RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
NUDCD3-210ENST00000493613 PSMD1Q99460 953 aa13.5□□□□□ -0.25
NUDCD3-210ENST00000493613 TAF1DQ9H5J8 278 aaPredicted RBP13.5□□□□□ -0.25
NUDCD3-210ENST00000493613 NTSR2O95665 410 aa13.49□□□□□ -0.25
NUDCD3-210ENST00000493613 EIF2S2P20042 333 aaKnown RBP13.49□□□□□ -0.25
NUDCD3-210ENST00000493613 HOXA10P31260 410 aaPredicted RBP13.49□□□□□ -0.25
NUDCD3-210ENST00000493613 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
NUDCD3-210ENST00000493613 FZD9O00144 591 aa13.48□□□□□ -0.25
NUDCD3-210ENST00000493613 TMPOP42166 694 aaKnown RBP13.48□□□□□ -0.25
NUDCD3-210ENST00000493613 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
NUDCD3-210ENST00000493613 EAPPQ56P03 285 aaPredicted RBP13.48□□□□□ -0.25
NUDCD3-210ENST00000493613 CC2D2BQ6DHV5 1058 aa13.48□□□□□ -0.25
NUDCD3-210ENST00000493613 PPP1R42Q7Z4L9 355 aa13.48□□□□□ -0.25
NUDCD3-210ENST00000493613 JDP2Q8WYK2 163 aa13.48□□□□□ -0.25
NUDCD3-210ENST00000493613 BABAM1Q9NWV8 329 aa13.48□□□□□ -0.25
NUDCD3-210ENST00000493613 HACL1Q9UJ83 578 aa13.48□□□□□ -0.25
NUDCD3-210ENST00000493613 RNF123Q5XPI4 1314 aa13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 HSPA1AP0DMV8 641 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 HSPA1BP0DMV9 641 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 PDIA6Q15084 440 aa13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 GRIPAP1Q4V328 841 aa13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 PARP10Q53GL7 1025 aa13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 LRP10Q7Z4F1 713 aa13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 GPC2Q8N158 579 aa13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 RBM17Q96I25 401 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 CRAMP1Q96RY5 1269 aa13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 MKRN1Q9UHC7 482 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
NUDCD3-210ENST00000493613 PASKQ96RG2 1323 aa13.46□□□□□ -0.25
NUDCD3-210ENST00000493613 MYBBP1AQ9BQG0 1328 aaKnown RBP13.46□□□□□ -0.25
NUDCD3-210ENST00000493613 PPEF1O14829 653 aaPredicted RBP13.46□□□□□ -0.25
NUDCD3-210ENST00000493613 ANXA1P04083 346 aa13.46□□□□□ -0.25
NUDCD3-210ENST00000493613 EPHX2P34913 555 aa13.46□□□□□ -0.25
NUDCD3-210ENST00000493613 NEUROD2Q15784 382 aa13.46□□□□□ -0.25
NUDCD3-210ENST00000493613 PROSER3Q2NL68 480 aa13.46□□□□□ -0.25
NUDCD3-210ENST00000493613 NECTIN2Q92692 538 aa13.46□□□□□ -0.25
NUDCD3-210ENST00000493613 CLEC11AQ9Y240 323 aa13.46□□□□□ -0.25
NUDCD3-210ENST00000493613 TCERG1O14776 1098 aaKnown RBP13.45□□□□□ -0.26
NUDCD3-210ENST00000493613 EIF6P56537 245 aaKnown RBP13.45□□□□□ -0.26
NUDCD3-210ENST00000493613 C3orf67Q6ZVT6 689 aa13.45□□□□□ -0.26
NUDCD3-210ENST00000493613 PNMA8AQ86V59 439 aaPredicted RBP13.45□□□□□ -0.26
NUDCD3-210ENST00000493613 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
NUDCD3-210ENST00000493613 NLRP3Q96P20 1036 aa13.45□□□□□ -0.26
NUDCD3-210ENST00000493613 UTP14AQ9BVJ6 771 aaKnown RBP13.45□□□□□ -0.26
NUDCD3-210ENST00000493613 ITGBL1O95965 494 aaPredicted RBP13.44□□□□□ -0.26
NUDCD3-210ENST00000493613 AIMP1Q12904 312 aaKnown RBP13.44□□□□□ -0.26
NUDCD3-210ENST00000493613 COPS6Q7L5N1 327 aa13.44□□□□□ -0.26
NUDCD3-210ENST00000493613 SLC51AQ86UW1 340 aa13.44□□□□□ -0.26
NUDCD3-210ENST00000493613 TNS4Q8IZW8 715 aa13.44□□□□□ -0.26
NUDCD3-210ENST00000493613 LARGE2Q8N3Y3 721 aa13.44□□□□□ -0.26
NUDCD3-210ENST00000493613 GJA3Q9Y6H8 435 aa13.44□□□□□ -0.26
NUDCD3-210ENST00000493613 CNTNAP1P78357 1384 aa13.44□□□□□ -0.26
NUDCD3-210ENST00000493613 TMEM88BA6NKF7 163 aa13.43□□□□□ -0.26
NUDCD3-210ENST00000493613 WDR43Q15061 677 aaKnown RBP eCLIP13.43□□□□□ -0.26
NUDCD3-210ENST00000493613 HSP90AB3PQ58FF7 597 aa13.43□□□□□ -0.26
NUDCD3-210ENST00000493613 SLC10A5Q5PT55 438 aa13.43□□□□□ -0.26
NUDCD3-210ENST00000493613 XAGE3Q8WTP9 111 aa13.43□□□□□ -0.26
NUDCD3-210ENST00000493613 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
NUDCD3-210ENST00000493613 LAS1LQ9Y4W2 734 aaKnown RBP13.43□□□□□ -0.26
NUDCD3-210ENST00000493613 ABCC4O15439 1325 aa13.42□□□□□ -0.26
NUDCD3-210ENST00000493613 CHL1O00533 1208 aa13.42□□□□□ -0.26
NUDCD3-210ENST00000493613 LMOD1P29536 600 aaPredicted RBP13.42□□□□□ -0.26
NUDCD3-210ENST00000493613 KRT24Q2M2I5 525 aa13.42□□□□□ -0.26
NUDCD3-210ENST00000493613 MAP1SQ66K74 1059 aaPredicted RBP13.42□□□□□ -0.26
NUDCD3-210ENST00000493613 NLRP10Q86W26 655 aa13.42□□□□□ -0.26
NUDCD3-210ENST00000493613 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
NUDCD3-210ENST00000493613 DDX21Q9NR30 783 aaKnown RBP eCLIP13.42□□□□□ -0.26
NUDCD3-210ENST00000493613 ATP6V0A2Q9Y487 856 aa13.42□□□□□ -0.26
NUDCD3-210ENST00000493613 PPIP5K2O43314 1243 aa13.41□□□□□ -0.26
NUDCD3-210ENST00000493613 NIM1KQ8IY84 436 aa13.41□□□□□ -0.26
NUDCD3-210ENST00000493613 CNTROBQ8N137 903 aa13.41□□□□□ -0.26
NUDCD3-210ENST00000493613 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
NUDCD3-210ENST00000493613 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
NUDCD3-210ENST00000493613 DUOX1Q9NRD9 1551 aa13.41□□□□□ -0.26
NUDCD3-210ENST00000493613 THSD7BQ9C0I4 1608 aa13.4□□□□□ -0.26
NUDCD3-210ENST00000493613 CAPN15O75808 1086 aa13.4□□□□□ -0.26
NUDCD3-210ENST00000493613 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
NUDCD3-210ENST00000493613 SCNN1DP51172 638 aa13.4□□□□□ -0.26
NUDCD3-210ENST00000493613 TCIRG1Q13488 830 aa13.4□□□□□ -0.26
NUDCD3-210ENST00000493613 AOC3Q16853 763 aa13.4□□□□□ -0.26
NUDCD3-210ENST00000493613 CHPF2Q9P2E5 772 aa13.4□□□□□ -0.26
NUDCD3-210ENST00000493613 MYH3P11055 1940 aa13.4□□□□□ -0.26
NUDCD3-210ENST00000493613 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
NUDCD3-210ENST00000493613 BBOX1O75936 387 aa13.39□□□□□ -0.27
NUDCD3-210ENST00000493613 EPS15P42566 896 aa13.39□□□□□ -0.27
NUDCD3-210ENST00000493613 HDGFL1Q5TGJ6 251 aa13.39□□□□□ -0.27
NUDCD3-210ENST00000493613 SUPT20HQ8NEM7 779 aa13.39□□□□□ -0.27
NUDCD3-210ENST00000493613 VPS33BQ9H267 617 aa13.39□□□□□ -0.27
NUDCD3-210ENST00000493613 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
NUDCD3-210ENST00000493613 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
NUDCD3-210ENST00000493613 POLR2AP24928 1970 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-210ENST00000493613 VEGFBP49765 207 aa13.38□□□□□ -0.27
NUDCD3-210ENST00000493613 DPP8Q6V1X1 898 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-210ENST00000493613 DDX46Q7L014 1031 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-210ENST00000493613 SP8Q8IXZ3 490 aa13.38□□□□□ -0.27
NUDCD3-210ENST00000493613 ZNF428Q96B54 188 aa13.38□□□□□ -0.27
NUDCD3-210ENST00000493613 DBF4Q9UBU7 674 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-210ENST00000493613 COL4A1P02462 1669 aa13.37□□□□□ -0.27
NUDCD3-210ENST00000493613 PSME4Q14997 1843 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms