RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 DZIP3Q86Y13 1208 aaKnown RBP11.42□□□□□ -0.58
ITGB1-217ENST00000494395 PXDNLA1KZ92 1463 aa11.42□□□□□ -0.58
ITGB1-217ENST00000494395 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
ITGB1-217ENST00000494395 ZNF521Q96K83 1311 aa11.41□□□□□ -0.58
ITGB1-217ENST00000494395 TBC1D9BQ66K14 1250 aa11.41□□□□□ -0.58
ITGB1-217ENST00000494395 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
ITGB1-217ENST00000494395 DPY19L2Q6NUT2 758 aa11.41□□□□□ -0.58
ITGB1-217ENST00000494395 NGEFQ8N5V2 710 aa11.41□□□□□ -0.58
ITGB1-217ENST00000494395 ZNF330Q9Y3S2 320 aaPredicted RBP11.41□□□□□ -0.58
ITGB1-217ENST00000494395 PARP3Q9Y6F1 533 aa11.41□□□□□ -0.58
ITGB1-217ENST00000494395 ATMINO43313 823 aaPredicted RBP11.4□□□□□ -0.58
ITGB1-217ENST00000494395 PROSER3Q2NL68 480 aa11.4□□□□□ -0.58
ITGB1-217ENST00000494395 CLEC4GQ6UXB4 293 aa11.4□□□□□ -0.58
ITGB1-217ENST00000494395 DDX27Q96GQ7 796 aaKnown RBP11.4□□□□□ -0.58
ITGB1-217ENST00000494395 ANKRD36CQ5JPF3 1778 aa11.4□□□□□ -0.58
ITGB1-217ENST00000494395 EIF2S2P20042 333 aaKnown RBP11.39□□□□□ -0.59
ITGB1-217ENST00000494395 DUSP27Q5VZP5 1158 aa11.39□□□□□ -0.59
ITGB1-217ENST00000494395 ASTLQ6HA08 431 aaPredicted RBP11.39□□□□□ -0.59
ITGB1-217ENST00000494395 TTLL7Q6ZT98 887 aa11.39□□□□□ -0.59
ITGB1-217ENST00000494395 WDR63Q8IWG1 891 aa11.39□□□□□ -0.59
ITGB1-217ENST00000494395 CARMIL3Q8ND23 1372 aa11.39□□□□□ -0.59
ITGB1-217ENST00000494395 MAP3K15Q6ZN16 1313 aa11.38□□□□□ -0.59
ITGB1-217ENST00000494395 COL11A2P13942 1736 aaPredicted RBP11.38□□□□□ -0.59
ITGB1-217ENST00000494395 ATP10DQ9P241 1426 aa11.38□□□□□ -0.59
ITGB1-217ENST00000494395 ERVV-1B6SEH8 477 aa11.38□□□□□ -0.59
ITGB1-217ENST00000494395 ANXA1P04083 346 aa11.38□□□□□ -0.59
ITGB1-217ENST00000494395 SERPINB2P05120 415 aa11.38□□□□□ -0.59
ITGB1-217ENST00000494395 MYL6BP14649 208 aa11.38□□□□□ -0.59
ITGB1-217ENST00000494395 HLFQ16534 295 aa11.38□□□□□ -0.59
ITGB1-217ENST00000494395 TSPYL6Q8N831 410 aa11.38□□□□□ -0.59
ITGB1-217ENST00000494395 C8orf58Q8NAV2 365 aa11.38□□□□□ -0.59
ITGB1-217ENST00000494395 TSR2Q969E8 191 aaKnown RBP11.38□□□□□ -0.59
ITGB1-217ENST00000494395 DDX21Q9NR30 783 aaKnown RBP eCLIP11.38□□□□□ -0.59
ITGB1-217ENST00000494395 ARFGEF1Q9Y6D6 1849 aa11.37□□□□□ -0.59
ITGB1-217ENST00000494395 CHD4Q14839 1912 aa11.37□□□□□ -0.59
ITGB1-217ENST00000494395 ARFGEF2Q9Y6D5 1785 aa11.37□□□□□ -0.59
ITGB1-217ENST00000494395 KCNA3P22001 575 aa11.37□□□□□ -0.59
ITGB1-217ENST00000494395 TGFB2P61812 414 aa11.37□□□□□ -0.59
ITGB1-217ENST00000494395 HDGFL1Q5TGJ6 251 aa11.37□□□□□ -0.59
ITGB1-217ENST00000494395 NPM2Q86SE8 214 aaKnown RBP11.37□□□□□ -0.59
ITGB1-217ENST00000494395 PDCD7Q8N8D1 485 aaKnown RBP11.37□□□□□ -0.59
ITGB1-217ENST00000494395 NECTIN2Q92692 538 aa11.37□□□□□ -0.59
ITGB1-217ENST00000494395 CHPF2Q9P2E5 772 aa11.37□□□□□ -0.59
ITGB1-217ENST00000494395 SALL2Q9Y467 1007 aaPredicted RBP11.37□□□□□ -0.59
ITGB1-217ENST00000494395 FANCIQ9NVI1 1328 aa11.36□□□□□ -0.59
ITGB1-217ENST00000494395 CACNA1FO60840 1977 aa11.36□□□□□ -0.59
ITGB1-217ENST00000494395 YBX3P16989 372 aaKnown RBP eCLIP11.36□□□□□ -0.59
ITGB1-217ENST00000494395 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
ITGB1-217ENST00000494395 BICDL1Q6ZP65 573 aa11.36□□□□□ -0.59
ITGB1-217ENST00000494395 ZNF652Q9Y2D9 606 aa11.36□□□□□ -0.59
ITGB1-217ENST00000494395 GOLGB1Q14789 3259 aaKnown RBP11.36□□□□□ -0.59
ITGB1-217ENST00000494395 GABBR2O75899 941 aa11.35□□□□□ -0.59
ITGB1-217ENST00000494395 IRX5P78411 483 aaPredicted RBP11.35□□□□□ -0.59
ITGB1-217ENST00000494395 PRR5LQ6MZQ0 368 aa11.35□□□□□ -0.59
ITGB1-217ENST00000494395 XAGE3Q8WTP9 111 aa11.35□□□□□ -0.59
ITGB1-217ENST00000494395 SETDB2Q96T68 719 aa11.35□□□□□ -0.59
ITGB1-217ENST00000494395 ZBTB3Q9H5J0 574 aa11.35□□□□□ -0.59
ITGB1-217ENST00000494395 DBF4Q9UBU7 674 aaPredicted RBP11.35□□□□□ -0.59
ITGB1-217ENST00000494395 IBTKQ9P2D0 1353 aaPredicted RBP11.35□□□□□ -0.59
ITGB1-217ENST00000494395 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
ITGB1-217ENST00000494395 TNRC6CQ9HCJ0 1690 aaKnown RBP11.34□□□□□ -0.59
ITGB1-217ENST00000494395 A0A0G2JLW4 131 aa11.34□□□□□ -0.59
ITGB1-217ENST00000494395 ELL2O00472 640 aaPredicted RBP11.34□□□□□ -0.59
ITGB1-217ENST00000494395 DPEP1P16444 411 aa11.34□□□□□ -0.59
ITGB1-217ENST00000494395 IER5LQ5T953 404 aa11.34□□□□□ -0.59
ITGB1-217ENST00000494395 KIF6Q6ZMV9 814 aa11.34□□□□□ -0.59
ITGB1-217ENST00000494395 COPS6Q7L5N1 327 aa11.34□□□□□ -0.59
ITGB1-217ENST00000494395 MICALL2Q8IY33 904 aa11.34□□□□□ -0.59
ITGB1-217ENST00000494395 ZNF34Q8IZ26 560 aa11.34□□□□□ -0.59
ITGB1-217ENST00000494395 RIC1Q4ADV7 1423 aa11.34□□□□□ -0.59
ITGB1-217ENST00000494395 UTRNP46939 3433 aa11.33□□□□□ -0.6
ITGB1-217ENST00000494395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.33□□□□□ -0.6
ITGB1-217ENST00000494395 OCEL1Q9H607 264 aa11.33□□□□□ -0.6
ITGB1-217ENST00000494395 GPHNQ9NQX3 736 aaPredicted RBP11.33□□□□□ -0.6
ITGB1-217ENST00000494395 HYPKQ9NX55 129 aa11.33□□□□□ -0.6
ITGB1-217ENST00000494395 NIP7Q9Y221 180 aaKnown RBP eCLIP11.33□□□□□ -0.6
ITGB1-217ENST00000494395 LAMB2P55268 1798 aa11.32□□□□□ -0.6
ITGB1-217ENST00000494395 CAMK2BQ13554 666 aa11.32□□□□□ -0.6
ITGB1-217ENST00000494395 GPR162Q16538 588 aa11.32□□□□□ -0.6
ITGB1-217ENST00000494395 TWISTNBQ3B726 338 aaPredicted RBP11.32□□□□□ -0.6
ITGB1-217ENST00000494395 CNBD1Q8NA66 436 aa11.32□□□□□ -0.6
ITGB1-217ENST00000494395 BRIP1Q9BX63 1249 aa11.32□□□□□ -0.6
ITGB1-217ENST00000494395 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
ITGB1-217ENST00000494395 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
ITGB1-217ENST00000494395 KLRG2A4D1S0 409 aaPredicted RBP11.31□□□□□ -0.6
ITGB1-217ENST00000494395 SEMA3EO15041 775 aa11.31□□□□□ -0.6
ITGB1-217ENST00000494395 VAMP4O75379 141 aa11.31□□□□□ -0.6
ITGB1-217ENST00000494395 NTSR2O95665 410 aa11.31□□□□□ -0.6
ITGB1-217ENST00000494395 CHRNA5P30532 468 aa11.31□□□□□ -0.6
ITGB1-217ENST00000494395 EXOSC9Q06265 439 aaKnown RBP11.31□□□□□ -0.6
ITGB1-217ENST00000494395 AIMP1Q12904 312 aaKnown RBP11.31□□□□□ -0.6
ITGB1-217ENST00000494395 CCDC30Q5VVM6 783 aa11.31□□□□□ -0.6
ITGB1-217ENST00000494395 CCDC24Q8N4L8 307 aa11.31□□□□□ -0.6
ITGB1-217ENST00000494395 PLBD2Q8NHP8 589 aa11.31□□□□□ -0.6
ITGB1-217ENST00000494395 PHAXQ9H814 394 aaKnown RBP11.31□□□□□ -0.6
ITGB1-217ENST00000494395 DDX60Q8IY21 1712 aaKnown RBP11.3□□□□□ -0.6
ITGB1-217ENST00000494395 GPTP24298 496 aa11.3□□□□□ -0.6
ITGB1-217ENST00000494395 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
ITGB1-217ENST00000494395 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
ITGB1-217ENST00000494395 SUSD4Q5VX71 490 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms