RNA–Protein interactions for RNA: ENST00000502775.1

LINC00955-201, long intergenic non-protein coding RNA 955, humanhuman

TSL 1 (best)

Gene LINC00955, Length 856 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00955-201ENST00000502775 GPC2Q8N158 579 aa16.92■□□□□ 0.3
LINC00955-201ENST00000502775 RBM17Q96I25 401 aaKnown RBP16.92■□□□□ 0.3
LINC00955-201ENST00000502775 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
LINC00955-201ENST00000502775 SNED1Q8TER0 1413 aa16.91■□□□□ 0.3
LINC00955-201ENST00000502775 TMEM88BA6NKF7 163 aa16.91■□□□□ 0.3
LINC00955-201ENST00000502775 GPTP24298 496 aa16.91■□□□□ 0.3
LINC00955-201ENST00000502775 HOXA10P31260 410 aaPredicted RBP16.91■□□□□ 0.3
LINC00955-201ENST00000502775 PARP10Q53GL7 1025 aa16.91■□□□□ 0.3
LINC00955-201ENST00000502775 GIGYF2Q6Y7W6 1299 aaKnown RBP16.91■□□□□ 0.3
LINC00955-201ENST00000502775 TTLL7Q6ZT98 887 aa16.91■□□□□ 0.3
LINC00955-201ENST00000502775 TMX4Q9H1E5 349 aaPredicted RBP16.91■□□□□ 0.3
LINC00955-201ENST00000502775 ZBTB3Q9H5J0 574 aa16.91■□□□□ 0.3
LINC00955-201ENST00000502775 TSPYL4Q9UJ04 414 aa16.91■□□□□ 0.3
LINC00955-201ENST00000502775 LMOD1P29536 600 aaPredicted RBP16.9■□□□□ 0.3
LINC00955-201ENST00000502775 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
LINC00955-201ENST00000502775 CRAMP1Q96RY5 1269 aa16.9■□□□□ 0.3
LINC00955-201ENST00000502775 THUMPD2Q9BTF0 503 aaKnown RBP16.9■□□□□ 0.3
LINC00955-201ENST00000502775 RNF123Q5XPI4 1314 aa16.9■□□□□ 0.3
LINC00955-201ENST00000502775 UBN2Q6ZU65 1347 aa16.9■□□□□ 0.3
LINC00955-201ENST00000502775 SUSD4Q5VX71 490 aa16.89■□□□□ 0.29
LINC00955-201ENST00000502775 ZNF34Q8IZ26 560 aa16.89■□□□□ 0.29
LINC00955-201ENST00000502775 AIDAQ96BJ3 306 aa16.89■□□□□ 0.29
LINC00955-201ENST00000502775 BABAM1Q9NWV8 329 aa16.89■□□□□ 0.29
LINC00955-201ENST00000502775 PPEF1O14829 653 aaPredicted RBP16.88■□□□□ 0.29
LINC00955-201ENST00000502775 CAPN15O75808 1086 aa16.88■□□□□ 0.29
LINC00955-201ENST00000502775 NTSR2O95665 410 aa16.88■□□□□ 0.29
LINC00955-201ENST00000502775 LARGE2Q8N3Y3 721 aa16.88■□□□□ 0.29
LINC00955-201ENST00000502775 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
LINC00955-201ENST00000502775 ITGBL1O95965 494 aaPredicted RBP16.87■□□□□ 0.29
LINC00955-201ENST00000502775 NLRP3Q96P20 1036 aa16.87■□□□□ 0.29
LINC00955-201ENST00000502775 HSP90AB3PQ58FF7 597 aa16.86■□□□□ 0.29
LINC00955-201ENST00000502775 NIM1KQ8IY84 436 aa16.86■□□□□ 0.29
LINC00955-201ENST00000502775 CNTROBQ8N137 903 aa16.86■□□□□ 0.29
LINC00955-201ENST00000502775 UTP14AQ9BVJ6 771 aaKnown RBP16.86■□□□□ 0.29
LINC00955-201ENST00000502775 VPS33BQ9H267 617 aa16.86■□□□□ 0.29
LINC00955-201ENST00000502775 GJA3Q9Y6H8 435 aa16.86■□□□□ 0.29
LINC00955-201ENST00000502775 EIF2S2P20042 333 aaKnown RBP16.85■□□□□ 0.29
LINC00955-201ENST00000502775 RIPK4P57078 832 aa16.85■□□□□ 0.29
LINC00955-201ENST00000502775 RALBP1Q15311 655 aa16.85■□□□□ 0.29
LINC00955-201ENST00000502775 SUPT20HQ8NEM7 779 aa16.85■□□□□ 0.29
LINC00955-201ENST00000502775 MAP1SQ66K74 1059 aaPredicted RBP16.84■□□□□ 0.29
LINC00955-201ENST00000502775 PRDM10Q9NQV6 1147 aa16.84■□□□□ 0.29
LINC00955-201ENST00000502775 RASSF10A6NK89 507 aa16.83■□□□□ 0.28
LINC00955-201ENST00000502775 FOXN1O15353 648 aa16.83■□□□□ 0.28
LINC00955-201ENST00000502775 PPIP5K2O43314 1243 aa16.83■□□□□ 0.28
LINC00955-201ENST00000502775 COL4A5P29400 1685 aa16.83■□□□□ 0.28
LINC00955-201ENST00000502775 CTCFP49711 727 aaPredicted RBP16.83■□□□□ 0.28
LINC00955-201ENST00000502775 VEGFBP49765 207 aa16.83■□□□□ 0.28
LINC00955-201ENST00000502775 TRPM7Q96QT4 1865 aa16.82■□□□□ 0.28
LINC00955-201ENST00000502775 TMPOP42166 694 aaKnown RBP16.82■□□□□ 0.28
LINC00955-201ENST00000502775 DEFB115Q30KQ5 88 aa16.82■□□□□ 0.28
LINC00955-201ENST00000502775 SLC10A5Q5PT55 438 aa16.82■□□□□ 0.28
LINC00955-201ENST00000502775 USP50Q70EL3 339 aaPredicted RBP16.82■□□□□ 0.28
LINC00955-201ENST00000502775 LRP10Q7Z4F1 713 aa16.82■□□□□ 0.28
LINC00955-201ENST00000502775 ABT1Q9ULW3 272 aaKnown RBP16.82■□□□□ 0.28
LINC00955-201ENST00000502775 ATP6V0A2Q9Y487 856 aa16.82■□□□□ 0.28
LINC00955-201ENST00000502775 LAMB2P55268 1798 aa16.82■□□□□ 0.28
LINC00955-201ENST00000502775 LTBP1Q14766 1721 aa16.82■□□□□ 0.28
LINC00955-201ENST00000502775 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
LINC00955-201ENST00000502775 SCNN1DP51172 638 aa16.81■□□□□ 0.28
LINC00955-201ENST00000502775 PDIA6Q15084 440 aa16.81■□□□□ 0.28
LINC00955-201ENST00000502775 ABCC4O15439 1325 aa16.8■□□□□ 0.28
LINC00955-201ENST00000502775 BBOX1O75936 387 aa16.8■□□□□ 0.28
LINC00955-201ENST00000502775 MAP2K1Q02750 393 aaPredicted RBP16.8■□□□□ 0.28
LINC00955-201ENST00000502775 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00955-201ENST00000502775 EPS15P42566 896 aa16.79■□□□□ 0.28
LINC00955-201ENST00000502775 AOC3Q16853 763 aa16.79■□□□□ 0.28
LINC00955-201ENST00000502775 PROSER3Q2NL68 480 aa16.79■□□□□ 0.28
LINC00955-201ENST00000502775 DPP8Q6V1X1 898 aaPredicted RBP16.79■□□□□ 0.28
LINC00955-201ENST00000502775 C3orf67Q6ZVT6 689 aa16.79■□□□□ 0.28
LINC00955-201ENST00000502775 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
LINC00955-201ENST00000502775 COPS6Q7L5N1 327 aa16.79■□□□□ 0.28
LINC00955-201ENST00000502775 WBP1LQ9NX94 342 aa16.79■□□□□ 0.28
LINC00955-201ENST00000502775 SH3TC1Q8TE82 1336 aa16.78■□□□□ 0.28
LINC00955-201ENST00000502775 CDHR2Q9BYE9 1310 aa16.78■□□□□ 0.28
LINC00955-201ENST00000502775 WDR33Q9C0J8 1336 aaKnown RBP16.78■□□□□ 0.28
LINC00955-201ENST00000502775 ANXA1P04083 346 aa16.78■□□□□ 0.28
LINC00955-201ENST00000502775 ECE1P42892 770 aa16.78■□□□□ 0.28
LINC00955-201ENST00000502775 AIMP1Q12904 312 aaKnown RBP16.78■□□□□ 0.28
LINC00955-201ENST00000502775 TMC4Q7Z404 712 aa16.78■□□□□ 0.28
LINC00955-201ENST00000502775 NLRP10Q86W26 655 aa16.78■□□□□ 0.28
LINC00955-201ENST00000502775 SP8Q8IXZ3 490 aa16.78■□□□□ 0.28
LINC00955-201ENST00000502775 XAGE3Q8WTP9 111 aa16.78■□□□□ 0.28
LINC00955-201ENST00000502775 RTFDC1Q9BY42 306 aaPredicted RBP16.78■□□□□ 0.28
LINC00955-201ENST00000502775 ADARB2Q9NS39 739 aaKnown RBP16.78■□□□□ 0.28
LINC00955-201ENST00000502775 TRMT112Q9UI30 125 aaKnown RBP16.78■□□□□ 0.28
LINC00955-201ENST00000502775 ZNRF3Q9ULT6 936 aa16.78■□□□□ 0.28
LINC00955-201ENST00000502775 PCNTO95613 3336 aa16.77■□□□□ 0.28
LINC00955-201ENST00000502775 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.28
LINC00955-201ENST00000502775 TCIRG1Q13488 830 aa16.77■□□□□ 0.28
LINC00955-201ENST00000502775 MPNDQ8N594 471 aa16.77■□□□□ 0.28
LINC00955-201ENST00000502775 GPRC5DQ9NZD1 345 aa16.77■□□□□ 0.28
LINC00955-201ENST00000502775 THSD7BQ9C0I4 1608 aa16.77■□□□□ 0.27
LINC00955-201ENST00000502775 HOXB7P09629 217 aa16.76■□□□□ 0.27
LINC00955-201ENST00000502775 GRAPQ13588 217 aa16.76■□□□□ 0.27
LINC00955-201ENST00000502775 WDR43Q15061 677 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC00955-201ENST00000502775 PAXIP1Q6ZW49 1069 aaPredicted RBP16.76■□□□□ 0.27
LINC00955-201ENST00000502775 GRAPLQ8TC17 118 aaPredicted RBP16.76■□□□□ 0.27
LINC00955-201ENST00000502775 NECTIN2Q92692 538 aa16.76■□□□□ 0.27
LINC00955-201ENST00000502775 CHL1O00533 1208 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms