTNNA1-216ENST00000519489 HUNKP57058 714 aa9.85□□□□□ -0.83
CTNNA1-216ENST00000519489 PKN2Q16513 984 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-216ENST00000519489 FBXO46Q6PJ61 603 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-216ENST00000519489 LRCH3Q96II8 777 aa9.85□□□□□ -0.83
CTNNA1-216ENST00000519489 STAC3Q96MF2 364 aa9.85□□□□□ -0.83
CTNNA1-216ENST00000519489 GJA3Q9Y6H8 435 aa9.85□□□□□ -0.83
CTNNA1-216ENST00000519489 ANKRD31Q8N7Z5 1873 aa9.85□□□□□ -0.83
CTNNA1-216ENST00000519489 TRPM7Q96QT4 1865 aa9.85□□□□□ -0.83
CTNNA1-216ENST00000519489 SOS1Q07889 1333 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-216ENST00000519489 ZNF831Q5JPB2 1677 aa9.84□□□□□ -0.83
CTNNA1-216ENST00000519489 PTCD1O75127 700 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-216ENST00000519489 ECM2O94769 699 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-216ENST00000519489 FKBP4Q02790 459 aaKnown RBP eCLIP9.84□□□□□ -0.83
CTNNA1-216ENST00000519489 PRR5LQ6MZQ0 368 aa9.84□□□□□ -0.83
CTNNA1-216ENST00000519489 USP50Q70EL3 339 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-216ENST00000519489 SLC51AQ86UW1 340 aa9.84□□□□□ -0.83
CTNNA1-216ENST00000519489 SLC12A5Q9H2X9 1139 aa9.84□□□□□ -0.83
CTNNA1-216ENST00000519489 MUC3AQ02505 3323 aa9.84□□□□□ -0.83
CTNNA1-216ENST00000519489 ZPR1O75312 459 aa9.83□□□□□ -0.84
CTNNA1-216ENST00000519489 COL9A1P20849 921 aa9.83□□□□□ -0.84
CTNNA1-216ENST00000519489 HIRAP54198 1017 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-216ENST00000519489 BRIP1Q9BX63 1249 aa9.83□□□□□ -0.84
CTNNA1-216ENST00000519489 PGAP2Q9UHJ9 254 aa9.83□□□□□ -0.84
CTNNA1-216ENST00000519489 NARFQ9UHQ1 456 aa9.83□□□□□ -0.84
CTNNA1-216ENST00000519489 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-216ENST00000519489 TBC1D8O95759 1140 aa9.82□□□□□ -0.84
CTNNA1-216ENST00000519489 SRGNP10124 158 aa9.82□□□□□ -0.84
CTNNA1-216ENST00000519489 RGMBQ6NW40 437 aa9.82□□□□□ -0.84
CTNNA1-216ENST00000519489 CDAN1Q8IWY9 1227 aa9.82□□□□□ -0.84
CTNNA1-216ENST00000519489 R3HDMLQ9H3Y0 253 aa9.82□□□□□ -0.84
CTNNA1-216ENST00000519489 NCAPD2Q15021 1401 aa9.82□□□□□ -0.84
CTNNA1-216ENST00000519489 SNED1Q8TER0 1413 aa9.82□□□□□ -0.84
CTNNA1-216ENST00000519489 TTC28Q96AY4 2481 aa9.81□□□□□ -0.84
CTNNA1-216ENST00000519489 CACNA1SQ13698 1873 aa9.81□□□□□ -0.84
CTNNA1-216ENST00000519489 KIAA0100Q14667 2235 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-216ENST00000519489 IARSP41252 1262 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-216ENST00000519489 STYK1Q6J9G0 422 aa9.81□□□□□ -0.84
CTNNA1-216ENST00000519489 MS4A4AQ96JQ5 239 aa9.81□□□□□ -0.84
CTNNA1-216ENST00000519489 ERBB4Q15303 1308 aa9.81□□□□□ -0.84
CTNNA1-216ENST00000519489 A0A1W2PP64 1363 aa9.8□□□□□ -0.84
CTNNA1-216ENST00000519489 RTL1A6NKG5 1358 aa9.8□□□□□ -0.84
CTNNA1-216ENST00000519489 PDE6BP35913 854 aa9.8□□□□□ -0.84
CTNNA1-216ENST00000519489 CCDC93Q567U6 631 aa9.8□□□□□ -0.84
CTNNA1-216ENST00000519489 TBC1D9BQ66K14 1250 aa9.8□□□□□ -0.84
CTNNA1-216ENST00000519489 DNAJC10Q8IXB1 793 aa9.8□□□□□ -0.84
CTNNA1-216ENST00000519489 CNKSR1Q969H4 720 aa9.8□□□□□ -0.84
CTNNA1-216ENST00000519489 HDAC9Q9UKV0 1011 aa9.8□□□□□ -0.84
CTNNA1-216ENST00000519489 SLC10A3P09131 477 aa9.79□□□□□ -0.84
CTNNA1-216ENST00000519489 MICALL2Q8IY33 904 aa9.79□□□□□ -0.84
CTNNA1-216ENST00000519489 SPG7Q9UQ90 795 aa9.79□□□□□ -0.84
CTNNA1-216ENST00000519489 TJP1Q07157 1748 aa9.79□□□□□ -0.84
CTNNA1-216ENST00000519489 PAPPA2Q9BXP8 1791 aa9.78□□□□□ -0.84
CTNNA1-216ENST00000519489 SHTN1A0MZ66 631 aa9.78□□□□□ -0.84
CTNNA1-216ENST00000519489 LMOD1P29536 600 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-216ENST00000519489 SOGA3Q5TF21 947 aa9.78□□□□□ -0.84
CTNNA1-216ENST00000519489 USP48Q86UV5 1035 aa9.78□□□□□ -0.84
CTNNA1-216ENST00000519489 IFNL2Q8IZJ0 200 aa9.78□□□□□ -0.84
CTNNA1-216ENST00000519489 TRPM4Q8TD43 1214 aa9.78□□□□□ -0.84
CTNNA1-216ENST00000519489 ZBTB1Q9Y2K1 713 aa9.78□□□□□ -0.84
CTNNA1-216ENST00000519489 ERVV-2B6SEH9 535 aa9.77□□□□□ -0.85
CTNNA1-216ENST00000519489 GPR25O00155 361 aa9.77□□□□□ -0.85
CTNNA1-216ENST00000519489 PLA2G5P39877 138 aa9.77□□□□□ -0.85
CTNNA1-216ENST00000519489 ZNF157P51786 506 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-216ENST00000519489 Q7L0L9 218 aa9.77□□□□□ -0.85
CTNNA1-216ENST00000519489 MASTLQ96GX5 879 aa9.77□□□□□ -0.85
CTNNA1-216ENST00000519489 ADARB2Q9NS39 739 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-216ENST00000519489 GPRC5DQ9NZD1 345 aa9.77□□□□□ -0.85
CTNNA1-216ENST00000519489 STK24Q9Y6E0 443 aa9.77□□□□□ -0.85
CTNNA1-216ENST00000519489 COL15A1P39059 1388 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms