RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CHADLQ6NUI6 762 aa19.06■□□□□ 0.64
HMGCL-208ENST00000509389 SYNE4Q8N205 404 aa19.06■□□□□ 0.64
HMGCL-208ENST00000509389 ZNF541Q9H0D2 1346 aa19.06■□□□□ 0.64
HMGCL-208ENST00000509389 NTSR2O95665 410 aa19.06■□□□□ 0.64
HMGCL-208ENST00000509389 HOXA10P31260 410 aaPredicted RBP19.06■□□□□ 0.64
HMGCL-208ENST00000509389 IARSP41252 1262 aaKnown RBP19.06■□□□□ 0.64
HMGCL-208ENST00000509389 PROSER3Q2NL68 480 aa19.06■□□□□ 0.64
HMGCL-208ENST00000509389 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
HMGCL-208ENST00000509389 RPGRQ92834 1020 aaKnown RBP19.06■□□□□ 0.64
HMGCL-208ENST00000509389 L3MBTL3Q96JM7 780 aaPredicted RBP19.06■□□□□ 0.64
HMGCL-208ENST00000509389 IQCA1LA6NCM1 817 aa19.05■□□□□ 0.64
HMGCL-208ENST00000509389 ANXA1P04083 346 aa19.05■□□□□ 0.64
HMGCL-208ENST00000509389 NEUROD2Q15784 382 aa19.05■□□□□ 0.64
HMGCL-208ENST00000509389 PARP10Q53GL7 1025 aa19.04■□□□□ 0.64
HMGCL-208ENST00000509389 PPP1R42Q7Z4L9 355 aa19.04■□□□□ 0.64
HMGCL-208ENST00000509389 PSMD1Q99460 953 aa19.04■□□□□ 0.64
HMGCL-208ENST00000509389 TAF1DQ9H5J8 278 aaPredicted RBP19.04■□□□□ 0.64
HMGCL-208ENST00000509389 FZD9O00144 591 aa19.03■□□□□ 0.64
HMGCL-208ENST00000509389 CC2D2BQ6DHV5 1058 aa19.03■□□□□ 0.64
HMGCL-208ENST00000509389 C3orf67Q6ZVT6 689 aa19.03■□□□□ 0.64
HMGCL-208ENST00000509389 NECTIN2Q92692 538 aa19.03■□□□□ 0.64
HMGCL-208ENST00000509389 RBM17Q96I25 401 aaKnown RBP19.03■□□□□ 0.64
HMGCL-208ENST00000509389 CRAMP1Q96RY5 1269 aa19.03■□□□□ 0.64
HMGCL-208ENST00000509389 CHL1O00533 1208 aa19.02■□□□□ 0.64
HMGCL-208ENST00000509389 ANKRD36CQ5JPF3 1778 aa19.01■□□□□ 0.63
HMGCL-208ENST00000509389 COPS6Q7L5N1 327 aa19.01■□□□□ 0.63
HMGCL-208ENST00000509389 SLC51AQ86UW1 340 aa19.01■□□□□ 0.63
HMGCL-208ENST00000509389 LDHDQ86WU2 507 aa19.01■□□□□ 0.63
HMGCL-208ENST00000509389 RUNDC1Q96C34 613 aa19.01■□□□□ 0.63
HMGCL-208ENST00000509389 UTP14AQ9BVJ6 771 aaKnown RBP19.01■□□□□ 0.63
HMGCL-208ENST00000509389 TRIM35Q9UPQ4 493 aa19.01■□□□□ 0.63
HMGCL-208ENST00000509389 PPEF1O14829 653 aaPredicted RBP19■□□□□ 0.63
HMGCL-208ENST00000509389 AIMP1Q12904 312 aaKnown RBP19■□□□□ 0.63
HMGCL-208ENST00000509389 WDR43Q15061 677 aaKnown RBP eCLIP19■□□□□ 0.63
HMGCL-208ENST00000509389 KRT24Q2M2I5 525 aa19■□□□□ 0.63
HMGCL-208ENST00000509389 SLC10A5Q5PT55 438 aa19■□□□□ 0.63
HMGCL-208ENST00000509389 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
HMGCL-208ENST00000509389 XAGE3Q8WTP9 111 aa19■□□□□ 0.63
HMGCL-208ENST00000509389 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
HMGCL-208ENST00000509389 NLRP3Q96P20 1036 aa19■□□□□ 0.63
HMGCL-208ENST00000509389 HACL1Q9UJ83 578 aa19■□□□□ 0.63
HMGCL-208ENST00000509389 COL4A5P29400 1685 aa18.99■□□□□ 0.63
HMGCL-208ENST00000509389 TCERG1O14776 1098 aaKnown RBP18.99■□□□□ 0.63
HMGCL-208ENST00000509389 GRIPAP1Q4V328 841 aa18.99■□□□□ 0.63
HMGCL-208ENST00000509389 JDP2Q8WYK2 163 aa18.99■□□□□ 0.63
HMGCL-208ENST00000509389 DDX21Q9NR30 783 aaKnown RBP eCLIP18.99■□□□□ 0.63
HMGCL-208ENST00000509389 CREBZFQ9NS37 354 aa18.99■□□□□ 0.63
HMGCL-208ENST00000509389 ADAMTS8Q9UP79 889 aa18.99■□□□□ 0.63
HMGCL-208ENST00000509389 LAS1LQ9Y4W2 734 aaKnown RBP18.99■□□□□ 0.63
HMGCL-208ENST00000509389 EAPPQ56P03 285 aaPredicted RBP18.98■□□□□ 0.63
HMGCL-208ENST00000509389 GPC2Q8N158 579 aa18.98■□□□□ 0.63
HMGCL-208ENST00000509389 RNF123Q5XPI4 1314 aa18.98■□□□□ 0.63
HMGCL-208ENST00000509389 PASKQ96RG2 1323 aa18.98■□□□□ 0.63
HMGCL-208ENST00000509389 PCNTO95613 3336 aa18.97■□□□□ 0.63
HMGCL-208ENST00000509389 EPHX2P34913 555 aa18.97■□□□□ 0.63
HMGCL-208ENST00000509389 HSP90AB3PQ58FF7 597 aa18.97■□□□□ 0.63
HMGCL-208ENST00000509389 NLRP10Q86W26 655 aa18.97■□□□□ 0.63
HMGCL-208ENST00000509389 LAMB2P55268 1798 aa18.97■□□□□ 0.63
HMGCL-208ENST00000509389 ADAMTSL1Q8N6G6 1762 aa18.97■□□□□ 0.63
HMGCL-208ENST00000509389 EIF6P56537 245 aaKnown RBP18.96■□□□□ 0.63
HMGCL-208ENST00000509389 TCIRG1Q13488 830 aa18.96■□□□□ 0.63
HMGCL-208ENST00000509389 COL13A1Q5TAT6 717 aaPredicted RBP18.96■□□□□ 0.63
HMGCL-208ENST00000509389 ZBED9Q6R2W3 1325 aa18.96■□□□□ 0.63
HMGCL-208ENST00000509389 ITGBL1O95965 494 aaPredicted RBP18.95■□□□□ 0.62
HMGCL-208ENST00000509389 LARGE2Q8N3Y3 721 aa18.95■□□□□ 0.62
HMGCL-208ENST00000509389 CHPF2Q9P2E5 772 aa18.95■□□□□ 0.62
HMGCL-208ENST00000509389 CLEC11AQ9Y240 323 aa18.95■□□□□ 0.62
HMGCL-208ENST00000509389 ATP6V0A2Q9Y487 856 aa18.95■□□□□ 0.62
HMGCL-208ENST00000509389 HSPA1AP0DMV8 641 aaKnown RBP18.94■□□□□ 0.62
HMGCL-208ENST00000509389 HSPA1BP0DMV9 641 aaKnown RBP18.94■□□□□ 0.62
HMGCL-208ENST00000509389 HCLS1P14317 486 aaPredicted RBP18.94■□□□□ 0.62
HMGCL-208ENST00000509389 PNMA8AQ86V59 439 aaPredicted RBP18.94■□□□□ 0.62
HMGCL-208ENST00000509389 MKRN1Q9UHC7 482 aaKnown RBP18.94■□□□□ 0.62
HMGCL-208ENST00000509389 GJA3Q9Y6H8 435 aa18.94■□□□□ 0.62
HMGCL-208ENST00000509389 ABCC4O15439 1325 aa18.94■□□□□ 0.62
HMGCL-208ENST00000509389 HDGFL1Q5TGJ6 251 aa18.93■□□□□ 0.62
HMGCL-208ENST00000509389 TRMT112Q9UI30 125 aaKnown RBP18.93■□□□□ 0.62
HMGCL-208ENST00000509389 LTBP1Q14766 1721 aa18.93■□□□□ 0.62
HMGCL-208ENST00000509389 HOXB7P09629 217 aa18.93■□□□□ 0.62
HMGCL-208ENST00000509389 CFAP44Q96MT7 982 aa18.93■□□□□ 0.62
HMGCL-208ENST00000509389 TMX4Q9H1E5 349 aaPredicted RBP18.93■□□□□ 0.62
HMGCL-208ENST00000509389 PPIP5K2O43314 1243 aa18.92■□□□□ 0.62
HMGCL-208ENST00000509389 BBOX1O75936 387 aa18.92■□□□□ 0.62
HMGCL-208ENST00000509389 CENPBP07199 599 aaPredicted RBP18.92■□□□□ 0.62
HMGCL-208ENST00000509389 HNRNPUQ00839 825 aaKnown RBP eCLIP18.92■□□□□ 0.62
HMGCL-208ENST00000509389 NIM1KQ8IY84 436 aa18.92■□□□□ 0.62
HMGCL-208ENST00000509389 PLBD2Q8NHP8 589 aa18.92■□□□□ 0.62
HMGCL-208ENST00000509389 SH3TC1Q8TE82 1336 aa18.92■□□□□ 0.62
HMGCL-208ENST00000509389 TAF1P21675 1872 aa18.91■□□□□ 0.62
HMGCL-208ENST00000509389 AOC3Q16853 763 aa18.91■□□□□ 0.62
HMGCL-208ENST00000509389 MAP1SQ66K74 1059 aaPredicted RBP18.91■□□□□ 0.62
HMGCL-208ENST00000509389 SP8Q8IXZ3 490 aa18.91■□□□□ 0.62
HMGCL-208ENST00000509389 CNTROBQ8N137 903 aa18.91■□□□□ 0.62
HMGCL-208ENST00000509389 ZNF428Q96B54 188 aa18.91■□□□□ 0.62
HMGCL-208ENST00000509389 VPS33BQ9H267 617 aa18.91■□□□□ 0.62
HMGCL-208ENST00000509389 DBF4Q9UBU7 674 aaPredicted RBP18.91■□□□□ 0.62
HMGCL-208ENST00000509389 CNTNAP1P78357 1384 aa18.9■□□□□ 0.62
HMGCL-208ENST00000509389 TMEM88BA6NKF7 163 aa18.9■□□□□ 0.62
HMGCL-208ENST00000509389 LMOD1P29536 600 aaPredicted RBP18.9■□□□□ 0.62
HMGCL-208ENST00000509389 SCNN1DP51172 638 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms