RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 RIC1Q4ADV7 1423 aa23.92■■□□□ 1.42
ATPAF2-209ENST00000497871 CACNA1SQ13698 1873 aa23.92■■□□□ 1.42
ATPAF2-209ENST00000497871 ZNF541Q9H0D2 1346 aa23.91■■□□□ 1.42
ATPAF2-209ENST00000497871 NTSR2O95665 410 aa23.91■■□□□ 1.42
ATPAF2-209ENST00000497871 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
ATPAF2-209ENST00000497871 RBM17Q96I25 401 aaKnown RBP23.91■■□□□ 1.42
ATPAF2-209ENST00000497871 CREBZFQ9NS37 354 aa23.91■■□□□ 1.42
ATPAF2-209ENST00000497871 JDP2Q8WYK2 163 aa23.9■■□□□ 1.42
ATPAF2-209ENST00000497871 HACL1Q9UJ83 578 aa23.9■■□□□ 1.42
ATPAF2-209ENST00000497871 MYBBP1AQ9BQG0 1328 aaKnown RBP23.89■■□□□ 1.42
ATPAF2-209ENST00000497871 SLC10A5Q5PT55 438 aa23.89■■□□□ 1.41
ATPAF2-209ENST00000497871 NLRP3Q96P20 1036 aa23.89■■□□□ 1.41
ATPAF2-209ENST00000497871 SNED1Q8TER0 1413 aa23.89■■□□□ 1.41
ATPAF2-209ENST00000497871 NUP98P52948 1817 aa23.89■■□□□ 1.41
ATPAF2-209ENST00000497871 PCNTO95613 3336 aa23.89■■□□□ 1.41
ATPAF2-209ENST00000497871 PROSER3Q2NL68 480 aa23.88■■□□□ 1.41
ATPAF2-209ENST00000497871 GPC2Q8N158 579 aa23.88■■□□□ 1.41
ATPAF2-209ENST00000497871 UTP14AQ9BVJ6 771 aaKnown RBP23.88■■□□□ 1.41
ATPAF2-209ENST00000497871 NEUROD2Q15784 382 aa23.87■■□□□ 1.41
ATPAF2-209ENST00000497871 COL13A1Q5TAT6 717 aaPredicted RBP23.87■■□□□ 1.41
ATPAF2-209ENST00000497871 PASKQ96RG2 1323 aa23.86■■□□□ 1.41
ATPAF2-209ENST00000497871 CHL1O00533 1208 aa23.86■■□□□ 1.41
ATPAF2-209ENST00000497871 ANXA1P04083 346 aa23.86■■□□□ 1.41
ATPAF2-209ENST00000497871 EPHX2P34913 555 aa23.86■■□□□ 1.41
ATPAF2-209ENST00000497871 EAPPQ56P03 285 aaPredicted RBP23.86■■□□□ 1.41
ATPAF2-209ENST00000497871 HSP90AB3PQ58FF7 597 aa23.86■■□□□ 1.41
ATPAF2-209ENST00000497871 C3orf67Q6ZVT6 689 aa23.86■■□□□ 1.41
ATPAF2-209ENST00000497871 COPS6Q7L5N1 327 aa23.86■■□□□ 1.41
ATPAF2-209ENST00000497871 PNMA8AQ86V59 439 aaPredicted RBP23.86■■□□□ 1.41
ATPAF2-209ENST00000497871 RUNDC1Q96C34 613 aa23.86■■□□□ 1.41
ATPAF2-209ENST00000497871 PPEF1O14829 653 aaPredicted RBP23.85■■□□□ 1.41
ATPAF2-209ENST00000497871 CCDC146Q8IYE0 955 aa23.85■■□□□ 1.41
ATPAF2-209ENST00000497871 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
ATPAF2-209ENST00000497871 ITGBL1O95965 494 aaPredicted RBP23.84■■□□□ 1.41
ATPAF2-209ENST00000497871 EIF6P56537 245 aaKnown RBP23.84■■□□□ 1.41
ATPAF2-209ENST00000497871 TMX4Q9H1E5 349 aaPredicted RBP23.84■■□□□ 1.41
ATPAF2-209ENST00000497871 DDX21Q9NR30 783 aaKnown RBP eCLIP23.84■■□□□ 1.41
ATPAF2-209ENST00000497871 CLEC11AQ9Y240 323 aa23.84■■□□□ 1.41
ATPAF2-209ENST00000497871 SCN4AP35499 1836 aa23.84■■□□□ 1.41
ATPAF2-209ENST00000497871 TCERG1O14776 1098 aaKnown RBP23.83■■□□□ 1.41
ATPAF2-209ENST00000497871 HSPA1AP0DMV8 641 aaKnown RBP23.83■■□□□ 1.41
ATPAF2-209ENST00000497871 HSPA1BP0DMV9 641 aaKnown RBP23.83■■□□□ 1.41
ATPAF2-209ENST00000497871 AIMP1Q12904 312 aaKnown RBP23.83■■□□□ 1.41
ATPAF2-209ENST00000497871 WDR43Q15061 677 aaKnown RBP eCLIP23.83■■□□□ 1.41
ATPAF2-209ENST00000497871 LARGE2Q8N3Y3 721 aa23.83■■□□□ 1.41
ATPAF2-209ENST00000497871 XAGE3Q8WTP9 111 aa23.83■■□□□ 1.41
ATPAF2-209ENST00000497871 NECTIN2Q92692 538 aa23.83■■□□□ 1.41
ATPAF2-209ENST00000497871 TRIM35Q9UPQ4 493 aa23.83■■□□□ 1.41
ATPAF2-209ENST00000497871 MKRN1Q9UHC7 482 aaKnown RBP23.82■■□□□ 1.4
ATPAF2-209ENST00000497871 TCIRG1Q13488 830 aa23.81■■□□□ 1.4
ATPAF2-209ENST00000497871 NLRP10Q86W26 655 aa23.81■■□□□ 1.4
ATPAF2-209ENST00000497871 VPS33BQ9H267 617 aa23.81■■□□□ 1.4
ATPAF2-209ENST00000497871 ADAMTS8Q9UP79 889 aa23.81■■□□□ 1.4
ATPAF2-209ENST00000497871 ATP6V0A2Q9Y487 856 aa23.81■■□□□ 1.4
ATPAF2-209ENST00000497871 LAS1LQ9Y4W2 734 aaKnown RBP23.81■■□□□ 1.4
ATPAF2-209ENST00000497871 BBOX1O75936 387 aa23.8■■□□□ 1.4
ATPAF2-209ENST00000497871 KRT24Q2M2I5 525 aa23.8■■□□□ 1.4
ATPAF2-209ENST00000497871 GJA3Q9Y6H8 435 aa23.8■■□□□ 1.4
ATPAF2-209ENST00000497871 TMEM88BA6NKF7 163 aa23.79■■□□□ 1.4
ATPAF2-209ENST00000497871 CNTROBQ8N137 903 aa23.79■■□□□ 1.4
ATPAF2-209ENST00000497871 HOXB7P09629 217 aa23.78■■□□□ 1.4
ATPAF2-209ENST00000497871 SLC51AQ86UW1 340 aa23.78■■□□□ 1.4
ATPAF2-209ENST00000497871 TRMT112Q9UI30 125 aaKnown RBP23.78■■□□□ 1.4
ATPAF2-209ENST00000497871 ABCC4O15439 1325 aa23.78■■□□□ 1.4
ATPAF2-209ENST00000497871 HCLS1P14317 486 aaPredicted RBP23.77■■□□□ 1.4
ATPAF2-209ENST00000497871 LMOD1P29536 600 aaPredicted RBP23.77■■□□□ 1.4
ATPAF2-209ENST00000497871 SP8Q8IXZ3 490 aa23.77■■□□□ 1.4
ATPAF2-209ENST00000497871 NIM1KQ8IY84 436 aa23.77■■□□□ 1.4
ATPAF2-209ENST00000497871 CHPF2Q9P2E5 772 aa23.77■■□□□ 1.4
ATPAF2-209ENST00000497871 SH3TC1Q8TE82 1336 aa23.77■■□□□ 1.4
ATPAF2-209ENST00000497871 CNTNAP1P78357 1384 aa23.77■■□□□ 1.4
ATPAF2-209ENST00000497871 PPIP5K2O43314 1243 aa23.76■■□□□ 1.39
ATPAF2-209ENST00000497871 HDGFL1Q5TGJ6 251 aa23.76■■□□□ 1.39
ATPAF2-209ENST00000497871 MAP1SQ66K74 1059 aaPredicted RBP23.76■■□□□ 1.39
ATPAF2-209ENST00000497871 SUPT20HQ8NEM7 779 aa23.76■■□□□ 1.39
ATPAF2-209ENST00000497871 CFAP44Q96MT7 982 aa23.76■■□□□ 1.39
ATPAF2-209ENST00000497871 RTFDC1Q9BY42 306 aaPredicted RBP23.76■■□□□ 1.39
ATPAF2-209ENST00000497871 SCNN1DP51172 638 aa23.75■■□□□ 1.39
ATPAF2-209ENST00000497871 ANKRD13DQ6ZTN6 518 aa23.75■■□□□ 1.39
ATPAF2-209ENST00000497871 DDX46Q7L014 1031 aaKnown RBP23.75■■□□□ 1.39
ATPAF2-209ENST00000497871 TNS4Q8IZW8 715 aa23.75■■□□□ 1.39
ATPAF2-209ENST00000497871 PLBD2Q8NHP8 589 aa23.75■■□□□ 1.39
ATPAF2-209ENST00000497871 DBF4Q9UBU7 674 aaPredicted RBP23.75■■□□□ 1.39
ATPAF2-209ENST00000497871 COL4A5P29400 1685 aa23.75■■□□□ 1.39
ATPAF2-209ENST00000497871 EPS15P42566 896 aa23.74■■□□□ 1.39
ATPAF2-209ENST00000497871 AOC3Q16853 763 aa23.74■■□□□ 1.39
ATPAF2-209ENST00000497871 DPP8Q6V1X1 898 aaPredicted RBP23.73■■□□□ 1.39
ATPAF2-209ENST00000497871 MPNDQ8N594 471 aa23.73■■□□□ 1.39
ATPAF2-209ENST00000497871 PRKRIP1Q9H875 184 aaPredicted RBP23.73■■□□□ 1.39
ATPAF2-209ENST00000497871 ZNRF3Q9ULT6 936 aa23.73■■□□□ 1.39
ATPAF2-209ENST00000497871 GRAPQ13588 217 aa23.72■■□□□ 1.39
ATPAF2-209ENST00000497871 USP50Q70EL3 339 aaPredicted RBP23.72■■□□□ 1.39
ATPAF2-209ENST00000497871 GRAPLQ8TC17 118 aaPredicted RBP23.72■■□□□ 1.39
ATPAF2-209ENST00000497871 HYPKQ9NX55 129 aa23.72■■□□□ 1.39
ATPAF2-209ENST00000497871 ADAMTSL1Q8N6G6 1762 aa23.71■■□□□ 1.39
ATPAF2-209ENST00000497871 VEGFBP49765 207 aa23.71■■□□□ 1.39
ATPAF2-209ENST00000497871 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
ATPAF2-209ENST00000497871 ISCA1Q9BUE6 129 aa23.71■■□□□ 1.39
ATPAF2-209ENST00000497871 CXCL9Q07325 125 aa23.7■■□□□ 1.38
ATPAF2-209ENST00000497871 TMC4Q7Z404 712 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms