RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 PRC1O43663 620 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 NR1I2O75469 434 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 PDGFAP04085 211 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 EIF4BP23588 611 aaKnown RBP2.59□□□□□ -1.99
UBR4-217ENST00000497018 YY1P25490 414 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 CTHP32929 405 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 SCTRP47872 440 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 SOX9P48436 509 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 EVA1CP58658 441 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 NFX1Q12986 1120 aaKnown RBP2.59□□□□□ -1.99
UBR4-217ENST00000497018 USP4Q13107 963 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 SQSTM1Q13501 440 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 MSS51Q4VC12 460 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 HSP90AB4PQ58FF6 505 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 C4orf48Q5BLP8 95 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 ARSHQ5FYA8 562 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 ODR4Q5SWX8 454 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 TSHZ1Q6ZSZ6 1077 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 ANKS3Q6ZW76 656 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 DZIP3Q86Y13 1208 aaKnown RBP2.59□□□□□ -1.99
UBR4-217ENST00000497018 RAVER1Q8IY67 606 aaKnown RBP2.59□□□□□ -1.99
UBR4-217ENST00000497018 SEPT12Q8IYM1 358 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 LILRB2Q8N423 598 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 MRPL50Q8N5N7 158 aaKnown RBP2.59□□□□□ -1.99
UBR4-217ENST00000497018 ABTB2Q8N961 1025 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 NKX2-3Q8TAU0 364 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 SH3TC2Q8TF17 1288 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 LRCH3Q96II8 777 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 SRPK1Q96SB4 655 aaKnown RBP2.59□□□□□ -1.99
UBR4-217ENST00000497018 SPOCK3Q9BQ16 436 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 NUDT12Q9BQG2 462 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 FAM126AQ9BYI3 521 aaPredicted RBP2.59□□□□□ -1.99
UBR4-217ENST00000497018 OSBPL7Q9BZF2 842 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 MAF1Q9H063 256 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 TSPAN10Q9H1Z9 355 aaPredicted RBP2.59□□□□□ -1.99
UBR4-217ENST00000497018 FANCLQ9NW38 375 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 GEMIN8Q9NWZ8 242 aaKnown RBP2.59□□□□□ -1.99
UBR4-217ENST00000497018 TMEM260Q9NX78 707 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 TERF2IPQ9NYB0 399 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 POLIQ9UNA4 740 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 PCDHB11Q9Y5F2 797 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 ATAD2Q6PL18 1390 aa2.59□□□□□ -2
UBR4-217ENST00000497018 ATAD2BQ9ULI0 1458 aa2.58□□□□□ -2
UBR4-217ENST00000497018 RIMS1Q86UR5 1692 aaKnown RBP2.58□□□□□ -2
UBR4-217ENST00000497018 ESYT3A0FGR9 886 aa2.58□□□□□ -2
UBR4-217ENST00000497018 GOLGA8CPA6NN73 597 aa2.58□□□□□ -2
UBR4-217ENST00000497018 MAFGO15525 162 aa2.58□□□□□ -2
UBR4-217ENST00000497018 STAU1O95793 577 aaKnown RBP2.58□□□□□ -2
UBR4-217ENST00000497018 ETFBP38117 255 aa2.58□□□□□ -2
UBR4-217ENST00000497018 MASP1P48740 699 aa2.58□□□□□ -2
UBR4-217ENST00000497018 NASPP49321 788 aaPredicted RBP2.58□□□□□ -2
UBR4-217ENST00000497018 CDKN1CP49918 316 aaPredicted RBP2.58□□□□□ -2
UBR4-217ENST00000497018 UBE4AQ14139 1066 aa2.58□□□□□ -2
UBR4-217ENST00000497018 TKFCQ3LXA3 575 aa2.58□□□□□ -2
UBR4-217ENST00000497018 CCSAPQ6IQ19 270 aaPredicted RBP2.58□□□□□ -2
UBR4-217ENST00000497018 PI16Q6UXB8 463 aa2.58□□□□□ -2
UBR4-217ENST00000497018 KRT26Q7Z3Y9 468 aa2.58□□□□□ -2
UBR4-217ENST00000497018 ZBTB33Q86T24 672 aa2.58□□□□□ -2
UBR4-217ENST00000497018 CCAR1Q8IX12 1150 aaKnown RBP2.58□□□□□ -2
UBR4-217ENST00000497018 ETFBKMTQ8IXQ9 262 aa2.58□□□□□ -2
UBR4-217ENST00000497018 TNS4Q8IZW8 715 aa2.58□□□□□ -2
UBR4-217ENST00000497018 JMYQ8N9B5 988 aa2.58□□□□□ -2
UBR4-217ENST00000497018 TRPM4Q8TD43 1214 aa2.58□□□□□ -2
UBR4-217ENST00000497018 HNRNPLLQ8WVV9 542 aaKnown RBP2.58□□□□□ -2
UBR4-217ENST00000497018 RPS6KC1Q96S38 1066 aa2.58□□□□□ -2
UBR4-217ENST00000497018 C2orf49Q9BVC5 232 aaPredicted RBP2.58□□□□□ -2
UBR4-217ENST00000497018 DNAJC25Q9H1X3 360 aa2.58□□□□□ -2
UBR4-217ENST00000497018 KCNQ5Q9NR82 932 aa2.58□□□□□ -2
UBR4-217ENST00000497018 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.58□□□□□ -2
UBR4-217ENST00000497018 ADAMTS1Q9UHI8 967 aa2.58□□□□□ -2
UBR4-217ENST00000497018 STRIP2Q9ULQ0 834 aa2.58□□□□□ -2
UBR4-217ENST00000497018 SPG7Q9UQ90 795 aa2.58□□□□□ -2
UBR4-217ENST00000497018 EID1Q9Y6B2 187 aa2.58□□□□□ -2
UBR4-217ENST00000497018 V9GY48 417 aaPredicted RBP2.58□□□□□ -2
UBR4-217ENST00000497018 ERBB3P21860 1342 aa2.58□□□□□ -2
UBR4-217ENST00000497018 FANCD2Q9BXW9 1451 aa2.58□□□□□ -2
UBR4-217ENST00000497018 ADAMTSL3P82987 1691 aa2.57□□□□□ -2
UBR4-217ENST00000497018 GIPC1O14908 333 aa2.57□□□□□ -2
UBR4-217ENST00000497018 PPP1R12AO14974 1030 aaPredicted RBP2.57□□□□□ -2
UBR4-217ENST00000497018 GARTP22102 1010 aa2.57□□□□□ -2
UBR4-217ENST00000497018 PAX3P23760 479 aa2.57□□□□□ -2
UBR4-217ENST00000497018 HSPA1LP34931 641 aa2.57□□□□□ -2
UBR4-217ENST00000497018 GNALP38405 381 aa2.57□□□□□ -2
UBR4-217ENST00000497018 USP5P45974 858 aa2.57□□□□□ -2
UBR4-217ENST00000497018 GYS2P54840 703 aa2.57□□□□□ -2
UBR4-217ENST00000497018 GDF10P55107 478 aa2.57□□□□□ -2
UBR4-217ENST00000497018 PPP4CP60510 307 aa2.57□□□□□ -2
UBR4-217ENST00000497018 MAP3K10Q02779 954 aa2.57□□□□□ -2
UBR4-217ENST00000497018 MTFR1Q15390 333 aa2.57□□□□□ -2
UBR4-217ENST00000497018 TAF1CQ15572 869 aaPredicted RBP2.57□□□□□ -2
UBR4-217ENST00000497018 MAP9Q49MG5 647 aa2.57□□□□□ -2
UBR4-217ENST00000497018 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.57□□□□□ -2
UBR4-217ENST00000497018 CLEC4GQ6UXB4 293 aa2.57□□□□□ -2
UBR4-217ENST00000497018 C11orf96Q7Z7L8 435 aa2.57□□□□□ -2
UBR4-217ENST00000497018 TRMT44Q8IYL2 757 aaKnown RBP2.57□□□□□ -2
UBR4-217ENST00000497018 ZNF295-AS1Q8N0V1 137 aa2.57□□□□□ -2
UBR4-217ENST00000497018 PGBD3Q8N328 593 aa2.57□□□□□ -2
UBR4-217ENST00000497018 FAM160A2Q8N612 972 aaPredicted RBP2.57□□□□□ -2
UBR4-217ENST00000497018 CELF2-AS1Q8N7Q2 184 aa2.57□□□□□ -2
UBR4-217ENST00000497018 PRPF38AQ8NAV1 312 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms