RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 SUSD4Q5VX71 490 aa24.26■■□□□ 1.47
SPOP-220ENST00000515508 GIGYF2Q6Y7W6 1299 aaKnown RBP24.26■■□□□ 1.47
SPOP-220ENST00000515508 CNTNAP1P78357 1384 aa24.26■■□□□ 1.47
SPOP-220ENST00000515508 ANKRD36CQ5JPF3 1778 aa24.26■■□□□ 1.47
SPOP-220ENST00000515508 LRP10Q7Z4F1 713 aa24.25■■□□□ 1.47
SPOP-220ENST00000515508 TNS4Q8IZW8 715 aa24.25■■□□□ 1.47
SPOP-220ENST00000515508 GPC2Q8N158 579 aa24.25■■□□□ 1.47
SPOP-220ENST00000515508 RPGRQ92834 1020 aaKnown RBP24.25■■□□□ 1.47
SPOP-220ENST00000515508 MKRN1Q9UHC7 482 aaKnown RBP24.25■■□□□ 1.47
SPOP-220ENST00000515508 ITGBL1O95965 494 aaPredicted RBP24.24■■□□□ 1.47
SPOP-220ENST00000515508 EPHX2P34913 555 aa24.24■■□□□ 1.47
SPOP-220ENST00000515508 TSPYL4Q9UJ04 414 aa24.24■■□□□ 1.47
SPOP-220ENST00000515508 RNF123Q5XPI4 1314 aa24.24■■□□□ 1.47
SPOP-220ENST00000515508 GRIPAP1Q4V328 841 aa24.23■■□□□ 1.47
SPOP-220ENST00000515508 EAPPQ56P03 285 aaPredicted RBP24.23■■□□□ 1.47
SPOP-220ENST00000515508 JDP2Q8WYK2 163 aa24.23■■□□□ 1.47
SPOP-220ENST00000515508 CRAMP1Q96RY5 1269 aa24.23■■□□□ 1.47
SPOP-220ENST00000515508 LTBP1Q14766 1721 aa24.23■■□□□ 1.47
SPOP-220ENST00000515508 PDIA6Q15084 440 aa24.22■■□□□ 1.47
SPOP-220ENST00000515508 PARP10Q53GL7 1025 aa24.22■■□□□ 1.47
SPOP-220ENST00000515508 PNMA8AQ86V59 439 aaPredicted RBP24.22■■□□□ 1.47
SPOP-220ENST00000515508 BABAM1Q9NWV8 329 aa24.22■■□□□ 1.47
SPOP-220ENST00000515508 LAMB2P55268 1798 aa24.21■■□□□ 1.47
SPOP-220ENST00000515508 TMEM88BA6NKF7 163 aa24.2■■□□□ 1.46
SPOP-220ENST00000515508 PPEF1O14829 653 aaPredicted RBP24.2■■□□□ 1.46
SPOP-220ENST00000515508 PPP1R42Q7Z4L9 355 aa24.2■■□□□ 1.46
SPOP-220ENST00000515508 RBM17Q96I25 401 aaKnown RBP24.2■■□□□ 1.46
SPOP-220ENST00000515508 RIPK4P57078 832 aa24.19■■□□□ 1.46
SPOP-220ENST00000515508 RALBP1Q15311 655 aa24.19■■□□□ 1.46
SPOP-220ENST00000515508 C3orf67Q6ZVT6 689 aa24.19■■□□□ 1.46
SPOP-220ENST00000515508 EIF6P56537 245 aaKnown RBP24.18■■□□□ 1.46
SPOP-220ENST00000515508 SLC51AQ86UW1 340 aa24.18■■□□□ 1.46
SPOP-220ENST00000515508 LMOD3Q0VAK6 560 aa24.17■■□□□ 1.46
SPOP-220ENST00000515508 PROSER3Q2NL68 480 aa24.17■■□□□ 1.46
SPOP-220ENST00000515508 CLEC11AQ9Y240 323 aa24.17■■□□□ 1.46
SPOP-220ENST00000515508 EIF2S2P20042 333 aaKnown RBP24.16■■□□□ 1.46
SPOP-220ENST00000515508 TMPOP42166 694 aaKnown RBP24.16■■□□□ 1.46
SPOP-220ENST00000515508 SLC10A5Q5PT55 438 aa24.16■■□□□ 1.46
SPOP-220ENST00000515508 CNTROBQ8N137 903 aa24.16■■□□□ 1.46
SPOP-220ENST00000515508 LARGE2Q8N3Y3 721 aa24.16■■□□□ 1.46
SPOP-220ENST00000515508 NLRP3Q96P20 1036 aa24.16■■□□□ 1.46
SPOP-220ENST00000515508 MAP1SQ66K74 1059 aaPredicted RBP24.15■■□□□ 1.46
SPOP-220ENST00000515508 UTP14AQ9BVJ6 771 aaKnown RBP24.15■■□□□ 1.46
SPOP-220ENST00000515508 ANXA1P04083 346 aa24.14■■□□□ 1.45
SPOP-220ENST00000515508 VEGFBP49765 207 aa24.14■■□□□ 1.45
SPOP-220ENST00000515508 SCNN1DP51172 638 aa24.14■■□□□ 1.45
SPOP-220ENST00000515508 GJA3Q9Y6H8 435 aa24.14■■□□□ 1.45
SPOP-220ENST00000515508 RASSF10A6NK89 507 aa24.13■■□□□ 1.45
SPOP-220ENST00000515508 CAPN15O75808 1086 aa24.13■■□□□ 1.45
SPOP-220ENST00000515508 ATP6V0A2Q9Y487 856 aa24.13■■□□□ 1.45
SPOP-220ENST00000515508 ABCC4O15439 1325 aa24.12■■□□□ 1.45
SPOP-220ENST00000515508 LMOD1P29536 600 aaPredicted RBP24.12■■□□□ 1.45
SPOP-220ENST00000515508 HSP90AB3PQ58FF7 597 aa24.12■■□□□ 1.45
SPOP-220ENST00000515508 VPS33BQ9H267 617 aa24.12■■□□□ 1.45
SPOP-220ENST00000515508 THSD7BQ9C0I4 1608 aa24.11■■□□□ 1.45
SPOP-220ENST00000515508 TCERG1O14776 1098 aaKnown RBP24.11■■□□□ 1.45
SPOP-220ENST00000515508 FOXN1O15353 648 aa24.11■■□□□ 1.45
SPOP-220ENST00000515508 NIM1KQ8IY84 436 aa24.11■■□□□ 1.45
SPOP-220ENST00000515508 LRRC37AA6NMS7 1700 aa24.1■■□□□ 1.45
SPOP-220ENST00000515508 PPIP5K2O43314 1243 aa24.1■■□□□ 1.45
SPOP-220ENST00000515508 COPS6Q7L5N1 327 aa24.1■■□□□ 1.45
SPOP-220ENST00000515508 NLRP10Q86W26 655 aa24.1■■□□□ 1.45
SPOP-220ENST00000515508 RTFDC1Q9BY42 306 aaPredicted RBP24.1■■□□□ 1.45
SPOP-220ENST00000515508 DDX60Q8IY21 1712 aaKnown RBP24.1■■□□□ 1.45
SPOP-220ENST00000515508 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
SPOP-220ENST00000515508 TRPM7Q96QT4 1865 aa24.09■■□□□ 1.45
SPOP-220ENST00000515508 EPS15P42566 896 aa24.09■■□□□ 1.45
SPOP-220ENST00000515508 AOC3Q16853 763 aa24.09■■□□□ 1.45
SPOP-220ENST00000515508 XAGE3Q8WTP9 111 aa24.09■■□□□ 1.45
SPOP-220ENST00000515508 TMX4Q9H1E5 349 aaPredicted RBP24.09■■□□□ 1.45
SPOP-220ENST00000515508 DDX21Q9NR30 783 aaKnown RBP eCLIP24.09■■□□□ 1.45
SPOP-220ENST00000515508 CHL1O00533 1208 aa24.08■■□□□ 1.45
SPOP-220ENST00000515508 USP50Q70EL3 339 aaPredicted RBP24.08■■□□□ 1.45
SPOP-220ENST00000515508 NECTIN2Q92692 538 aa24.08■■□□□ 1.45
SPOP-220ENST00000515508 PRDM10Q9NQV6 1147 aa24.08■■□□□ 1.45
SPOP-220ENST00000515508 AIMP1Q12904 312 aaKnown RBP24.07■■□□□ 1.44
SPOP-220ENST00000515508 TCIRG1Q13488 830 aa24.07■■□□□ 1.44
SPOP-220ENST00000515508 SUPT20HQ8NEM7 779 aa24.07■■□□□ 1.44
SPOP-220ENST00000515508 DUOX1Q9NRD9 1551 aa24.07■■□□□ 1.44
SPOP-220ENST00000515508 BBOX1O75936 387 aa24.06■■□□□ 1.44
SPOP-220ENST00000515508 KRT24Q2M2I5 525 aa24.06■■□□□ 1.44
SPOP-220ENST00000515508 DEFB115Q30KQ5 88 aa24.06■■□□□ 1.44
SPOP-220ENST00000515508 SP8Q8IXZ3 490 aa24.06■■□□□ 1.44
SPOP-220ENST00000515508 CCDC146Q8IYE0 955 aa24.06■■□□□ 1.44
SPOP-220ENST00000515508 AIDAQ96BJ3 306 aa24.06■■□□□ 1.44
SPOP-220ENST00000515508 WBP1LQ9NX94 342 aa24.06■■□□□ 1.44
SPOP-220ENST00000515508 TAF1P21675 1872 aa24.06■■□□□ 1.44
SPOP-220ENST00000515508 SH3TC1Q8TE82 1336 aa24.06■■□□□ 1.44
SPOP-220ENST00000515508 HCLS1P14317 486 aaPredicted RBP24.05■■□□□ 1.44
SPOP-220ENST00000515508 CTCFP49711 727 aaPredicted RBP24.05■■□□□ 1.44
SPOP-220ENST00000515508 GPRC5DQ9NZD1 345 aa24.05■■□□□ 1.44
SPOP-220ENST00000515508 TRMT112Q9UI30 125 aaKnown RBP24.05■■□□□ 1.44
SPOP-220ENST00000515508 TRIM35Q9UPQ4 493 aa24.05■■□□□ 1.44
SPOP-220ENST00000515508 HOXB7P09629 217 aa24.04■■□□□ 1.44
SPOP-220ENST00000515508 NEUROD2Q15784 382 aa24.04■■□□□ 1.44
SPOP-220ENST00000515508 DPP8Q6V1X1 898 aaPredicted RBP24.04■■□□□ 1.44
SPOP-220ENST00000515508 RUNDC1Q96C34 613 aa24.04■■□□□ 1.44
SPOP-220ENST00000515508 CHPF2Q9P2E5 772 aa24.04■■□□□ 1.44
SPOP-220ENST00000515508 ZNRF3Q9ULT6 936 aa24.04■■□□□ 1.44
SPOP-220ENST00000515508 CXCL9Q07325 125 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms