RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 MKRN1Q9UHC7 482 aaKnown RBP14.95□□□□□ -0.02
SIL1-208ENST00000505945 NTSR2O95665 410 aa14.94□□□□□ -0.02
SIL1-208ENST00000505945 HSPA1AP0DMV8 641 aaKnown RBP14.94□□□□□ -0.02
SIL1-208ENST00000505945 HSPA1BP0DMV9 641 aaKnown RBP14.94□□□□□ -0.02
SIL1-208ENST00000505945 PROSER3Q2NL68 480 aa14.94□□□□□ -0.02
SIL1-208ENST00000505945 CC2D2BQ6DHV5 1058 aa14.94□□□□□ -0.02
SIL1-208ENST00000505945 C3orf67Q6ZVT6 689 aa14.94□□□□□ -0.02
SIL1-208ENST00000505945 SLC51AQ86UW1 340 aa14.94□□□□□ -0.02
SIL1-208ENST00000505945 JDP2Q8WYK2 163 aa14.94□□□□□ -0.02
SIL1-208ENST00000505945 PSMD1Q99460 953 aa14.94□□□□□ -0.02
SIL1-208ENST00000505945 HACL1Q9UJ83 578 aa14.94□□□□□ -0.02
SIL1-208ENST00000505945 SCN4AP35499 1836 aa14.94□□□□□ -0.02
SIL1-208ENST00000505945 RNF123Q5XPI4 1314 aa14.93□□□□□ -0.02
SIL1-208ENST00000505945 SNED1Q8TER0 1413 aa14.93□□□□□ -0.02
SIL1-208ENST00000505945 EPHX2P34913 555 aa14.93□□□□□ -0.02
SIL1-208ENST00000505945 DDX10Q13206 875 aaKnown RBP14.93□□□□□ -0.02
SIL1-208ENST00000505945 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
SIL1-208ENST00000505945 PPP1R42Q7Z4L9 355 aa14.93□□□□□ -0.02
SIL1-208ENST00000505945 NECTIN2Q92692 538 aa14.93□□□□□ -0.02
SIL1-208ENST00000505945 RBM17Q96I25 401 aaKnown RBP14.93□□□□□ -0.02
SIL1-208ENST00000505945 CRAMP1Q96RY5 1269 aa14.93□□□□□ -0.02
SIL1-208ENST00000505945 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
SIL1-208ENST00000505945 IBTKQ9P2D0 1353 aaPredicted RBP14.93□□□□□ -0.02
SIL1-208ENST00000505945 PASKQ96RG2 1323 aa14.92□□□□□ -0.02
SIL1-208ENST00000505945 ITGBL1O95965 494 aaPredicted RBP14.92□□□□□ -0.02
SIL1-208ENST00000505945 PARP10Q53GL7 1025 aa14.92□□□□□ -0.02
SIL1-208ENST00000505945 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
SIL1-208ENST00000505945 GPC2Q8N158 579 aa14.92□□□□□ -0.02
SIL1-208ENST00000505945 BABAM1Q9NWV8 329 aa14.92□□□□□ -0.02
SIL1-208ENST00000505945 RIC1Q4ADV7 1423 aa14.92□□□□□ -0.02
SIL1-208ENST00000505945 PPEF1O14829 653 aaPredicted RBP14.91□□□□□ -0.02
SIL1-208ENST00000505945 LMOD3Q0VAK6 560 aa14.91□□□□□ -0.02
SIL1-208ENST00000505945 AIMP1Q12904 312 aaKnown RBP14.91□□□□□ -0.02
SIL1-208ENST00000505945 COPS6Q7L5N1 327 aa14.91□□□□□ -0.02
SIL1-208ENST00000505945 NLRP3Q96P20 1036 aa14.91□□□□□ -0.02
SIL1-208ENST00000505945 UTP14AQ9BVJ6 771 aaKnown RBP14.91□□□□□ -0.02
SIL1-208ENST00000505945 GJA3Q9Y6H8 435 aa14.91□□□□□ -0.02
SIL1-208ENST00000505945 COL4A5P29400 1685 aa14.9□□□□□ -0.02
SIL1-208ENST00000505945 EIF6P56537 245 aaKnown RBP14.9□□□□□ -0.02
SIL1-208ENST00000505945 KRT24Q2M2I5 525 aa14.9□□□□□ -0.02
SIL1-208ENST00000505945 GRIPAP1Q4V328 841 aa14.9□□□□□ -0.02
SIL1-208ENST00000505945 SLC10A5Q5PT55 438 aa14.9□□□□□ -0.02
SIL1-208ENST00000505945 PNMA8AQ86V59 439 aaPredicted RBP14.9□□□□□ -0.02
SIL1-208ENST00000505945 TNS4Q8IZW8 715 aa14.9□□□□□ -0.02
SIL1-208ENST00000505945 LARGE2Q8N3Y3 721 aa14.9□□□□□ -0.02
SIL1-208ENST00000505945 LAS1LQ9Y4W2 734 aaKnown RBP14.9□□□□□ -0.02
SIL1-208ENST00000505945 CHL1O00533 1208 aa14.89□□□□□ -0.03
SIL1-208ENST00000505945 MAP1SQ66K74 1059 aaPredicted RBP14.89□□□□□ -0.03
SIL1-208ENST00000505945 CNTROBQ8N137 903 aa14.89□□□□□ -0.03
SIL1-208ENST00000505945 XAGE3Q8WTP9 111 aa14.89□□□□□ -0.03
SIL1-208ENST00000505945 MYBBP1AQ9BQG0 1328 aaKnown RBP14.89□□□□□ -0.03
SIL1-208ENST00000505945 TMEM88BA6NKF7 163 aa14.88□□□□□ -0.03
SIL1-208ENST00000505945 CAPN15O75808 1086 aa14.88□□□□□ -0.03
SIL1-208ENST00000505945 HCLS1P14317 486 aaPredicted RBP14.88□□□□□ -0.03
SIL1-208ENST00000505945 NLRP10Q86W26 655 aa14.88□□□□□ -0.03
SIL1-208ENST00000505945 TMX4Q9H1E5 349 aaPredicted RBP14.88□□□□□ -0.03
SIL1-208ENST00000505945 TRIM35Q9UPQ4 493 aa14.88□□□□□ -0.03
SIL1-208ENST00000505945 ATP6V0A2Q9Y487 856 aa14.88□□□□□ -0.03
SIL1-208ENST00000505945 CNTNAP1P78357 1384 aa14.87□□□□□ -0.03
SIL1-208ENST00000505945 EPS15P42566 896 aa14.87□□□□□ -0.03
SIL1-208ENST00000505945 TCIRG1Q13488 830 aa14.87□□□□□ -0.03
SIL1-208ENST00000505945 HSP90AB3PQ58FF7 597 aa14.87□□□□□ -0.03
SIL1-208ENST00000505945 ZNF428Q96B54 188 aa14.87□□□□□ -0.03
SIL1-208ENST00000505945 RUNDC1Q96C34 613 aa14.87□□□□□ -0.03
SIL1-208ENST00000505945 DDX21Q9NR30 783 aaKnown RBP eCLIP14.87□□□□□ -0.03
SIL1-208ENST00000505945 ADAMTSL1Q8N6G6 1762 aa14.86□□□□□ -0.03
SIL1-208ENST00000505945 PPIP5K2O43314 1243 aa14.86□□□□□ -0.03
SIL1-208ENST00000505945 LMOD1P29536 600 aaPredicted RBP14.86□□□□□ -0.03
SIL1-208ENST00000505945 VEGFBP49765 207 aa14.86□□□□□ -0.03
SIL1-208ENST00000505945 SCNN1DP51172 638 aa14.86□□□□□ -0.03
SIL1-208ENST00000505945 WDR43Q15061 677 aaKnown RBP eCLIP14.86□□□□□ -0.03
SIL1-208ENST00000505945 AOC3Q16853 763 aa14.86□□□□□ -0.03
SIL1-208ENST00000505945 NIM1KQ8IY84 436 aa14.86□□□□□ -0.03
SIL1-208ENST00000505945 CHPF2Q9P2E5 772 aa14.86□□□□□ -0.03
SIL1-208ENST00000505945 TRMT112Q9UI30 125 aaKnown RBP14.86□□□□□ -0.03
SIL1-208ENST00000505945 ADAMTS8Q9UP79 889 aa14.86□□□□□ -0.03
SIL1-208ENST00000505945 ABCC4O15439 1325 aa14.86□□□□□ -0.03
SIL1-208ENST00000505945 BBOX1O75936 387 aa14.85□□□□□ -0.03
SIL1-208ENST00000505945 SP8Q8IXZ3 490 aa14.84□□□□□ -0.03
SIL1-208ENST00000505945 SH3TC1Q8TE82 1336 aa14.84□□□□□ -0.03
SIL1-208ENST00000505945 LTBP1Q14766 1721 aa14.83□□□□□ -0.03
SIL1-208ENST00000505945 FOXN1O15353 648 aa14.83□□□□□ -0.04
SIL1-208ENST00000505945 FMR1Q06787 632 aaKnown RBP eCLIP14.83□□□□□ -0.04
SIL1-208ENST00000505945 HDGFL1Q5TGJ6 251 aa14.83□□□□□ -0.04
SIL1-208ENST00000505945 DPP8Q6V1X1 898 aaPredicted RBP14.83□□□□□ -0.04
SIL1-208ENST00000505945 DDX46Q7L014 1031 aaKnown RBP14.83□□□□□ -0.04
SIL1-208ENST00000505945 MPNDQ8N594 471 aa14.83□□□□□ -0.04
SIL1-208ENST00000505945 SUPT20HQ8NEM7 779 aa14.83□□□□□ -0.04
SIL1-208ENST00000505945 VPS33BQ9H267 617 aa14.83□□□□□ -0.04
SIL1-208ENST00000505945 ZNRF3Q9ULT6 936 aa14.83□□□□□ -0.04
SIL1-208ENST00000505945 CXCL9Q07325 125 aa14.82□□□□□ -0.04
SIL1-208ENST00000505945 DEFB115Q30KQ5 88 aa14.82□□□□□ -0.04
SIL1-208ENST00000505945 ANKRD13DQ6ZTN6 518 aa14.82□□□□□ -0.04
SIL1-208ENST00000505945 PLBD2Q8NHP8 589 aa14.82□□□□□ -0.04
SIL1-208ENST00000505945 RTFDC1Q9BY42 306 aaPredicted RBP14.82□□□□□ -0.04
SIL1-208ENST00000505945 ABT1Q9ULW3 272 aaKnown RBP14.82□□□□□ -0.04
SIL1-208ENST00000505945 ANKRD36CQ5JPF3 1778 aa14.82□□□□□ -0.04
SIL1-208ENST00000505945 LAMB2P55268 1798 aa14.81□□□□□ -0.04
SIL1-208ENST00000505945 RASSF10A6NK89 507 aa14.81□□□□□ -0.04
SIL1-208ENST00000505945 ATP5J2-PTCD1G3V325 749 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms