RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 LMOD3Q0VAK6 560 aa19.38■□□□□ 0.69
PTPN18-216ENST00000495400 PDIA6Q15084 440 aa19.38■□□□□ 0.69
PTPN18-216ENST00000495400 COL13A1Q5TAT6 717 aaPredicted RBP19.38■□□□□ 0.69
PTPN18-216ENST00000495400 PPP1R42Q7Z4L9 355 aa19.38■□□□□ 0.69
PTPN18-216ENST00000495400 SNED1Q8TER0 1413 aa19.38■□□□□ 0.69
PTPN18-216ENST00000495400 GRIPAP1Q4V328 841 aa19.37■□□□□ 0.69
PTPN18-216ENST00000495400 PARP10Q53GL7 1025 aa19.37■□□□□ 0.69
PTPN18-216ENST00000495400 LRP10Q7Z4F1 713 aa19.37■□□□□ 0.69
PTPN18-216ENST00000495400 JDP2Q8WYK2 163 aa19.37■□□□□ 0.69
PTPN18-216ENST00000495400 RBM17Q96I25 401 aaKnown RBP19.37■□□□□ 0.69
PTPN18-216ENST00000495400 CRAMP1Q96RY5 1269 aa19.37■□□□□ 0.69
PTPN18-216ENST00000495400 HACL1Q9UJ83 578 aa19.37■□□□□ 0.69
PTPN18-216ENST00000495400 PASKQ96RG2 1323 aa19.35■□□□□ 0.69
PTPN18-216ENST00000495400 HSPA1AP0DMV8 641 aaKnown RBP19.35■□□□□ 0.69
PTPN18-216ENST00000495400 HSPA1BP0DMV9 641 aaKnown RBP19.35■□□□□ 0.69
PTPN18-216ENST00000495400 EAPPQ56P03 285 aaPredicted RBP19.35■□□□□ 0.69
PTPN18-216ENST00000495400 GPC2Q8N158 579 aa19.35■□□□□ 0.69
PTPN18-216ENST00000495400 EPHX2P34913 555 aa19.34■□□□□ 0.69
PTPN18-216ENST00000495400 PROSER3Q2NL68 480 aa19.34■□□□□ 0.69
PTPN18-216ENST00000495400 NLRP3Q96P20 1036 aa19.34■□□□□ 0.69
PTPN18-216ENST00000495400 CLEC11AQ9Y240 323 aa19.34■□□□□ 0.69
PTPN18-216ENST00000495400 RNF123Q5XPI4 1314 aa19.33■□□□□ 0.69
PTPN18-216ENST00000495400 MYBBP1AQ9BQG0 1328 aaKnown RBP19.33■□□□□ 0.69
PTPN18-216ENST00000495400 PPEF1O14829 653 aaPredicted RBP19.33■□□□□ 0.68
PTPN18-216ENST00000495400 ANXA1P04083 346 aa19.33■□□□□ 0.68
PTPN18-216ENST00000495400 EIF6P56537 245 aaKnown RBP19.33■□□□□ 0.68
PTPN18-216ENST00000495400 SLC10A5Q5PT55 438 aa19.33■□□□□ 0.68
PTPN18-216ENST00000495400 C3orf67Q6ZVT6 689 aa19.33■□□□□ 0.68
PTPN18-216ENST00000495400 PNMA8AQ86V59 439 aaPredicted RBP19.33■□□□□ 0.68
PTPN18-216ENST00000495400 UTP14AQ9BVJ6 771 aaKnown RBP19.33■□□□□ 0.68
PTPN18-216ENST00000495400 MKRN1Q9UHC7 482 aaKnown RBP19.33■□□□□ 0.68
PTPN18-216ENST00000495400 ANKRD36CQ5JPF3 1778 aa19.33■□□□□ 0.68
PTPN18-216ENST00000495400 ADAMTSL1Q8N6G6 1762 aa19.33■□□□□ 0.68
PTPN18-216ENST00000495400 ITGBL1O95965 494 aaPredicted RBP19.32■□□□□ 0.68
PTPN18-216ENST00000495400 DDX10Q13206 875 aaKnown RBP19.32■□□□□ 0.68
PTPN18-216ENST00000495400 NEUROD2Q15784 382 aa19.32■□□□□ 0.68
PTPN18-216ENST00000495400 TCERG1O14776 1098 aaKnown RBP19.31■□□□□ 0.68
PTPN18-216ENST00000495400 HSP90AB3PQ58FF7 597 aa19.31■□□□□ 0.68
PTPN18-216ENST00000495400 COPS6Q7L5N1 327 aa19.31■□□□□ 0.68
PTPN18-216ENST00000495400 CCDC146Q8IYE0 955 aa19.31■□□□□ 0.68
PTPN18-216ENST00000495400 LARGE2Q8N3Y3 721 aa19.31■□□□□ 0.68
PTPN18-216ENST00000495400 NECTIN2Q92692 538 aa19.31■□□□□ 0.68
PTPN18-216ENST00000495400 COL4A5P29400 1685 aa19.3■□□□□ 0.68
PTPN18-216ENST00000495400 TMEM88BA6NKF7 163 aa19.3■□□□□ 0.68
PTPN18-216ENST00000495400 CHL1O00533 1208 aa19.3■□□□□ 0.68
PTPN18-216ENST00000495400 AIMP1Q12904 312 aaKnown RBP19.3■□□□□ 0.68
PTPN18-216ENST00000495400 XAGE3Q8WTP9 111 aa19.3■□□□□ 0.68
PTPN18-216ENST00000495400 TMX4Q9H1E5 349 aaPredicted RBP19.3■□□□□ 0.68
PTPN18-216ENST00000495400 GJA3Q9Y6H8 435 aa19.3■□□□□ 0.68
PTPN18-216ENST00000495400 PCNTO95613 3336 aa19.3■□□□□ 0.68
PTPN18-216ENST00000495400 LAMB2P55268 1798 aa19.29■□□□□ 0.68
PTPN18-216ENST00000495400 TNS4Q8IZW8 715 aa19.29■□□□□ 0.68
PTPN18-216ENST00000495400 RUNDC1Q96C34 613 aa19.29■□□□□ 0.68
PTPN18-216ENST00000495400 DDX21Q9NR30 783 aaKnown RBP eCLIP19.29■□□□□ 0.68
PTPN18-216ENST00000495400 CNTNAP1P78357 1384 aa19.29■□□□□ 0.68
PTPN18-216ENST00000495400 LMOD1P29536 600 aaPredicted RBP19.28■□□□□ 0.68
PTPN18-216ENST00000495400 TCIRG1Q13488 830 aa19.28■□□□□ 0.68
PTPN18-216ENST00000495400 WDR43Q15061 677 aaKnown RBP eCLIP19.28■□□□□ 0.68
PTPN18-216ENST00000495400 SLC51AQ86UW1 340 aa19.28■□□□□ 0.68
PTPN18-216ENST00000495400 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
PTPN18-216ENST00000495400 TRIM35Q9UPQ4 493 aa19.28■□□□□ 0.68
PTPN18-216ENST00000495400 ATP6V0A2Q9Y487 856 aa19.28■□□□□ 0.68
PTPN18-216ENST00000495400 LAS1LQ9Y4W2 734 aaKnown RBP19.28■□□□□ 0.68
PTPN18-216ENST00000495400 ABCC4O15439 1325 aa19.27■□□□□ 0.68
PTPN18-216ENST00000495400 NIM1KQ8IY84 436 aa19.27■□□□□ 0.68
PTPN18-216ENST00000495400 CNTROBQ8N137 903 aa19.27■□□□□ 0.68
PTPN18-216ENST00000495400 VPS33BQ9H267 617 aa19.27■□□□□ 0.68
PTPN18-216ENST00000495400 PPIP5K2O43314 1243 aa19.26■□□□□ 0.67
PTPN18-216ENST00000495400 BBOX1O75936 387 aa19.26■□□□□ 0.67
PTPN18-216ENST00000495400 KRT24Q2M2I5 525 aa19.26■□□□□ 0.67
PTPN18-216ENST00000495400 MAP1SQ66K74 1059 aaPredicted RBP19.26■□□□□ 0.67
PTPN18-216ENST00000495400 TRMT112Q9UI30 125 aaKnown RBP19.26■□□□□ 0.67
PTPN18-216ENST00000495400 LTBP1Q14766 1721 aa19.25■□□□□ 0.67
PTPN18-216ENST00000495400 HCLS1P14317 486 aaPredicted RBP19.25■□□□□ 0.67
PTPN18-216ENST00000495400 SUPT20HQ8NEM7 779 aa19.25■□□□□ 0.67
PTPN18-216ENST00000495400 ADAMTS8Q9UP79 889 aa19.25■□□□□ 0.67
PTPN18-216ENST00000495400 EPS15P42566 896 aa19.24■□□□□ 0.67
PTPN18-216ENST00000495400 VEGFBP49765 207 aa19.24■□□□□ 0.67
PTPN18-216ENST00000495400 SCNN1DP51172 638 aa19.24■□□□□ 0.67
PTPN18-216ENST00000495400 AOC3Q16853 763 aa19.24■□□□□ 0.67
PTPN18-216ENST00000495400 SP8Q8IXZ3 490 aa19.24■□□□□ 0.67
PTPN18-216ENST00000495400 RTFDC1Q9BY42 306 aaPredicted RBP19.24■□□□□ 0.67
PTPN18-216ENST00000495400 CHPF2Q9P2E5 772 aa19.24■□□□□ 0.67
PTPN18-216ENST00000495400 SH3TC1Q8TE82 1336 aa19.24■□□□□ 0.67
PTPN18-216ENST00000495400 HOXB7P09629 217 aa19.23■□□□□ 0.67
PTPN18-216ENST00000495400 HDGFL1Q5TGJ6 251 aa19.23■□□□□ 0.67
PTPN18-216ENST00000495400 DDX46Q7L014 1031 aaKnown RBP19.23■□□□□ 0.67
PTPN18-216ENST00000495400 TAF1P21675 1872 aa19.22■□□□□ 0.67
PTPN18-216ENST00000495400 DPP8Q6V1X1 898 aaPredicted RBP19.22■□□□□ 0.67
PTPN18-216ENST00000495400 USP50Q70EL3 339 aaPredicted RBP19.22■□□□□ 0.67
PTPN18-216ENST00000495400 MPNDQ8N594 471 aa19.22■□□□□ 0.67
PTPN18-216ENST00000495400 PLBD2Q8NHP8 589 aa19.22■□□□□ 0.67
PTPN18-216ENST00000495400 GRAPQ13588 217 aa19.21■□□□□ 0.67
PTPN18-216ENST00000495400 DEFB115Q30KQ5 88 aa19.21■□□□□ 0.67
PTPN18-216ENST00000495400 ANKRD13DQ6ZTN6 518 aa19.21■□□□□ 0.67
PTPN18-216ENST00000495400 GRAPLQ8TC17 118 aaPredicted RBP19.21■□□□□ 0.67
PTPN18-216ENST00000495400 CFAP44Q96MT7 982 aa19.21■□□□□ 0.67
PTPN18-216ENST00000495400 DBF4Q9UBU7 674 aaPredicted RBP19.21■□□□□ 0.67
PTPN18-216ENST00000495400 ZNRF3Q9ULT6 936 aa19.21■□□□□ 0.67
PTPN18-216ENST00000495400 RASSF10A6NK89 507 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms