RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 CRB1P82279 1406 aa8.96□□□□□ -0.98
HOXA9-206ENST00000497089 EDC4Q6P2E9 1401 aaKnown RBP8.96□□□□□ -0.98
HOXA9-206ENST00000497089 PARP4Q9UKK3 1724 aaKnown RBP8.96□□□□□ -0.98
HOXA9-206ENST00000497089 GGCXP38435 758 aa8.96□□□□□ -0.98
HOXA9-206ENST00000497089 EVA1CP58658 441 aa8.96□□□□□ -0.98
HOXA9-206ENST00000497089 LYPD8Q6UX82 237 aa8.96□□□□□ -0.98
HOXA9-206ENST00000497089 ARHGEF25Q86VW2 580 aa8.96□□□□□ -0.98
HOXA9-206ENST00000497089 TCP11L2Q8N4U5 519 aa8.96□□□□□ -0.98
HOXA9-206ENST00000497089 SLC12A5Q9H2X9 1139 aa8.96□□□□□ -0.98
HOXA9-206ENST00000497089 STRN4Q9NRL3 753 aa8.96□□□□□ -0.98
HOXA9-206ENST00000497089 TERF2IPQ9NYB0 399 aa8.96□□□□□ -0.98
HOXA9-206ENST00000497089 DISP2A7MBM2 1401 aa8.95□□□□□ -0.98
HOXA9-206ENST00000497089 RGPD1P0DJD0 1748 aa8.95□□□□□ -0.98
HOXA9-206ENST00000497089 A0A1W2PP64 1363 aa8.95□□□□□ -0.98
HOXA9-206ENST00000497089 USP47Q96K76 1375 aa8.95□□□□□ -0.98
HOXA9-206ENST00000497089 PTPRNQ16849 979 aa8.95□□□□□ -0.98
HOXA9-206ENST00000497089 C1orf115Q9H7X2 142 aa8.95□□□□□ -0.98
HOXA9-206ENST00000497089 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.95□□□□□ -0.98
HOXA9-206ENST00000497089 WDR17Q8IZU2 1322 aa8.94□□□□□ -0.98
HOXA9-206ENST00000497089 A0A0G2JS52 829 aa8.94□□□□□ -0.98
HOXA9-206ENST00000497089 RNF223E7ERA6 249 aa8.94□□□□□ -0.98
HOXA9-206ENST00000497089 HDGFL2Q7Z4V5 671 aaPredicted RBP8.94□□□□□ -0.98
HOXA9-206ENST00000497089 LRRN4Q8WUT4 740 aa8.94□□□□□ -0.98
HOXA9-206ENST00000497089 TBC1D2BQ9UPU7 963 aa8.94□□□□□ -0.98
HOXA9-206ENST00000497089 RGPD5Q99666 1765 aa8.94□□□□□ -0.98
HOXA9-206ENST00000497089 TNS1Q9HBL0 1735 aaKnown RBP8.94□□□□□ -0.98
HOXA9-206ENST00000497089 OVOS2A0A0J9YW53 1432 aa8.94□□□□□ -0.98
HOXA9-206ENST00000497089 OVOS2Q6IE36 1432 aa8.94□□□□□ -0.98
HOXA9-206ENST00000497089 FANCIQ9NVI1 1328 aa8.93□□□□□ -0.98
HOXA9-206ENST00000497089 PPEF1O14829 653 aaPredicted RBP8.93□□□□□ -0.98
HOXA9-206ENST00000497089 PER1O15534 1290 aaPredicted RBP8.93□□□□□ -0.98
HOXA9-206ENST00000497089 SF3B2Q13435 895 aaKnown RBP8.93□□□□□ -0.98
HOXA9-206ENST00000497089 FAM196AQ6ZSG2 479 aa8.93□□□□□ -0.98
HOXA9-206ENST00000497089 TMC1Q8TDI8 760 aa8.93□□□□□ -0.98
HOXA9-206ENST00000497089 WNK3Q9BYP7 1800 aa8.93□□□□□ -0.98
HOXA9-206ENST00000497089 C11orf95C9JLR9 678 aaPredicted RBP8.92□□□□□ -0.98
HOXA9-206ENST00000497089 DEFB132Q7Z7B7 95 aa8.92□□□□□ -0.98
HOXA9-206ENST00000497089 NME9Q86XW9 330 aa8.92□□□□□ -0.98
HOXA9-206ENST00000497089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.92□□□□□ -0.98
HOXA9-206ENST00000497089 ANKLE1Q8NAG6 615 aa8.92□□□□□ -0.98
HOXA9-206ENST00000497089 NUDT12Q9BQG2 462 aa8.92□□□□□ -0.98
HOXA9-206ENST00000497089 HMX1Q9NP08 348 aaPredicted RBP8.92□□□□□ -0.98
HOXA9-206ENST00000497089 USP35Q9P2H5 1018 aa8.92□□□□□ -0.98
HOXA9-206ENST00000497089 FCF1Q9Y324 198 aaKnown RBP8.92□□□□□ -0.98
HOXA9-206ENST00000497089 LRRC37A3O60309 1634 aa8.92□□□□□ -0.98
HOXA9-206ENST00000497089 LTN1O94822 1766 aa8.92□□□□□ -0.98
HOXA9-206ENST00000497089 PEAK1Q9H792 1746 aa8.92□□□□□ -0.98
HOXA9-206ENST00000497089 ANKRD36BQ8N2N9 1353 aa8.92□□□□□ -0.98
HOXA9-206ENST00000497089 CCNYL3P0C7X3 344 aa8.91□□□□□ -0.98
HOXA9-206ENST00000497089 BAG6P46379 1132 aa8.91□□□□□ -0.98
HOXA9-206ENST00000497089 TMF1P82094 1093 aa8.91□□□□□ -0.98
HOXA9-206ENST00000497089 PDE3BQ13370 1112 aa8.91□□□□□ -0.98
HOXA9-206ENST00000497089 FAM182BQ5T319 152 aa8.91□□□□□ -0.98
HOXA9-206ENST00000497089 PNMA1Q8ND90 353 aa8.91□□□□□ -0.98
HOXA9-206ENST00000497089 CCDC97Q96F63 343 aaPredicted RBP8.91□□□□□ -0.98
HOXA9-206ENST00000497089 PODXL2Q9NZ53 605 aa8.91□□□□□ -0.98
HOXA9-206ENST00000497089 BCL9O00512 1426 aa8.9□□□□□ -0.98
HOXA9-206ENST00000497089 CDCA8Q53HL2 280 aa8.9□□□□□ -0.98
HOXA9-206ENST00000497089 TOM1L2Q6ZVM7 507 aa8.9□□□□□ -0.98
HOXA9-206ENST00000497089 CCDC82Q8N4S0 544 aa8.9□□□□□ -0.98
HOXA9-206ENST00000497089 CDCA7Q9BWT1 371 aaPredicted RBP8.9□□□□□ -0.98
HOXA9-206ENST00000497089 CARD10Q9BWT7 1032 aa8.9□□□□□ -0.98
HOXA9-206ENST00000497089 EVA1BQ9NVM1 165 aa8.9□□□□□ -0.98
HOXA9-206ENST00000497089 RBM19Q9Y4C8 960 aaKnown RBP8.9□□□□□ -0.98
HOXA9-206ENST00000497089 PARD3Q8TEW0 1356 aa8.9□□□□□ -0.98
HOXA9-206ENST00000497089 CCDC7Q96M83 1385 aa8.9□□□□□ -0.98
HOXA9-206ENST00000497089 MYOM1P52179 1685 aa8.89□□□□□ -0.99
HOXA9-206ENST00000497089 ZBTB7CA1YPR0 619 aa8.89□□□□□ -0.99
HOXA9-206ENST00000497089 F12P00748 615 aaPredicted RBP8.89□□□□□ -0.99
HOXA9-206ENST00000497089 WASHC4Q2M389 1173 aa8.89□□□□□ -0.99
HOXA9-206ENST00000497089 TRIM34Q9BYJ4 488 aa8.89□□□□□ -0.99
HOXA9-206ENST00000497089 SERPINA10Q9UK55 444 aa8.89□□□□□ -0.99
HOXA9-206ENST00000497089 SBF2Q86WG5 1849 aa8.89□□□□□ -0.99
HOXA9-206ENST00000497089 OVOS2A0A0G2JMS6 1433 aa8.89□□□□□ -0.99
HOXA9-206ENST00000497089 TRIM37O94972 964 aa8.88□□□□□ -0.99
HOXA9-206ENST00000497089 CCDC24Q8N4L8 307 aa8.88□□□□□ -0.99
HOXA9-206ENST00000497089 RREB1Q92766 1687 aa8.88□□□□□ -0.99
HOXA9-206ENST00000497089 FAM208AQ9UK61 1670 aaKnown RBP8.88□□□□□ -0.99
HOXA9-206ENST00000497089 KCNH2Q12809 1159 aa8.87□□□□□ -0.99
HOXA9-206ENST00000497089 NR6A1Q15406 480 aa8.87□□□□□ -0.99
HOXA9-206ENST00000497089 DDB1Q16531 1140 aa8.87□□□□□ -0.99
HOXA9-206ENST00000497089 PLA2G2CQ5R387 149 aa8.87□□□□□ -0.99
HOXA9-206ENST00000497089 CAMKK2Q96RR4 588 aa8.87□□□□□ -0.99
HOXA9-206ENST00000497089 RGPD3A6NKT7 1758 aaPredicted RBP8.87□□□□□ -0.99
HOXA9-206ENST00000497089 RGPD4Q7Z3J3 1758 aa8.87□□□□□ -0.99
HOXA9-206ENST00000497089 FYB1O15117 783 aa8.86□□□□□ -0.99
HOXA9-206ENST00000497089 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
HOXA9-206ENST00000497089 IP6K1Q92551 441 aa8.86□□□□□ -0.99
HOXA9-206ENST00000497089 COG3Q96JB2 828 aa8.86□□□□□ -0.99
HOXA9-206ENST00000497089 MAP10Q9P2G4 905 aa8.86□□□□□ -0.99
HOXA9-206ENST00000497089 TNS2Q63HR2 1409 aa8.86□□□□□ -0.99
HOXA9-206ENST00000497089 KIF20BQ96Q89 1820 aa8.86□□□□□ -0.99
HOXA9-206ENST00000497089 NEFLP07196 543 aa8.86□□□□□ -0.99
HOXA9-206ENST00000497089 CTHP32929 405 aa8.86□□□□□ -0.99
HOXA9-206ENST00000497089 DEKP35659 375 aaKnown RBP8.86□□□□□ -0.99
HOXA9-206ENST00000497089 PTCRAQ6ISU1 281 aaPredicted RBP8.86□□□□□ -0.99
HOXA9-206ENST00000497089 MARCH10Q8NA82 808 aaPredicted RBP8.86□□□□□ -0.99
HOXA9-206ENST00000497089 EPS8L1Q8TE68 723 aa8.86□□□□□ -0.99
HOXA9-206ENST00000497089 CALR3Q96L12 384 aaKnown RBP8.86□□□□□ -0.99
HOXA9-206ENST00000497089 MAP3K19Q56UN5 1328 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms