RNA–Protein interactions for RNA: ENST00000513496.5

FBXO4-207, Transcript of F-box protein 4, humanhuman

TSL 3

Gene FBXO4, Length 719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-207ENST00000513496 SUSD4Q5VX71 490 aa18.3■□□□□ 0.52
FBXO4-207ENST00000513496 GIGYF2Q6Y7W6 1299 aaKnown RBP18.3■□□□□ 0.52
FBXO4-207ENST00000513496 LRP10Q7Z4F1 713 aa18.3■□□□□ 0.52
FBXO4-207ENST00000513496 TNS4Q8IZW8 715 aa18.3■□□□□ 0.52
FBXO4-207ENST00000513496 ZBTB3Q9H5J0 574 aa18.3■□□□□ 0.52
FBXO4-207ENST00000513496 COL4A5P29400 1685 aa18.3■□□□□ 0.52
FBXO4-207ENST00000513496 CNTNAP1P78357 1384 aa18.3■□□□□ 0.52
FBXO4-207ENST00000513496 NTSR2O95665 410 aa18.29■□□□□ 0.52
FBXO4-207ENST00000513496 EPHX2P34913 555 aa18.29■□□□□ 0.52
FBXO4-207ENST00000513496 GPC2Q8N158 579 aa18.29■□□□□ 0.52
FBXO4-207ENST00000513496 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
FBXO4-207ENST00000513496 MKRN1Q9UHC7 482 aaKnown RBP18.29■□□□□ 0.52
FBXO4-207ENST00000513496 LAMB2P55268 1798 aa18.28■□□□□ 0.52
FBXO4-207ENST00000513496 PNMA8AQ86V59 439 aaPredicted RBP18.28■□□□□ 0.52
FBXO4-207ENST00000513496 RPGRQ92834 1020 aaKnown RBP18.28■□□□□ 0.52
FBXO4-207ENST00000513496 BABAM1Q9NWV8 329 aa18.28■□□□□ 0.52
FBXO4-207ENST00000513496 LTBP1Q14766 1721 aa18.28■□□□□ 0.52
FBXO4-207ENST00000513496 RNF123Q5XPI4 1314 aa18.27■□□□□ 0.52
FBXO4-207ENST00000513496 PDIA6Q15084 440 aa18.27■□□□□ 0.52
FBXO4-207ENST00000513496 PARP10Q53GL7 1025 aa18.27■□□□□ 0.52
FBXO4-207ENST00000513496 EAPPQ56P03 285 aaPredicted RBP18.27■□□□□ 0.52
FBXO4-207ENST00000513496 JDP2Q8WYK2 163 aa18.27■□□□□ 0.52
FBXO4-207ENST00000513496 TSPYL4Q9UJ04 414 aa18.27■□□□□ 0.52
FBXO4-207ENST00000513496 PPP1R42Q7Z4L9 355 aa18.26■□□□□ 0.51
FBXO4-207ENST00000513496 RBM17Q96I25 401 aaKnown RBP18.26■□□□□ 0.51
FBXO4-207ENST00000513496 TMEM88BA6NKF7 163 aa18.25■□□□□ 0.51
FBXO4-207ENST00000513496 SLC10A5Q5PT55 438 aa18.25■□□□□ 0.51
FBXO4-207ENST00000513496 C3orf67Q6ZVT6 689 aa18.25■□□□□ 0.51
FBXO4-207ENST00000513496 TRPM7Q96QT4 1865 aa18.24■□□□□ 0.51
FBXO4-207ENST00000513496 PPEF1O14829 653 aaPredicted RBP18.24■□□□□ 0.51
FBXO4-207ENST00000513496 EIF6P56537 245 aaKnown RBP18.24■□□□□ 0.51
FBXO4-207ENST00000513496 RIPK4P57078 832 aa18.24■□□□□ 0.51
FBXO4-207ENST00000513496 RALBP1Q15311 655 aa18.24■□□□□ 0.51
FBXO4-207ENST00000513496 CLEC11AQ9Y240 323 aa18.24■□□□□ 0.51
FBXO4-207ENST00000513496 TMPOP42166 694 aaKnown RBP18.23■□□□□ 0.51
FBXO4-207ENST00000513496 PROSER3Q2NL68 480 aa18.23■□□□□ 0.51
FBXO4-207ENST00000513496 CNTROBQ8N137 903 aa18.23■□□□□ 0.51
FBXO4-207ENST00000513496 NLRP3Q96P20 1036 aa18.23■□□□□ 0.51
FBXO4-207ENST00000513496 EIF2S2P20042 333 aaKnown RBP18.22■□□□□ 0.51
FBXO4-207ENST00000513496 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
FBXO4-207ENST00000513496 MAP1SQ66K74 1059 aaPredicted RBP18.22■□□□□ 0.51
FBXO4-207ENST00000513496 SLC51AQ86UW1 340 aa18.22■□□□□ 0.51
FBXO4-207ENST00000513496 LARGE2Q8N3Y3 721 aa18.22■□□□□ 0.51
FBXO4-207ENST00000513496 UTP14AQ9BVJ6 771 aaKnown RBP18.22■□□□□ 0.51
FBXO4-207ENST00000513496 VEGFBP49765 207 aa18.21■□□□□ 0.51
FBXO4-207ENST00000513496 SCNN1DP51172 638 aa18.21■□□□□ 0.51
FBXO4-207ENST00000513496 VPS33BQ9H267 617 aa18.21■□□□□ 0.51
FBXO4-207ENST00000513496 ATP6V0A2Q9Y487 856 aa18.21■□□□□ 0.51
FBXO4-207ENST00000513496 GJA3Q9Y6H8 435 aa18.21■□□□□ 0.51
FBXO4-207ENST00000513496 TAF1P21675 1872 aa18.2■□□□□ 0.5
FBXO4-207ENST00000513496 RASSF10A6NK89 507 aa18.2■□□□□ 0.5
FBXO4-207ENST00000513496 ANXA1P04083 346 aa18.2■□□□□ 0.5
FBXO4-207ENST00000513496 HSP90AB3PQ58FF7 597 aa18.2■□□□□ 0.5
FBXO4-207ENST00000513496 FOXN1O15353 648 aa18.19■□□□□ 0.5
FBXO4-207ENST00000513496 CAPN15O75808 1086 aa18.19■□□□□ 0.5
FBXO4-207ENST00000513496 LMOD1P29536 600 aaPredicted RBP18.19■□□□□ 0.5
FBXO4-207ENST00000513496 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
FBXO4-207ENST00000513496 NLRP10Q86W26 655 aa18.19■□□□□ 0.5
FBXO4-207ENST00000513496 NIM1KQ8IY84 436 aa18.19■□□□□ 0.5
FBXO4-207ENST00000513496 RTFDC1Q9BY42 306 aaPredicted RBP18.19■□□□□ 0.5
FBXO4-207ENST00000513496 ABCC4O15439 1325 aa18.19■□□□□ 0.5
FBXO4-207ENST00000513496 CHL1O00533 1208 aa18.18■□□□□ 0.5
FBXO4-207ENST00000513496 TCERG1O14776 1098 aaKnown RBP18.18■□□□□ 0.5
FBXO4-207ENST00000513496 EPS15P42566 896 aa18.18■□□□□ 0.5
FBXO4-207ENST00000513496 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
FBXO4-207ENST00000513496 DDX21Q9NR30 783 aaKnown RBP eCLIP18.18■□□□□ 0.5
FBXO4-207ENST00000513496 LRRC37AA6NMS7 1700 aa18.18■□□□□ 0.5
FBXO4-207ENST00000513496 DDX60Q8IY21 1712 aaKnown RBP18.18■□□□□ 0.5
FBXO4-207ENST00000513496 THSD7BQ9C0I4 1608 aa18.17■□□□□ 0.5
FBXO4-207ENST00000513496 PPIP5K2O43314 1243 aa18.17■□□□□ 0.5
FBXO4-207ENST00000513496 BBOX1O75936 387 aa18.17■□□□□ 0.5
FBXO4-207ENST00000513496 TCIRG1Q13488 830 aa18.17■□□□□ 0.5
FBXO4-207ENST00000513496 USP50Q70EL3 339 aaPredicted RBP18.17■□□□□ 0.5
FBXO4-207ENST00000513496 XAGE3Q8WTP9 111 aa18.17■□□□□ 0.5
FBXO4-207ENST00000513496 TMX4Q9H1E5 349 aaPredicted RBP18.17■□□□□ 0.5
FBXO4-207ENST00000513496 WBP1LQ9NX94 342 aa18.17■□□□□ 0.5
FBXO4-207ENST00000513496 AOC3Q16853 763 aa18.16■□□□□ 0.5
FBXO4-207ENST00000513496 DEFB115Q30KQ5 88 aa18.16■□□□□ 0.5
FBXO4-207ENST00000513496 SP8Q8IXZ3 490 aa18.16■□□□□ 0.5
FBXO4-207ENST00000513496 SUPT20HQ8NEM7 779 aa18.16■□□□□ 0.5
FBXO4-207ENST00000513496 MYBBP1AQ9BQG0 1328 aaKnown RBP18.16■□□□□ 0.5
FBXO4-207ENST00000513496 CTCFP49711 727 aaPredicted RBP18.15■□□□□ 0.5
FBXO4-207ENST00000513496 ZNRF3Q9ULT6 936 aa18.15■□□□□ 0.5
FBXO4-207ENST00000513496 HCLS1P14317 486 aaPredicted RBP18.14■□□□□ 0.49
FBXO4-207ENST00000513496 CXCL9Q07325 125 aa18.14■□□□□ 0.49
FBXO4-207ENST00000513496 AIMP1Q12904 312 aaKnown RBP18.14■□□□□ 0.49
FBXO4-207ENST00000513496 KRT24Q2M2I5 525 aa18.14■□□□□ 0.49
FBXO4-207ENST00000513496 NECTIN2Q92692 538 aa18.14■□□□□ 0.49
FBXO4-207ENST00000513496 AIDAQ96BJ3 306 aa18.14■□□□□ 0.49
FBXO4-207ENST00000513496 GPRC5DQ9NZD1 345 aa18.14■□□□□ 0.49
FBXO4-207ENST00000513496 TRIM35Q9UPQ4 493 aa18.14■□□□□ 0.49
FBXO4-207ENST00000513496 SH3TC1Q8TE82 1336 aa18.14■□□□□ 0.49
FBXO4-207ENST00000513496 DUOX1Q9NRD9 1551 aa18.13■□□□□ 0.49
FBXO4-207ENST00000513496 HOXB7P09629 217 aa18.13■□□□□ 0.49
FBXO4-207ENST00000513496 KIAA2012Q0VF49 1180 aa18.13■□□□□ 0.49
FBXO4-207ENST00000513496 DPP8Q6V1X1 898 aaPredicted RBP18.13■□□□□ 0.49
FBXO4-207ENST00000513496 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
FBXO4-207ENST00000513496 MPNDQ8N594 471 aa18.13■□□□□ 0.49
FBXO4-207ENST00000513496 RUNDC1Q96C34 613 aa18.13■□□□□ 0.49
FBXO4-207ENST00000513496 ADARB2Q9NS39 739 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms