RNA–Protein interactions for RNA: ENST00000507179.1

SKI-203, Transcript of SKI proto-oncogene, humanhuman

TSL 2

Gene SKI, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-203ENST00000507179 SYNE4Q8N205 404 aa16.88■□□□□ 0.29
SKI-203ENST00000507179 NECTIN2Q92692 538 aa16.88■□□□□ 0.29
SKI-203ENST00000507179 PCNTO95613 3336 aa16.88■□□□□ 0.29
SKI-203ENST00000507179 CHL1O00533 1208 aa16.87■□□□□ 0.29
SKI-203ENST00000507179 L3MBTL3Q96JM7 780 aaPredicted RBP16.87■□□□□ 0.29
SKI-203ENST00000507179 ADAMTS8Q9UP79 889 aa16.87■□□□□ 0.29
SKI-203ENST00000507179 COL4A5P29400 1685 aa16.87■□□□□ 0.29
SKI-203ENST00000507179 RIC1Q4ADV7 1423 aa16.87■□□□□ 0.29
SKI-203ENST00000507179 FZD9O00144 591 aa16.85■□□□□ 0.29
SKI-203ENST00000507179 IARSP41252 1262 aaKnown RBP16.85■□□□□ 0.29
SKI-203ENST00000507179 LMOD3Q0VAK6 560 aa16.85■□□□□ 0.29
SKI-203ENST00000507179 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
SKI-203ENST00000507179 COPS6Q7L5N1 327 aa16.85■□□□□ 0.29
SKI-203ENST00000507179 RPGRQ92834 1020 aaKnown RBP16.85■□□□□ 0.29
SKI-203ENST00000507179 RUNDC1Q96C34 613 aa16.85■□□□□ 0.29
SKI-203ENST00000507179 PSMD1Q99460 953 aa16.85■□□□□ 0.29
SKI-203ENST00000507179 TAF1DQ9H5J8 278 aaPredicted RBP16.85■□□□□ 0.29
SKI-203ENST00000507179 XAGE3Q8WTP9 111 aa16.84■□□□□ 0.29
SKI-203ENST00000507179 CRAMP1Q96RY5 1269 aa16.84■□□□□ 0.29
SKI-203ENST00000507179 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.28
SKI-203ENST00000507179 AIMP1Q12904 312 aaKnown RBP16.83■□□□□ 0.28
SKI-203ENST00000507179 PARP10Q53GL7 1025 aa16.83■□□□□ 0.28
SKI-203ENST00000507179 SLC10A5Q5PT55 438 aa16.83■□□□□ 0.28
SKI-203ENST00000507179 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.28
SKI-203ENST00000507179 PPP1R42Q7Z4L9 355 aa16.82■□□□□ 0.28
SKI-203ENST00000507179 ZNF428Q96B54 188 aa16.82■□□□□ 0.28
SKI-203ENST00000507179 UTP14AQ9BVJ6 771 aaKnown RBP16.82■□□□□ 0.28
SKI-203ENST00000507179 PRKRIP1Q9H875 184 aaPredicted RBP16.82■□□□□ 0.28
SKI-203ENST00000507179 IQCA1LA6NCM1 817 aa16.81■□□□□ 0.28
SKI-203ENST00000507179 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
SKI-203ENST00000507179 WDR43Q15061 677 aaKnown RBP eCLIP16.81■□□□□ 0.28
SKI-203ENST00000507179 NLRP10Q86W26 655 aa16.81■□□□□ 0.28
SKI-203ENST00000507179 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
SKI-203ENST00000507179 DDX21Q9NR30 783 aaKnown RBP eCLIP16.81■□□□□ 0.28
SKI-203ENST00000507179 CHPF2Q9P2E5 772 aa16.81■□□□□ 0.28
SKI-203ENST00000507179 RNF123Q5XPI4 1314 aa16.8■□□□□ 0.28
SKI-203ENST00000507179 PASKQ96RG2 1323 aa16.8■□□□□ 0.28
SKI-203ENST00000507179 TCIRG1Q13488 830 aa16.8■□□□□ 0.28
SKI-203ENST00000507179 CC2D2BQ6DHV5 1058 aa16.8■□□□□ 0.28
SKI-203ENST00000507179 LDHDQ86WU2 507 aa16.8■□□□□ 0.28
SKI-203ENST00000507179 NLRP3Q96P20 1036 aa16.8■□□□□ 0.28
SKI-203ENST00000507179 ITGBL1O95965 494 aaPredicted RBP16.79■□□□□ 0.28
SKI-203ENST00000507179 HCLS1P14317 486 aaPredicted RBP16.79■□□□□ 0.28
SKI-203ENST00000507179 COL13A1Q5TAT6 717 aaPredicted RBP16.79■□□□□ 0.28
SKI-203ENST00000507179 HACL1Q9UJ83 578 aa16.79■□□□□ 0.28
SKI-203ENST00000507179 ABCC4O15439 1325 aa16.78■□□□□ 0.28
SKI-203ENST00000507179 SCN4AP35499 1836 aa16.78■□□□□ 0.28
SKI-203ENST00000507179 EPHX2P34913 555 aa16.78■□□□□ 0.28
SKI-203ENST00000507179 EAPPQ56P03 285 aaPredicted RBP16.78■□□□□ 0.28
SKI-203ENST00000507179 GPC2Q8N158 579 aa16.78■□□□□ 0.28
SKI-203ENST00000507179 CREBZFQ9NS37 354 aa16.78■□□□□ 0.28
SKI-203ENST00000507179 MBIPQ9NS73 344 aa16.78■□□□□ 0.28
SKI-203ENST00000507179 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
SKI-203ENST00000507179 ADAMTSL1Q8N6G6 1762 aa16.77■□□□□ 0.28
SKI-203ENST00000507179 ZNF853P0CG23 659 aa16.77■□□□□ 0.28
SKI-203ENST00000507179 HDGFL1Q5TGJ6 251 aa16.77■□□□□ 0.28
SKI-203ENST00000507179 JDP2Q8WYK2 163 aa16.77■□□□□ 0.28
SKI-203ENST00000507179 CFAP44Q96MT7 982 aa16.77■□□□□ 0.28
SKI-203ENST00000507179 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
SKI-203ENST00000507179 APAF1O14727 1248 aa16.76■□□□□ 0.27
SKI-203ENST00000507179 GRIPAP1Q4V328 841 aa16.76■□□□□ 0.27
SKI-203ENST00000507179 HSP90AB3PQ58FF7 597 aa16.76■□□□□ 0.27
SKI-203ENST00000507179 DUSP27Q5VZP5 1158 aa16.76■□□□□ 0.27
SKI-203ENST00000507179 LARGE2Q8N3Y3 721 aa16.76■□□□□ 0.27
SKI-203ENST00000507179 MKRN1Q9UHC7 482 aaKnown RBP16.76■□□□□ 0.27
SKI-203ENST00000507179 TRMT112Q9UI30 125 aaKnown RBP16.76■□□□□ 0.27
SKI-203ENST00000507179 GJA3Q9Y6H8 435 aa16.76■□□□□ 0.27
SKI-203ENST00000507179 ANKRD36CQ5JPF3 1778 aa16.75■□□□□ 0.27
SKI-203ENST00000507179 HOXB7P09629 217 aa16.75■□□□□ 0.27
SKI-203ENST00000507179 EPS15P42566 896 aa16.75■□□□□ 0.27
SKI-203ENST00000507179 SCNN1DP51172 638 aa16.75■□□□□ 0.27
SKI-203ENST00000507179 AOC3Q16853 763 aa16.75■□□□□ 0.27
SKI-203ENST00000507179 MAP1SQ66K74 1059 aaPredicted RBP16.75■□□□□ 0.27
SKI-203ENST00000507179 PLBD2Q8NHP8 589 aa16.75■□□□□ 0.27
SKI-203ENST00000507179 SH3TC1Q8TE82 1336 aa16.74■□□□□ 0.27
SKI-203ENST00000507179 ATP5J2-PTCD1G3V325 749 aa16.74■□□□□ 0.27
SKI-203ENST00000507179 HSPA1AP0DMV8 641 aaKnown RBP16.74■□□□□ 0.27
SKI-203ENST00000507179 HSPA1BP0DMV9 641 aaKnown RBP16.74■□□□□ 0.27
SKI-203ENST00000507179 EIF6P56537 245 aaKnown RBP16.74■□□□□ 0.27
SKI-203ENST00000507179 CCDC184Q52MB2 194 aa16.74■□□□□ 0.27
SKI-203ENST00000507179 ANKRD13DQ6ZTN6 518 aa16.74■□□□□ 0.27
SKI-203ENST00000507179 ISCA1Q9BUE6 129 aa16.74■□□□□ 0.27
SKI-203ENST00000507179 RTFDC1Q9BY42 306 aaPredicted RBP16.74■□□□□ 0.27
SKI-203ENST00000507179 DBF4Q9UBU7 674 aaPredicted RBP16.74■□□□□ 0.27
SKI-203ENST00000507179 LAMB2P55268 1798 aa16.74■□□□□ 0.27
SKI-203ENST00000507179 PPIP5K2O43314 1243 aa16.73■□□□□ 0.27
SKI-203ENST00000507179 SP8Q8IXZ3 490 aa16.73■□□□□ 0.27
SKI-203ENST00000507179 CLEC11AQ9Y240 323 aa16.73■□□□□ 0.27
SKI-203ENST00000507179 COL4A1P02462 1669 aa16.72■□□□□ 0.27
SKI-203ENST00000507179 BBOX1O75936 387 aa16.72■□□□□ 0.27
SKI-203ENST00000507179 FMR1Q06787 632 aaKnown RBP eCLIP16.72■□□□□ 0.27
SKI-203ENST00000507179 PNMA8AQ86V59 439 aaPredicted RBP16.72■□□□□ 0.27
SKI-203ENST00000507179 NIM1KQ8IY84 436 aa16.72■□□□□ 0.27
SKI-203ENST00000507179 CNTROBQ8N137 903 aa16.72■□□□□ 0.27
SKI-203ENST00000507179 FAM89AQ96GI7 184 aa16.72■□□□□ 0.27
SKI-203ENST00000507179 CNTNAP1P78357 1384 aa16.72■□□□□ 0.27
SKI-203ENST00000507179 ELL2O00472 640 aaPredicted RBP16.71■□□□□ 0.27
SKI-203ENST00000507179 CXCL9Q07325 125 aa16.71■□□□□ 0.27
SKI-203ENST00000507179 GRAPQ13588 217 aa16.71■□□□□ 0.27
SKI-203ENST00000507179 C8orf58Q8NAV2 365 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms