RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 PNMA8AQ86V59 439 aaPredicted RBP16.83■□□□□ 0.28
SNHG4-204ENST00000507197 CRAMP1Q96RY5 1269 aa16.83■□□□□ 0.28
SNHG4-204ENST00000507197 TAF1DQ9H5J8 278 aaPredicted RBP16.83■□□□□ 0.28
SNHG4-204ENST00000507197 RNF123Q5XPI4 1314 aa16.82■□□□□ 0.28
SNHG4-204ENST00000507197 MYBBP1AQ9BQG0 1328 aaKnown RBP16.82■□□□□ 0.28
SNHG4-204ENST00000507197 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
SNHG4-204ENST00000507197 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
SNHG4-204ENST00000507197 GPC2Q8N158 579 aa16.82■□□□□ 0.28
SNHG4-204ENST00000507197 NLRP3Q96P20 1036 aa16.82■□□□□ 0.28
SNHG4-204ENST00000507197 ZNF541Q9H0D2 1346 aa16.81■□□□□ 0.28
SNHG4-204ENST00000507197 NTSR2O95665 410 aa16.81■□□□□ 0.28
SNHG4-204ENST00000507197 EIF6P56537 245 aaKnown RBP16.81■□□□□ 0.28
SNHG4-204ENST00000507197 UTP14AQ9BVJ6 771 aaKnown RBP16.81■□□□□ 0.28
SNHG4-204ENST00000507197 SCN4AP35499 1836 aa16.8■□□□□ 0.28
SNHG4-204ENST00000507197 PPEF1O14829 653 aaPredicted RBP16.8■□□□□ 0.28
SNHG4-204ENST00000507197 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
SNHG4-204ENST00000507197 POTEJP0CG39 1038 aa16.8■□□□□ 0.28
SNHG4-204ENST00000507197 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNHG4-204ENST00000507197 EAPPQ56P03 285 aaPredicted RBP16.8■□□□□ 0.28
SNHG4-204ENST00000507197 CLEC11AQ9Y240 323 aa16.8■□□□□ 0.28
SNHG4-204ENST00000507197 NUP98P52948 1817 aa16.8■□□□□ 0.28
SNHG4-204ENST00000507197 EPHX2P34913 555 aa16.79■□□□□ 0.28
SNHG4-204ENST00000507197 PDIA6Q15084 440 aa16.79■□□□□ 0.28
SNHG4-204ENST00000507197 HSPA1AP0DMV8 641 aaKnown RBP16.78■□□□□ 0.28
SNHG4-204ENST00000507197 HSPA1BP0DMV9 641 aaKnown RBP16.78■□□□□ 0.28
SNHG4-204ENST00000507197 LMOD1P29536 600 aaPredicted RBP16.78■□□□□ 0.28
SNHG4-204ENST00000507197 DDX10Q13206 875 aaKnown RBP16.78■□□□□ 0.28
SNHG4-204ENST00000507197 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
SNHG4-204ENST00000507197 SLC10A5Q5PT55 438 aa16.78■□□□□ 0.28
SNHG4-204ENST00000507197 LRP10Q7Z4F1 713 aa16.78■□□□□ 0.28
SNHG4-204ENST00000507197 LARGE2Q8N3Y3 721 aa16.78■□□□□ 0.28
SNHG4-204ENST00000507197 RUNDC1Q96C34 613 aa16.78■□□□□ 0.28
SNHG4-204ENST00000507197 VPS33BQ9H267 617 aa16.78■□□□□ 0.28
SNHG4-204ENST00000507197 SNED1Q8TER0 1413 aa16.78■□□□□ 0.28
SNHG4-204ENST00000507197 PASKQ96RG2 1323 aa16.77■□□□□ 0.28
SNHG4-204ENST00000507197 COL13A1Q5TAT6 717 aaPredicted RBP16.77■□□□□ 0.28
SNHG4-204ENST00000507197 COPS6Q7L5N1 327 aa16.77■□□□□ 0.28
SNHG4-204ENST00000507197 PCNTO95613 3336 aa16.76■□□□□ 0.27
SNHG4-204ENST00000507197 TMEM88BA6NKF7 163 aa16.76■□□□□ 0.27
SNHG4-204ENST00000507197 CHL1O00533 1208 aa16.76■□□□□ 0.27
SNHG4-204ENST00000507197 PROSER3Q2NL68 480 aa16.76■□□□□ 0.27
SNHG4-204ENST00000507197 NIM1KQ8IY84 436 aa16.76■□□□□ 0.27
SNHG4-204ENST00000507197 SUPT20HQ8NEM7 779 aa16.76■□□□□ 0.27
SNHG4-204ENST00000507197 DDX21Q9NR30 783 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNHG4-204ENST00000507197 MKRN1Q9UHC7 482 aaKnown RBP16.76■□□□□ 0.27
SNHG4-204ENST00000507197 ATP6V0A2Q9Y487 856 aa16.76■□□□□ 0.27
SNHG4-204ENST00000507197 BBOX1O75936 387 aa16.75■□□□□ 0.27
SNHG4-204ENST00000507197 HOXB7P09629 217 aa16.75■□□□□ 0.27
SNHG4-204ENST00000507197 AIMP1Q12904 312 aaKnown RBP16.75■□□□□ 0.27
SNHG4-204ENST00000507197 TCIRG1Q13488 830 aa16.75■□□□□ 0.27
SNHG4-204ENST00000507197 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
SNHG4-204ENST00000507197 XAGE3Q8WTP9 111 aa16.75■□□□□ 0.27
SNHG4-204ENST00000507197 GJA3Q9Y6H8 435 aa16.75■□□□□ 0.27
SNHG4-204ENST00000507197 TCERG1O14776 1098 aaKnown RBP16.74■□□□□ 0.27
SNHG4-204ENST00000507197 ITGBL1O95965 494 aaPredicted RBP16.74■□□□□ 0.27
SNHG4-204ENST00000507197 ANXA1P04083 346 aa16.74■□□□□ 0.27
SNHG4-204ENST00000507197 NLRP10Q86W26 655 aa16.74■□□□□ 0.27
SNHG4-204ENST00000507197 TNS4Q8IZW8 715 aa16.74■□□□□ 0.27
SNHG4-204ENST00000507197 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
SNHG4-204ENST00000507197 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
SNHG4-204ENST00000507197 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
SNHG4-204ENST00000507197 CNTNAP1P78357 1384 aa16.74■□□□□ 0.27
SNHG4-204ENST00000507197 SH3TC1Q8TE82 1336 aa16.73■□□□□ 0.27
SNHG4-204ENST00000507197 PPIP5K2O43314 1243 aa16.73■□□□□ 0.27
SNHG4-204ENST00000507197 C3orf67Q6ZVT6 689 aa16.73■□□□□ 0.27
SNHG4-204ENST00000507197 DDX46Q7L014 1031 aaKnown RBP16.73■□□□□ 0.27
SNHG4-204ENST00000507197 CNTROBQ8N137 903 aa16.73■□□□□ 0.27
SNHG4-204ENST00000507197 ABCC4O15439 1325 aa16.72■□□□□ 0.27
SNHG4-204ENST00000507197 HDGFL1Q5TGJ6 251 aa16.72■□□□□ 0.27
SNHG4-204ENST00000507197 TMC4Q7Z404 712 aa16.72■□□□□ 0.27
SNHG4-204ENST00000507197 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
SNHG4-204ENST00000507197 DBF4Q9UBU7 674 aaPredicted RBP16.72■□□□□ 0.27
SNHG4-204ENST00000507197 TRIM35Q9UPQ4 493 aa16.72■□□□□ 0.27
SNHG4-204ENST00000507197 MAP1SQ66K74 1059 aaPredicted RBP16.71■□□□□ 0.27
SNHG4-204ENST00000507197 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
SNHG4-204ENST00000507197 ANKRD13DQ6ZTN6 518 aa16.71■□□□□ 0.27
SNHG4-204ENST00000507197 USP50Q70EL3 339 aaPredicted RBP16.71■□□□□ 0.27
SNHG4-204ENST00000507197 PLBD2Q8NHP8 589 aa16.71■□□□□ 0.27
SNHG4-204ENST00000507197 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
SNHG4-204ENST00000507197 RTFDC1Q9BY42 306 aaPredicted RBP16.71■□□□□ 0.27
SNHG4-204ENST00000507197 CHPF2Q9P2E5 772 aa16.71■□□□□ 0.27
SNHG4-204ENST00000507197 ADAMTS8Q9UP79 889 aa16.71■□□□□ 0.27
SNHG4-204ENST00000507197 CALD1Q05682 793 aaKnown RBP16.7■□□□□ 0.26
SNHG4-204ENST00000507197 MPNDQ8N594 471 aa16.7■□□□□ 0.26
SNHG4-204ENST00000507197 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
SNHG4-204ENST00000507197 HCLS1P14317 486 aaPredicted RBP16.69■□□□□ 0.26
SNHG4-204ENST00000507197 SCNN1DP51172 638 aa16.69■□□□□ 0.26
SNHG4-204ENST00000507197 GRAPQ13588 217 aa16.69■□□□□ 0.26
SNHG4-204ENST00000507197 AOC3Q16853 763 aa16.69■□□□□ 0.26
SNHG4-204ENST00000507197 GRAPLQ8TC17 118 aaPredicted RBP16.69■□□□□ 0.26
SNHG4-204ENST00000507197 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
SNHG4-204ENST00000507197 ZNRF3Q9ULT6 936 aa16.69■□□□□ 0.26
SNHG4-204ENST00000507197 ADAMTSL1Q8N6G6 1762 aa16.69■□□□□ 0.26
SNHG4-204ENST00000507197 VEGFBP49765 207 aa16.68■□□□□ 0.26
SNHG4-204ENST00000507197 KRT24Q2M2I5 525 aa16.68■□□□□ 0.26
SNHG4-204ENST00000507197 DEFB115Q30KQ5 88 aa16.68■□□□□ 0.26
SNHG4-204ENST00000507197 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
SNHG4-204ENST00000507197 COL4A5P29400 1685 aa16.67■□□□□ 0.26
SNHG4-204ENST00000507197 RASSF10A6NK89 507 aa16.67■□□□□ 0.26
SNHG4-204ENST00000507197 EPS15P42566 896 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms