RNA–Protein interactions for RNA: ENST00000504174.5

SSBP2-203, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-203ENST00000504174 RBM17Q96I25 401 aaKnown RBP30.22■■■□□ 2.43
SSBP2-203ENST00000504174 FZD9O00144 591 aa30.21■■■□□ 2.43
SSBP2-203ENST00000504174 HSPA1AP0DMV8 641 aaKnown RBP30.21■■■□□ 2.43
SSBP2-203ENST00000504174 HSPA1BP0DMV9 641 aaKnown RBP30.21■■■□□ 2.43
SSBP2-203ENST00000504174 HOXA10P31260 410 aaPredicted RBP30.21■■■□□ 2.43
SSBP2-203ENST00000504174 PARP10Q53GL7 1025 aa30.21■■■□□ 2.43
SSBP2-203ENST00000504174 EAPPQ56P03 285 aaPredicted RBP30.21■■■□□ 2.43
SSBP2-203ENST00000504174 BABAM1Q9NWV8 329 aa30.21■■■□□ 2.43
SSBP2-203ENST00000504174 EIF2S2P20042 333 aaKnown RBP30.2■■■□□ 2.43
SSBP2-203ENST00000504174 GPC2Q8N158 579 aa30.19■■■□□ 2.42
SSBP2-203ENST00000504174 CLEC11AQ9Y240 323 aa30.19■■■□□ 2.42
SSBP2-203ENST00000504174 NTSR2O95665 410 aa30.18■■■□□ 2.42
SSBP2-203ENST00000504174 EPHX2P34913 555 aa30.18■■■□□ 2.42
SSBP2-203ENST00000504174 PNMA8AQ86V59 439 aaPredicted RBP30.18■■■□□ 2.42
SSBP2-203ENST00000504174 CRAMP1Q96RY5 1269 aa30.18■■■□□ 2.42
SSBP2-203ENST00000504174 MKRN1Q9UHC7 482 aaKnown RBP30.18■■■□□ 2.42
SSBP2-203ENST00000504174 SNED1Q8TER0 1413 aa30.17■■■□□ 2.42
SSBP2-203ENST00000504174 TMX4Q9H1E5 349 aaPredicted RBP30.17■■■□□ 2.42
SSBP2-203ENST00000504174 PASKQ96RG2 1323 aa30.17■■■□□ 2.42
SSBP2-203ENST00000504174 TMPOP42166 694 aaKnown RBP30.16■■■□□ 2.42
SSBP2-203ENST00000504174 EIF6P56537 245 aaKnown RBP30.16■■■□□ 2.42
SSBP2-203ENST00000504174 NLRP3Q96P20 1036 aa30.16■■■□□ 2.42
SSBP2-203ENST00000504174 RNF123Q5XPI4 1314 aa30.16■■■□□ 2.42
SSBP2-203ENST00000504174 PPEF1O14829 653 aaPredicted RBP30.15■■■□□ 2.42
SSBP2-203ENST00000504174 TNS4Q8IZW8 715 aa30.15■■■□□ 2.42
SSBP2-203ENST00000504174 PDIA6Q15084 440 aa30.14■■■□□ 2.42
SSBP2-203ENST00000504174 UTP14AQ9BVJ6 771 aaKnown RBP30.14■■■□□ 2.42
SSBP2-203ENST00000504174 TMEM88BA6NKF7 163 aa30.12■■■□□ 2.41
SSBP2-203ENST00000504174 TCERG1O14776 1098 aaKnown RBP30.12■■■□□ 2.41
SSBP2-203ENST00000504174 LRP10Q7Z4F1 713 aa30.12■■■□□ 2.41
SSBP2-203ENST00000504174 LARGE2Q8N3Y3 721 aa30.12■■■□□ 2.41
SSBP2-203ENST00000504174 GJA3Q9Y6H8 435 aa30.12■■■□□ 2.41
SSBP2-203ENST00000504174 ADAMTSL1Q8N6G6 1762 aa30.12■■■□□ 2.41
SSBP2-203ENST00000504174 ITGBL1O95965 494 aaPredicted RBP30.11■■■□□ 2.41
SSBP2-203ENST00000504174 LMOD1P29536 600 aaPredicted RBP30.11■■■□□ 2.41
SSBP2-203ENST00000504174 HSP90AB3PQ58FF7 597 aa30.11■■■□□ 2.41
SSBP2-203ENST00000504174 CNTNAP1P78357 1384 aa30.11■■■□□ 2.41
SSBP2-203ENST00000504174 PROSER3Q2NL68 480 aa30.1■■■□□ 2.41
SSBP2-203ENST00000504174 MYBBP1AQ9BQG0 1328 aaKnown RBP30.1■■■□□ 2.41
SSBP2-203ENST00000504174 ANKRD36CQ5JPF3 1778 aa30.1■■■□□ 2.41
SSBP2-203ENST00000504174 ANXA1P04083 346 aa30.09■■■□□ 2.41
SSBP2-203ENST00000504174 NEUROD2Q15784 382 aa30.09■■■□□ 2.41
SSBP2-203ENST00000504174 SLC10A5Q5PT55 438 aa30.09■■■□□ 2.41
SSBP2-203ENST00000504174 C3orf67Q6ZVT6 689 aa30.09■■■□□ 2.41
SSBP2-203ENST00000504174 COPS6Q7L5N1 327 aa30.08■■■□□ 2.41
SSBP2-203ENST00000504174 NECTIN2Q92692 538 aa30.08■■■□□ 2.41
SSBP2-203ENST00000504174 PCNTO95613 3336 aa30.07■■■□□ 2.41
SSBP2-203ENST00000504174 AIMP1Q12904 312 aaKnown RBP30.07■■■□□ 2.4
SSBP2-203ENST00000504174 NIM1KQ8IY84 436 aa30.07■■■□□ 2.4
SSBP2-203ENST00000504174 CNTROBQ8N137 903 aa30.07■■■□□ 2.4
SSBP2-203ENST00000504174 COL4A5P29400 1685 aa30.07■■■□□ 2.4
SSBP2-203ENST00000504174 WDR43Q15061 677 aaKnown RBP eCLIP30.06■■■□□ 2.4
SSBP2-203ENST00000504174 MAP1SQ66K74 1059 aaPredicted RBP30.06■■■□□ 2.4
SSBP2-203ENST00000504174 CCDC146Q8IYE0 955 aa30.06■■■□□ 2.4
SSBP2-203ENST00000504174 XAGE3Q8WTP9 111 aa30.06■■■□□ 2.4
SSBP2-203ENST00000504174 ATP6V0A2Q9Y487 856 aa30.06■■■□□ 2.4
SSBP2-203ENST00000504174 DDX10Q13206 875 aaKnown RBP30.05■■■□□ 2.4
SSBP2-203ENST00000504174 RUNDC1Q96C34 613 aa30.05■■■□□ 2.4
SSBP2-203ENST00000504174 VPS33BQ9H267 617 aa30.05■■■□□ 2.4
SSBP2-203ENST00000504174 LAS1LQ9Y4W2 734 aaKnown RBP30.05■■■□□ 2.4
SSBP2-203ENST00000504174 PPIP5K2O43314 1243 aa30.04■■■□□ 2.4
SSBP2-203ENST00000504174 SUPT20HQ8NEM7 779 aa30.04■■■□□ 2.4
SSBP2-203ENST00000504174 DDX21Q9NR30 783 aaKnown RBP eCLIP30.04■■■□□ 2.4
SSBP2-203ENST00000504174 ABCC4O15439 1325 aa30.03■■■□□ 2.4
SSBP2-203ENST00000504174 CHL1O00533 1208 aa30.03■■■□□ 2.4
SSBP2-203ENST00000504174 CAPN15O75808 1086 aa30.03■■■□□ 2.4
SSBP2-203ENST00000504174 NLRP10Q86W26 655 aa30.03■■■□□ 2.4
SSBP2-203ENST00000504174 TCIRG1Q13488 830 aa30.02■■■□□ 2.4
SSBP2-203ENST00000504174 TRMT112Q9UI30 125 aaKnown RBP30.02■■■□□ 2.4
SSBP2-203ENST00000504174 LAMB2P55268 1798 aa30.02■■■□□ 2.4
SSBP2-203ENST00000504174 BBOX1O75936 387 aa30.01■■■□□ 2.39
SSBP2-203ENST00000504174 AOC3Q16853 763 aa30.01■■■□□ 2.39
SSBP2-203ENST00000504174 SLC51AQ86UW1 340 aa30.01■■■□□ 2.39
SSBP2-203ENST00000504174 VEGFBP49765 207 aa30■■■□□ 2.39
SSBP2-203ENST00000504174 DDX46Q7L014 1031 aaKnown RBP30■■■□□ 2.39
SSBP2-203ENST00000504174 AIDAQ96BJ3 306 aa30■■■□□ 2.39
SSBP2-203ENST00000504174 LTBP1Q14766 1721 aa29.99■■■□□ 2.39
SSBP2-203ENST00000504174 SH3TC1Q8TE82 1336 aa29.99■■■□□ 2.39
SSBP2-203ENST00000504174 HCLS1P14317 486 aaPredicted RBP29.99■■■□□ 2.39
SSBP2-203ENST00000504174 EPS15P42566 896 aa29.99■■■□□ 2.39
SSBP2-203ENST00000504174 SCNN1DP51172 638 aa29.99■■■□□ 2.39
SSBP2-203ENST00000504174 DPP8Q6V1X1 898 aaPredicted RBP29.99■■■□□ 2.39
SSBP2-203ENST00000504174 KRT24Q2M2I5 525 aa29.98■■■□□ 2.39
SSBP2-203ENST00000504174 DEFB115Q30KQ5 88 aa29.98■■■□□ 2.39
SSBP2-203ENST00000504174 USP50Q70EL3 339 aaPredicted RBP29.98■■■□□ 2.39
SSBP2-203ENST00000504174 SP8Q8IXZ3 490 aa29.98■■■□□ 2.39
SSBP2-203ENST00000504174 TRIM35Q9UPQ4 493 aa29.98■■■□□ 2.39
SSBP2-203ENST00000504174 HOXB7P09629 217 aa29.97■■■□□ 2.39
SSBP2-203ENST00000504174 HDGFL1Q5TGJ6 251 aa29.97■■■□□ 2.39
SSBP2-203ENST00000504174 MPNDQ8N594 471 aa29.97■■■□□ 2.39
SSBP2-203ENST00000504174 RTFDC1Q9BY42 306 aaPredicted RBP29.97■■■□□ 2.39
SSBP2-203ENST00000504174 CHPF2Q9P2E5 772 aa29.97■■■□□ 2.39
SSBP2-203ENST00000504174 ZNRF3Q9ULT6 936 aa29.97■■■□□ 2.39
SSBP2-203ENST00000504174 ABT1Q9ULW3 272 aaKnown RBP29.97■■■□□ 2.39
SSBP2-203ENST00000504174 RASSF10A6NK89 507 aa29.95■■■□□ 2.39
SSBP2-203ENST00000504174 FOXN1O15353 648 aa29.95■■■□□ 2.39
SSBP2-203ENST00000504174 GRAPQ13588 217 aa29.95■■■□□ 2.39
SSBP2-203ENST00000504174 PLBD2Q8NHP8 589 aa29.95■■■□□ 2.39
SSBP2-203ENST00000504174 GRAPLQ8TC17 118 aaPredicted RBP29.95■■■□□ 2.39
SSBP2-203ENST00000504174 DBF4Q9UBU7 674 aaPredicted RBP29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms