RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 GPC2Q8N158 579 aa19.83■□□□□ 0.77
DDR1-278ENST00000515233 ZBTB3Q9H5J0 574 aa19.83■□□□□ 0.77
DDR1-278ENST00000515233 MKRN1Q9UHC7 482 aaKnown RBP19.83■□□□□ 0.77
DDR1-278ENST00000515233 MAPK8IP3Q9UPT6 1336 aa19.82■□□□□ 0.76
DDR1-278ENST00000515233 EPHX2P34913 555 aa19.82■□□□□ 0.76
DDR1-278ENST00000515233 JDP2Q8WYK2 163 aa19.82■□□□□ 0.76
DDR1-278ENST00000515233 RPGRQ92834 1020 aaKnown RBP19.82■□□□□ 0.76
DDR1-278ENST00000515233 ADAMTSL1Q8N6G6 1762 aa19.81■□□□□ 0.76
DDR1-278ENST00000515233 GPTP24298 496 aa19.81■□□□□ 0.76
DDR1-278ENST00000515233 EAPPQ56P03 285 aaPredicted RBP19.81■□□□□ 0.76
DDR1-278ENST00000515233 CRAMP1Q96RY5 1269 aa19.81■□□□□ 0.76
DDR1-278ENST00000515233 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
DDR1-278ENST00000515233 CNTNAP1P78357 1384 aa19.81■□□□□ 0.76
DDR1-278ENST00000515233 TMEM88BA6NKF7 163 aa19.8■□□□□ 0.76
DDR1-278ENST00000515233 NTSR2O95665 410 aa19.8■□□□□ 0.76
DDR1-278ENST00000515233 LRP10Q7Z4F1 713 aa19.8■□□□□ 0.76
DDR1-278ENST00000515233 PPP1R42Q7Z4L9 355 aa19.8■□□□□ 0.76
DDR1-278ENST00000515233 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
DDR1-278ENST00000515233 PDIA6Q15084 440 aa19.79■□□□□ 0.76
DDR1-278ENST00000515233 PARP10Q53GL7 1025 aa19.79■□□□□ 0.76
DDR1-278ENST00000515233 RBM17Q96I25 401 aaKnown RBP19.79■□□□□ 0.76
DDR1-278ENST00000515233 TSPYL4Q9UJ04 414 aa19.79■□□□□ 0.76
DDR1-278ENST00000515233 CLEC11AQ9Y240 323 aa19.79■□□□□ 0.76
DDR1-278ENST00000515233 RIPK4P57078 832 aa19.78■□□□□ 0.76
DDR1-278ENST00000515233 SLC10A5Q5PT55 438 aa19.78■□□□□ 0.76
DDR1-278ENST00000515233 EIF6P56537 245 aaKnown RBP19.77■□□□□ 0.76
DDR1-278ENST00000515233 CNTROBQ8N137 903 aa19.77■□□□□ 0.76
DDR1-278ENST00000515233 NLRP3Q96P20 1036 aa19.77■□□□□ 0.76
DDR1-278ENST00000515233 RALBP1Q15311 655 aa19.76■□□□□ 0.75
DDR1-278ENST00000515233 VPS33BQ9H267 617 aa19.76■□□□□ 0.75
DDR1-278ENST00000515233 COL4A5P29400 1685 aa19.75■□□□□ 0.75
DDR1-278ENST00000515233 PPEF1O14829 653 aaPredicted RBP19.75■□□□□ 0.75
DDR1-278ENST00000515233 EIF2S2P20042 333 aaKnown RBP19.75■□□□□ 0.75
DDR1-278ENST00000515233 MAP1SQ66K74 1059 aaPredicted RBP19.75■□□□□ 0.75
DDR1-278ENST00000515233 C3orf67Q6ZVT6 689 aa19.75■□□□□ 0.75
DDR1-278ENST00000515233 LARGE2Q8N3Y3 721 aa19.75■□□□□ 0.75
DDR1-278ENST00000515233 TMPOP42166 694 aaKnown RBP19.74■□□□□ 0.75
DDR1-278ENST00000515233 VEGFBP49765 207 aa19.74■□□□□ 0.75
DDR1-278ENST00000515233 LMOD3Q0VAK6 560 aa19.74■□□□□ 0.75
DDR1-278ENST00000515233 UTP14AQ9BVJ6 771 aaKnown RBP19.74■□□□□ 0.75
DDR1-278ENST00000515233 GJA3Q9Y6H8 435 aa19.74■□□□□ 0.75
DDR1-278ENST00000515233 ATP6V0A2Q9Y487 856 aa19.73■□□□□ 0.75
DDR1-278ENST00000515233 RASSF10A6NK89 507 aa19.72■□□□□ 0.75
DDR1-278ENST00000515233 TCERG1O14776 1098 aaKnown RBP19.72■□□□□ 0.75
DDR1-278ENST00000515233 FOXN1O15353 648 aa19.72■□□□□ 0.75
DDR1-278ENST00000515233 CAPN15O75808 1086 aa19.72■□□□□ 0.75
DDR1-278ENST00000515233 LMOD1P29536 600 aaPredicted RBP19.72■□□□□ 0.75
DDR1-278ENST00000515233 SCNN1DP51172 638 aa19.72■□□□□ 0.75
DDR1-278ENST00000515233 PROSER3Q2NL68 480 aa19.72■□□□□ 0.75
DDR1-278ENST00000515233 DEFB115Q30KQ5 88 aa19.72■□□□□ 0.75
DDR1-278ENST00000515233 HSP90AB3PQ58FF7 597 aa19.72■□□□□ 0.75
DDR1-278ENST00000515233 TMX4Q9H1E5 349 aaPredicted RBP19.72■□□□□ 0.75
DDR1-278ENST00000515233 ANXA1P04083 346 aa19.71■□□□□ 0.75
DDR1-278ENST00000515233 EPS15P42566 896 aa19.71■□□□□ 0.75
DDR1-278ENST00000515233 USP50Q70EL3 339 aaPredicted RBP19.71■□□□□ 0.75
DDR1-278ENST00000515233 COPS6Q7L5N1 327 aa19.71■□□□□ 0.75
DDR1-278ENST00000515233 PRDM10Q9NQV6 1147 aa19.71■□□□□ 0.75
DDR1-278ENST00000515233 LTBP1Q14766 1721 aa19.71■□□□□ 0.75
DDR1-278ENST00000515233 BBOX1O75936 387 aa19.7■□□□□ 0.74
DDR1-278ENST00000515233 SLC51AQ86UW1 340 aa19.7■□□□□ 0.74
DDR1-278ENST00000515233 NIM1KQ8IY84 436 aa19.7■□□□□ 0.74
DDR1-278ENST00000515233 RTFDC1Q9BY42 306 aaPredicted RBP19.7■□□□□ 0.74
DDR1-278ENST00000515233 DDX21Q9NR30 783 aaKnown RBP eCLIP19.7■□□□□ 0.74
DDR1-278ENST00000515233 WBP1LQ9NX94 342 aa19.7■□□□□ 0.74
DDR1-278ENST00000515233 ABCC4O15439 1325 aa19.7■□□□□ 0.74
DDR1-278ENST00000515233 PPIP5K2O43314 1243 aa19.69■□□□□ 0.74
DDR1-278ENST00000515233 TCIRG1Q13488 830 aa19.69■□□□□ 0.74
DDR1-278ENST00000515233 NLRP10Q86W26 655 aa19.69■□□□□ 0.74
DDR1-278ENST00000515233 SP8Q8IXZ3 490 aa19.69■□□□□ 0.74
DDR1-278ENST00000515233 SUPT20HQ8NEM7 779 aa19.69■□□□□ 0.74
DDR1-278ENST00000515233 ANKRD36CQ5JPF3 1778 aa19.68■□□□□ 0.74
DDR1-278ENST00000515233 CHL1O00533 1208 aa19.68■□□□□ 0.74
DDR1-278ENST00000515233 CTCFP49711 727 aaPredicted RBP19.68■□□□□ 0.74
DDR1-278ENST00000515233 XAGE3Q8WTP9 111 aa19.68■□□□□ 0.74
DDR1-278ENST00000515233 AIMP1Q12904 312 aaKnown RBP19.67■□□□□ 0.74
DDR1-278ENST00000515233 AOC3Q16853 763 aa19.67■□□□□ 0.74
DDR1-278ENST00000515233 AIDAQ96BJ3 306 aa19.67■□□□□ 0.74
DDR1-278ENST00000515233 ZNRF3Q9ULT6 936 aa19.67■□□□□ 0.74
DDR1-278ENST00000515233 LAMB2P55268 1798 aa19.66■□□□□ 0.74
DDR1-278ENST00000515233 CXCL9Q07325 125 aa19.66■□□□□ 0.74
DDR1-278ENST00000515233 NECTIN2Q92692 538 aa19.66■□□□□ 0.74
DDR1-278ENST00000515233 GPRC5DQ9NZD1 345 aa19.66■□□□□ 0.74
DDR1-278ENST00000515233 TRMT112Q9UI30 125 aaKnown RBP19.66■□□□□ 0.74
DDR1-278ENST00000515233 WDR33Q9C0J8 1336 aaKnown RBP19.66■□□□□ 0.74
DDR1-278ENST00000515233 HCLS1P14317 486 aaPredicted RBP19.65■□□□□ 0.74
DDR1-278ENST00000515233 DPP8Q6V1X1 898 aaPredicted RBP19.65■□□□□ 0.74
DDR1-278ENST00000515233 MPNDQ8N594 471 aa19.65■□□□□ 0.74
DDR1-278ENST00000515233 ADARB2Q9NS39 739 aaKnown RBP19.65■□□□□ 0.74
DDR1-278ENST00000515233 ABT1Q9ULW3 272 aaKnown RBP19.65■□□□□ 0.74
DDR1-278ENST00000515233 TRIM35Q9UPQ4 493 aa19.65■□□□□ 0.74
DDR1-278ENST00000515233 SH3TC1Q8TE82 1336 aa19.65■□□□□ 0.74
DDR1-278ENST00000515233 MAP2K1Q02750 393 aaPredicted RBP19.64■□□□□ 0.73
DDR1-278ENST00000515233 KIAA2012Q0VF49 1180 aa19.64■□□□□ 0.73
DDR1-278ENST00000515233 GRAPQ13588 217 aa19.64■□□□□ 0.73
DDR1-278ENST00000515233 NEUROD2Q15784 382 aa19.64■□□□□ 0.73
DDR1-278ENST00000515233 DDX46Q7L014 1031 aaKnown RBP19.64■□□□□ 0.73
DDR1-278ENST00000515233 GRAPLQ8TC17 118 aaPredicted RBP19.64■□□□□ 0.73
DDR1-278ENST00000515233 RUNDC1Q96C34 613 aa19.64■□□□□ 0.73
DDR1-278ENST00000515233 MYBBP1AQ9BQG0 1328 aaKnown RBP19.64■□□□□ 0.73
DDR1-278ENST00000515233 HOXB7P09629 217 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms