RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 CRAMP1Q96RY5 1269 aa22.7■■□□□ 1.22
PBX3-209ENST00000491787 TAF1DQ9H5J8 278 aaPredicted RBP22.7■■□□□ 1.22
PBX3-209ENST00000491787 ZNF541Q9H0D2 1346 aa22.69■■□□□ 1.22
PBX3-209ENST00000491787 POTEIP0CG38 1075 aa22.69■■□□□ 1.22
PBX3-209ENST00000491787 POTEJP0CG39 1038 aa22.69■■□□□ 1.22
PBX3-209ENST00000491787 DDX10Q13206 875 aaKnown RBP22.69■■□□□ 1.22
PBX3-209ENST00000491787 GRIPAP1Q4V328 841 aa22.69■■□□□ 1.22
PBX3-209ENST00000491787 CHL1O00533 1208 aa22.68■■□□□ 1.22
PBX3-209ENST00000491787 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
PBX3-209ENST00000491787 PROSER3Q2NL68 480 aa22.68■■□□□ 1.22
PBX3-209ENST00000491787 PPP1R42Q7Z4L9 355 aa22.68■■□□□ 1.22
PBX3-209ENST00000491787 LDHDQ86WU2 507 aa22.67■■□□□ 1.22
PBX3-209ENST00000491787 RPGRQ92834 1020 aaKnown RBP22.67■■□□□ 1.22
PBX3-209ENST00000491787 C3orf67Q6ZVT6 689 aa22.66■■□□□ 1.22
PBX3-209ENST00000491787 RBM17Q96I25 401 aaKnown RBP22.66■■□□□ 1.22
PBX3-209ENST00000491787 CREBZFQ9NS37 354 aa22.66■■□□□ 1.22
PBX3-209ENST00000491787 TRIM35Q9UPQ4 493 aa22.66■■□□□ 1.22
PBX3-209ENST00000491787 PASKQ96RG2 1323 aa22.65■■□□□ 1.22
PBX3-209ENST00000491787 RUNDC1Q96C34 613 aa22.65■■□□□ 1.22
PBX3-209ENST00000491787 ANKRD36CQ5JPF3 1778 aa22.65■■□□□ 1.22
PBX3-209ENST00000491787 ADAMTSL1Q8N6G6 1762 aa22.65■■□□□ 1.22
PBX3-209ENST00000491787 RNF123Q5XPI4 1314 aa22.64■■□□□ 1.22
PBX3-209ENST00000491787 ANXA1P04083 346 aa22.64■■□□□ 1.21
PBX3-209ENST00000491787 GPC2Q8N158 579 aa22.64■■□□□ 1.21
PBX3-209ENST00000491787 NLRP3Q96P20 1036 aa22.64■■□□□ 1.21
PBX3-209ENST00000491787 UTP14AQ9BVJ6 771 aaKnown RBP22.64■■□□□ 1.21
PBX3-209ENST00000491787 DDX21Q9NR30 783 aaKnown RBP eCLIP22.64■■□□□ 1.21
PBX3-209ENST00000491787 COL4A5P29400 1685 aa22.64■■□□□ 1.21
PBX3-209ENST00000491787 ITGBL1O95965 494 aaPredicted RBP22.63■■□□□ 1.21
PBX3-209ENST00000491787 COPS6Q7L5N1 327 aa22.63■■□□□ 1.21
PBX3-209ENST00000491787 CCDC146Q8IYE0 955 aa22.63■■□□□ 1.21
PBX3-209ENST00000491787 HACL1Q9UJ83 578 aa22.63■■□□□ 1.21
PBX3-209ENST00000491787 HSP90AB3PQ58FF7 597 aa22.62■■□□□ 1.21
PBX3-209ENST00000491787 JDP2Q8WYK2 163 aa22.62■■□□□ 1.21
PBX3-209ENST00000491787 ADAMTS8Q9UP79 889 aa22.62■■□□□ 1.21
PBX3-209ENST00000491787 LAMB2P55268 1798 aa22.61■■□□□ 1.21
PBX3-209ENST00000491787 EPHX2P34913 555 aa22.61■■□□□ 1.21
PBX3-209ENST00000491787 TCIRG1Q13488 830 aa22.61■■□□□ 1.21
PBX3-209ENST00000491787 NLRP10Q86W26 655 aa22.61■■□□□ 1.21
PBX3-209ENST00000491787 XAGE3Q8WTP9 111 aa22.61■■□□□ 1.21
PBX3-209ENST00000491787 PPEF1O14829 653 aaPredicted RBP22.6■■□□□ 1.21
PBX3-209ENST00000491787 NEUROD2Q15784 382 aa22.6■■□□□ 1.21
PBX3-209ENST00000491787 KRT24Q2M2I5 525 aa22.6■■□□□ 1.21
PBX3-209ENST00000491787 COL13A1Q5TAT6 717 aaPredicted RBP22.6■■□□□ 1.21
PBX3-209ENST00000491787 VPS33BQ9H267 617 aa22.6■■□□□ 1.21
PBX3-209ENST00000491787 HOXB7P09629 217 aa22.59■■□□□ 1.21
PBX3-209ENST00000491787 SLC51AQ86UW1 340 aa22.59■■□□□ 1.21
PBX3-209ENST00000491787 PNMA8AQ86V59 439 aaPredicted RBP22.59■■□□□ 1.21
PBX3-209ENST00000491787 ATP6V0A2Q9Y487 856 aa22.59■■□□□ 1.21
PBX3-209ENST00000491787 NECTIN2Q92692 538 aa22.58■■□□□ 1.21
PBX3-209ENST00000491787 BBOX1O75936 387 aa22.57■■□□□ 1.2
PBX3-209ENST00000491787 EIF6P56537 245 aaKnown RBP22.57■■□□□ 1.2
PBX3-209ENST00000491787 AIMP1Q12904 312 aaKnown RBP22.57■■□□□ 1.2
PBX3-209ENST00000491787 WDR43Q15061 677 aaKnown RBP eCLIP22.57■■□□□ 1.2
PBX3-209ENST00000491787 RTFDC1Q9BY42 306 aaPredicted RBP22.57■■□□□ 1.2
PBX3-209ENST00000491787 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
PBX3-209ENST00000491787 ABCC4O15439 1325 aa22.57■■□□□ 1.2
PBX3-209ENST00000491787 HSPA1AP0DMV8 641 aaKnown RBP22.56■■□□□ 1.2
PBX3-209ENST00000491787 HSPA1BP0DMV9 641 aaKnown RBP22.56■■□□□ 1.2
PBX3-209ENST00000491787 EAPPQ56P03 285 aaPredicted RBP22.56■■□□□ 1.2
PBX3-209ENST00000491787 LARGE2Q8N3Y3 721 aa22.56■■□□□ 1.2
PBX3-209ENST00000491787 CFAP44Q96MT7 982 aa22.56■■□□□ 1.2
PBX3-209ENST00000491787 LTBP1Q14766 1721 aa22.56■■□□□ 1.2
PBX3-209ENST00000491787 CNTNAP1P78357 1384 aa22.55■■□□□ 1.2
PBX3-209ENST00000491787 SP8Q8IXZ3 490 aa22.55■■□□□ 1.2
PBX3-209ENST00000491787 CHPF2Q9P2E5 772 aa22.55■■□□□ 1.2
PBX3-209ENST00000491787 SH3TC1Q8TE82 1336 aa22.55■■□□□ 1.2
PBX3-209ENST00000491787 TAF1P21675 1872 aa22.54■■□□□ 1.2
PBX3-209ENST00000491787 TMEM88BA6NKF7 163 aa22.54■■□□□ 1.2
PBX3-209ENST00000491787 ZNF853P0CG23 659 aa22.54■■□□□ 1.2
PBX3-209ENST00000491787 HCLS1P14317 486 aaPredicted RBP22.54■■□□□ 1.2
PBX3-209ENST00000491787 PLBD2Q8NHP8 589 aa22.54■■□□□ 1.2
PBX3-209ENST00000491787 LAS1LQ9Y4W2 734 aaKnown RBP22.54■■□□□ 1.2
PBX3-209ENST00000491787 TCERG1O14776 1098 aaKnown RBP22.53■■□□□ 1.2
PBX3-209ENST00000491787 SCNN1DP51172 638 aa22.53■■□□□ 1.2
PBX3-209ENST00000491787 CNTROBQ8N137 903 aa22.53■■□□□ 1.2
PBX3-209ENST00000491787 ISCA1Q9BUE6 129 aa22.53■■□□□ 1.2
PBX3-209ENST00000491787 MKRN1Q9UHC7 482 aaKnown RBP22.53■■□□□ 1.2
PBX3-209ENST00000491787 TRMT112Q9UI30 125 aaKnown RBP22.53■■□□□ 1.2
PBX3-209ENST00000491787 CLEC11AQ9Y240 323 aa22.53■■□□□ 1.2
PBX3-209ENST00000491787 HDGFL1Q5TGJ6 251 aa22.52■■□□□ 1.2
PBX3-209ENST00000491787 ANKRD13DQ6ZTN6 518 aa22.52■■□□□ 1.2
PBX3-209ENST00000491787 SUPT20HQ8NEM7 779 aa22.52■■□□□ 1.2
PBX3-209ENST00000491787 TMX4Q9H1E5 349 aaPredicted RBP22.52■■□□□ 1.2
PBX3-209ENST00000491787 DBF4Q9UBU7 674 aaPredicted RBP22.52■■□□□ 1.2
PBX3-209ENST00000491787 GJA3Q9Y6H8 435 aa22.52■■□□□ 1.2
PBX3-209ENST00000491787 DDX60Q8IY21 1712 aaKnown RBP22.51■■□□□ 1.19
PBX3-209ENST00000491787 PPIP5K2O43314 1243 aa22.51■■□□□ 1.19
PBX3-209ENST00000491787 TRIM28Q13263 835 aaKnown RBP22.51■■□□□ 1.19
PBX3-209ENST00000491787 NIM1KQ8IY84 436 aa22.51■■□□□ 1.19
PBX3-209ENST00000491787 EPS15P42566 896 aa22.5■■□□□ 1.19
PBX3-209ENST00000491787 GRAPQ13588 217 aa22.5■■□□□ 1.19
PBX3-209ENST00000491787 DUSP27Q5VZP5 1158 aa22.5■■□□□ 1.19
PBX3-209ENST00000491787 MAP1SQ66K74 1059 aaPredicted RBP22.5■■□□□ 1.19
PBX3-209ENST00000491787 DDX46Q7L014 1031 aaKnown RBP22.5■■□□□ 1.19
PBX3-209ENST00000491787 GRAPLQ8TC17 118 aaPredicted RBP22.5■■□□□ 1.19
PBX3-209ENST00000491787 MBIPQ9NS73 344 aa22.5■■□□□ 1.19
PBX3-209ENST00000491787 HYPKQ9NX55 129 aa22.5■■□□□ 1.19
PBX3-209ENST00000491787 ZNRF3Q9ULT6 936 aa22.5■■□□□ 1.19
PBX3-209ENST00000491787 LMOD1P29536 600 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms