RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 BNIP3LO60238 219 aa7.44□□□□□ -1.22
CHD1-203ENST00000505657 NLRP8Q86W28 1048 aa7.44□□□□□ -1.22
CHD1-203ENST00000505657 EDARADDQ8WWZ3 215 aa7.44□□□□□ -1.22
CHD1-203ENST00000505657 SUV39H2Q9H5I1 410 aa7.44□□□□□ -1.22
CHD1-203ENST00000505657 GPC6Q9Y625 555 aaPredicted RBP7.44□□□□□ -1.22
CHD1-203ENST00000505657 PTCD1O75127 700 aaKnown RBP7.43□□□□□ -1.22
CHD1-203ENST00000505657 C16orf46Q6P387 395 aa7.43□□□□□ -1.22
CHD1-203ENST00000505657 LINC00114Q6XXX2 140 aa7.43□□□□□ -1.22
CHD1-203ENST00000505657 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
CHD1-203ENST00000505657 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
CHD1-203ENST00000505657 GJA3Q9Y6H8 435 aa7.43□□□□□ -1.22
CHD1-203ENST00000505657 ATXN7O15265 892 aaPredicted RBP7.42□□□□□ -1.22
CHD1-203ENST00000505657 MTMR3Q13615 1198 aa7.42□□□□□ -1.22
CHD1-203ENST00000505657 GRIN2CQ14957 1233 aa7.42□□□□□ -1.22
CHD1-203ENST00000505657 SAMD5Q5TGI4 173 aa7.42□□□□□ -1.22
CHD1-203ENST00000505657 STRN4Q9NRL3 753 aa7.42□□□□□ -1.22
CHD1-203ENST00000505657 DMGDHQ9UI17 866 aaKnown RBP7.42□□□□□ -1.22
CHD1-203ENST00000505657 PCDHGC4Q9Y5F7 938 aa7.42□□□□□ -1.22
CHD1-203ENST00000505657 KHNYNO15037 678 aaKnown RBP7.41□□□□□ -1.22
CHD1-203ENST00000505657 FAM157BP0CG42 384 aa7.41□□□□□ -1.22
CHD1-203ENST00000505657 HOXB4P17483 251 aaPredicted RBP7.41□□□□□ -1.22
CHD1-203ENST00000505657 TNP2Q05952 138 aa7.41□□□□□ -1.22
CHD1-203ENST00000505657 TYRO3Q06418 890 aa7.41□□□□□ -1.22
CHD1-203ENST00000505657 C11orf91Q3C1V1 193 aa7.41□□□□□ -1.22
CHD1-203ENST00000505657 ETFBKMTQ8IXQ9 262 aa7.41□□□□□ -1.22
CHD1-203ENST00000505657 GTF3C2Q8WUA4 911 aaPredicted RBP7.41□□□□□ -1.22
CHD1-203ENST00000505657 TRAIPQ9BWF2 469 aa7.41□□□□□ -1.22
CHD1-203ENST00000505657 GDF2Q9UK05 429 aaPredicted RBP7.41□□□□□ -1.22
CHD1-203ENST00000505657 C1QTNF9BB2RNN3 333 aa7.4□□□□□ -1.22
CHD1-203ENST00000505657 TGFBR3LH3BV60 316 aa7.4□□□□□ -1.22
CHD1-203ENST00000505657 EFSO43281 561 aa7.4□□□□□ -1.22
CHD1-203ENST00000505657 MAPTP10636 758 aaKnown RBP7.4□□□□□ -1.22
CHD1-203ENST00000505657 GRNP28799 593 aaKnown RBP7.4□□□□□ -1.22
CHD1-203ENST00000505657 SERPINB4P48594 390 aa7.4□□□□□ -1.22
CHD1-203ENST00000505657 ZNF211Q13398 564 aaPredicted RBP7.4□□□□□ -1.22
CHD1-203ENST00000505657 FIGNL1Q6PIW4 674 aa7.4□□□□□ -1.22
CHD1-203ENST00000505657 BTLAQ7Z6A9 289 aa7.4□□□□□ -1.22
CHD1-203ENST00000505657 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
CHD1-203ENST00000505657 ANO2Q9NQ90 1003 aa7.4□□□□□ -1.22
CHD1-203ENST00000505657 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.4□□□□□ -1.22
CHD1-203ENST00000505657 KRTAP9-6A0A140TA67 174 aa7.39□□□□□ -1.23
CHD1-203ENST00000505657 C2CD2LO14523 706 aa7.39□□□□□ -1.23
CHD1-203ENST00000505657 CD33P20138 364 aa7.39□□□□□ -1.23
CHD1-203ENST00000505657 CTBSQ01459 385 aa7.39□□□□□ -1.23
CHD1-203ENST00000505657 PDE4CQ08493 712 aa7.39□□□□□ -1.23
CHD1-203ENST00000505657 SFSWAPQ12872 951 aaKnown RBP7.39□□□□□ -1.23
CHD1-203ENST00000505657 B4GALNT3Q6L9W6 998 aa7.39□□□□□ -1.23
CHD1-203ENST00000505657 TXNDC2Q86VQ3 553 aa7.39□□□□□ -1.23
CHD1-203ENST00000505657 IFT43Q96FT9 208 aa7.39□□□□□ -1.23
CHD1-203ENST00000505657 CEP63Q96MT8 703 aa7.39□□□□□ -1.23
CHD1-203ENST00000505657 ATXN7L1Q9ULK2 861 aaPredicted RBP7.39□□□□□ -1.23
CHD1-203ENST00000505657 PHF24Q9UPV7 400 aa7.39□□□□□ -1.23
CHD1-203ENST00000505657 ZBTB39O15060 712 aa7.38□□□□□ -1.23
CHD1-203ENST00000505657 FGFR3P22607 806 aa7.38□□□□□ -1.23
CHD1-203ENST00000505657 AMPD1P23109 780 aa7.38□□□□□ -1.23
CHD1-203ENST00000505657 IER5Q5VY09 327 aa7.38□□□□□ -1.23
CHD1-203ENST00000505657 CD163Q86VB7 1156 aa7.38□□□□□ -1.23
CHD1-203ENST00000505657 GOLGA6L1Q8N7Z2 621 aa7.38□□□□□ -1.23
CHD1-203ENST00000505657 HELQQ8TDG4 1101 aa7.38□□□□□ -1.23
CHD1-203ENST00000505657 BRD7Q9NPI1 651 aa7.38□□□□□ -1.23
CHD1-203ENST00000505657 ANKIB1Q9P2G1 1089 aa7.38□□□□□ -1.23
CHD1-203ENST00000505657 USP20Q9Y2K6 914 aa7.38□□□□□ -1.23
CHD1-203ENST00000505657 MICAL2O94851 1124 aa7.37□□□□□ -1.23
CHD1-203ENST00000505657 BRD1O95696 1058 aa7.37□□□□□ -1.23
CHD1-203ENST00000505657 ABL1P00519 1130 aa7.37□□□□□ -1.23
CHD1-203ENST00000505657 ITGB7P26010 798 aa7.37□□□□□ -1.23
CHD1-203ENST00000505657 IDH3AP50213 366 aa7.37□□□□□ -1.23
CHD1-203ENST00000505657 TREML1Q86YW5 311 aa7.37□□□□□ -1.23
CHD1-203ENST00000505657 OPLAHO14841 1288 aa7.36□□□□□ -1.23
CHD1-203ENST00000505657 BMP4P12644 408 aa7.36□□□□□ -1.23
CHD1-203ENST00000505657 MPSTP25325 297 aa7.36□□□□□ -1.23
CHD1-203ENST00000505657 ARID4AP29374 1257 aaPredicted RBP7.36□□□□□ -1.23
CHD1-203ENST00000505657 INPP5BP32019 993 aa7.36□□□□□ -1.23
CHD1-203ENST00000505657 HIF1AQ16665 826 aa7.36□□□□□ -1.23
CHD1-203ENST00000505657 BTBD6Q96KE9 485 aa7.36□□□□□ -1.23
CHD1-203ENST00000505657 STIM2Q9P246 746 aa7.36□□□□□ -1.23
CHD1-203ENST00000505657 GGA1Q9UJY5 639 aa7.36□□□□□ -1.23
CHD1-203ENST00000505657 BRD2P25440 801 aaKnown RBP7.35□□□□□ -1.23
CHD1-203ENST00000505657 CHRNA4P43681 627 aa7.35□□□□□ -1.23
CHD1-203ENST00000505657 ATCAYQ86WG3 371 aa7.35□□□□□ -1.23
CHD1-203ENST00000505657 SLC30A3Q99726 388 aa7.35□□□□□ -1.23
CHD1-203ENST00000505657 GNB5O14775 395 aa7.34□□□□□ -1.23
CHD1-203ENST00000505657 PDIA4P13667 645 aaKnown RBP7.34□□□□□ -1.23
CHD1-203ENST00000505657 SLCO4C1Q6ZQN7 724 aa7.34□□□□□ -1.23
CHD1-203ENST00000505657 RAB44Q7Z6P3 723 aaPredicted RBP7.34□□□□□ -1.23
CHD1-203ENST00000505657 SEMA6BQ9H3T3 888 aa7.34□□□□□ -1.23
CHD1-203ENST00000505657 MARK1Q9P0L2 795 aa7.34□□□□□ -1.23
CHD1-203ENST00000505657 H3BRB1 525 aa7.33□□□□□ -1.24
CHD1-203ENST00000505657 ZAP70P43403 619 aa7.33□□□□□ -1.24
CHD1-203ENST00000505657 ARSDP51689 593 aa7.33□□□□□ -1.24
CHD1-203ENST00000505657 KCNQ4P56696 695 aa7.33□□□□□ -1.24
CHD1-203ENST00000505657 LAMC2Q13753 1193 aa7.33□□□□□ -1.24
CHD1-203ENST00000505657 DOC2BQ14184 412 aa7.33□□□□□ -1.24
CHD1-203ENST00000505657 ECM1Q16610 540 aa7.33□□□□□ -1.24
CHD1-203ENST00000505657 TUT1Q9H6E5 874 aaKnown RBP7.33□□□□□ -1.24
CHD1-203ENST00000505657 KCNH4Q9UQ05 1017 aa7.33□□□□□ -1.24
CHD1-203ENST00000505657 ICMTO60725 284 aa7.32□□□□□ -1.24
CHD1-203ENST00000505657 EPXP11678 715 aa7.32□□□□□ -1.24
CHD1-203ENST00000505657 NPR3P17342 541 aa7.32□□□□□ -1.24
CHD1-203ENST00000505657 FAM182BQ5T319 152 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms