RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCYT1A-216ENST00000491544 INTS5Q6P9B9 1019 aaKnown RBP13.75□□□□□ -0.21
PCYT1A-216ENST00000491544 C7orf43Q8WVR3 580 aa13.75□□□□□ -0.21
PCYT1A-216ENST00000491544 RBBP6Q7Z6E9 1792 aaKnown RBP13.75□□□□□ -0.21
PCYT1A-216ENST00000491544 INTS3Q68E01 1043 aaKnown RBP13.74□□□□□ -0.21
PCYT1A-216ENST00000491544 STYK1Q6J9G0 422 aa13.74□□□□□ -0.21
PCYT1A-216ENST00000491544 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
PCYT1A-216ENST00000491544 FAM9BQ8IZU0 186 aa13.74□□□□□ -0.21
PCYT1A-216ENST00000491544 CCDC102AQ96A19 550 aa13.74□□□□□ -0.21
PCYT1A-216ENST00000491544 SPG7Q9UQ90 795 aa13.74□□□□□ -0.21
PCYT1A-216ENST00000491544 ARFGEF2Q9Y6D5 1785 aa13.73□□□□□ -0.21
PCYT1A-216ENST00000491544 SOS1Q07889 1333 aaPredicted RBP13.73□□□□□ -0.21
PCYT1A-216ENST00000491544 AKAP11Q9UKA4 1901 aa13.73□□□□□ -0.21
PCYT1A-216ENST00000491544 SOX1O00570 391 aaPredicted RBP13.73□□□□□ -0.21
PCYT1A-216ENST00000491544 IARSP41252 1262 aaKnown RBP13.73□□□□□ -0.21
PCYT1A-216ENST00000491544 SULT6B1Q6IMI4 303 aa13.73□□□□□ -0.21
PCYT1A-216ENST00000491544 CCDC24Q8N4L8 307 aa13.73□□□□□ -0.21
PCYT1A-216ENST00000491544 NARFQ9UHQ1 456 aa13.73□□□□□ -0.21
PCYT1A-216ENST00000491544 RAPGEFL1Q9UHV5 662 aa13.73□□□□□ -0.21
PCYT1A-216ENST00000491544 CACNA1AO00555 2505 aa13.72□□□□□ -0.21
PCYT1A-216ENST00000491544 PHKG2P15735 406 aa13.72□□□□□ -0.21
PCYT1A-216ENST00000491544 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.72□□□□□ -0.21
PCYT1A-216ENST00000491544 TJP1Q07157 1748 aa13.72□□□□□ -0.21
PCYT1A-216ENST00000491544 NCAPD2Q15021 1401 aa13.72□□□□□ -0.21
PCYT1A-216ENST00000491544 CACNA1SQ13698 1873 aa13.72□□□□□ -0.21
PCYT1A-216ENST00000491544 ERBB4Q15303 1308 aa13.71□□□□□ -0.21
PCYT1A-216ENST00000491544 DLG5Q8TDM6 1919 aa13.71□□□□□ -0.21
PCYT1A-216ENST00000491544 SRGNP10124 158 aa13.71□□□□□ -0.21
PCYT1A-216ENST00000491544 ZNF157P51786 506 aaPredicted RBP13.71□□□□□ -0.21
PCYT1A-216ENST00000491544 PNISRQ8TF01 805 aaKnown RBP13.71□□□□□ -0.21
PCYT1A-216ENST00000491544 LRCH3Q96II8 777 aa13.71□□□□□ -0.21
PCYT1A-216ENST00000491544 PRO3102Q9H379 93 aa13.71□□□□□ -0.21
PCYT1A-216ENST00000491544 ADARB2Q9NS39 739 aaKnown RBP13.71□□□□□ -0.21
PCYT1A-216ENST00000491544 ADAMTS8Q9UP79 889 aa13.71□□□□□ -0.21
PCYT1A-216ENST00000491544 COL4A5P29400 1685 aa13.71□□□□□ -0.21
PCYT1A-216ENST00000491544 EYSQ5T1H1 3165 aa13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 PTCD1O75127 700 aaKnown RBP13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 SLC10A3P09131 477 aa13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 PRKAR2BP31323 418 aa13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 EIF6P56537 245 aaKnown RBP13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 PRR5LQ6MZQ0 368 aa13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 OLFM4Q6UX06 510 aa13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 CCDC146Q8IYE0 955 aa13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 PGAP2Q9UHJ9 254 aa13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 STXBP5LQ9Y2K9 1186 aa13.7□□□□□ -0.22
PCYT1A-216ENST00000491544 TBC1D8O95759 1140 aa13.69□□□□□ -0.22
PCYT1A-216ENST00000491544 IFNL2Q8IZJ0 200 aa13.69□□□□□ -0.22
PCYT1A-216ENST00000491544 FAM122AQ96E09 287 aa13.69□□□□□ -0.22
PCYT1A-216ENST00000491544 MASTLQ96GX5 879 aa13.69□□□□□ -0.22
PCYT1A-216ENST00000491544 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
PCYT1A-216ENST00000491544 KIAA0100Q14667 2235 aaKnown RBP13.69□□□□□ -0.22
PCYT1A-216ENST00000491544 COL15A1P39059 1388 aa13.69□□□□□ -0.22
PCYT1A-216ENST00000491544 JDP2Q8WYK2 163 aa13.68□□□□□ -0.22
PCYT1A-216ENST00000491544 GPR25O00155 361 aa13.67□□□□□ -0.22
PCYT1A-216ENST00000491544 CDC37L1Q7L3B6 337 aa13.67□□□□□ -0.22
PCYT1A-216ENST00000491544 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
PCYT1A-216ENST00000491544 RTKN2Q8IZC4 609 aa13.67□□□□□ -0.22
PCYT1A-216ENST00000491544 ERVV-2B6SEH9 535 aa13.66□□□□□ -0.22
PCYT1A-216ENST00000491544 NOM1Q5C9Z4 860 aaKnown RBP13.66□□□□□ -0.22
PCYT1A-216ENST00000491544 DLK2Q6UY11 383 aa13.66□□□□□ -0.22
PCYT1A-216ENST00000491544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.224e-7■□□□□ 10.5
PCYT1A-216ENST00000491544 GPRC5DQ9NZD1 345 aa13.66□□□□□ -0.22
PCYT1A-216ENST00000491544 TTC28Q96AY4 2481 aa13.66□□□□□ -0.22
PCYT1A-216ENST00000491544 MAPK8IP3Q9UPT6 1336 aa13.65□□□□□ -0.22
PCYT1A-216ENST00000491544 GBA2Q9HCG7 927 aaPredicted RBP13.65□□□□□ -0.22
PCYT1A-216ENST00000491544 PRUNE2Q8WUY3 3088 aa13.65□□□□□ -0.23
PCYT1A-216ENST00000491544 NEFMP07197 916 aa13.64□□□□□ -0.23
PCYT1A-216ENST00000491544 PHACTR3Q96KR7 559 aa13.64□□□□□ -0.23
PCYT1A-216ENST00000491544 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
PCYT1A-216ENST00000491544 LAMA2P24043 3122 aaKnown RBP13.63□□□□□ -0.23
PCYT1A-216ENST00000491544 TBC1D9BQ66K14 1250 aa13.63□□□□□ -0.23
PCYT1A-216ENST00000491544 USP48Q86UV5 1035 aa13.63□□□□□ -0.23
PCYT1A-216ENST00000491544 C2orf69Q8N8R5 385 aa13.63□□□□□ -0.23
PCYT1A-216ENST00000491544 ZC3H15Q8WU90 426 aaKnown RBP13.63□□□□□ -0.23
PCYT1A-216ENST00000491544 RUNDC1Q96C34 613 aa13.63□□□□□ -0.23
PCYT1A-216ENST00000491544 SNED1Q8TER0 1413 aa13.63□□□□□ -0.23
PCYT1A-216ENST00000491544 LAMB4A4D0S4 1761 aa13.63□□□□□ -0.23
PCYT1A-216ENST00000491544 FKTNO75072 461 aa13.62□□□□□ -0.23
PCYT1A-216ENST00000491544 HIRAP54198 1017 aaPredicted RBP13.62□□□□□ -0.23
PCYT1A-216ENST00000491544 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
PCYT1A-216ENST00000491544 DEFB123Q8N688 67 aa13.62□□□□□ -0.23
PCYT1A-216ENST00000491544 ARMC5Q96C12 935 aa13.62□□□□□ -0.23
PCYT1A-216ENST00000491544 SNX27Q96L92 541 aa13.62□□□□□ -0.23
PCYT1A-216ENST00000491544 PNNQ9H307 717 aaKnown RBP13.62□□□□□ -0.23
PCYT1A-216ENST00000491544 RRP7AQ9Y3A4 280 aaKnown RBP13.62□□□□□ -0.23
PCYT1A-216ENST00000491544 NEUROD2Q15784 382 aa13.61□□□□□ -0.23
PCYT1A-216ENST00000491544 MTHFSDQ2M296 383 aaKnown RBP13.61□□□□□ -0.23
PCYT1A-216ENST00000491544 PLEKHO1Q53GL0 409 aaPredicted RBP13.61□□□□□ -0.23
PCYT1A-216ENST00000491544 ZNF530Q6P9A1 599 aaPredicted RBP13.61□□□□□ -0.23
PCYT1A-216ENST00000491544 RASAL3Q86YV0 1011 aa13.61□□□□□ -0.23
PCYT1A-216ENST00000491544 DNAJC10Q8IXB1 793 aa13.61□□□□□ -0.23
PCYT1A-216ENST00000491544 CNBD1Q8NA66 436 aa13.61□□□□□ -0.23
PCYT1A-216ENST00000491544 PSMD1Q99460 953 aa13.61□□□□□ -0.23
PCYT1A-216ENST00000491544 A0A1W2PPC1 479 aa13.6□□□□□ -0.23
PCYT1A-216ENST00000491544 APAF1O14727 1248 aa13.6□□□□□ -0.23
PCYT1A-216ENST00000491544 CABP4P57796 275 aa13.6□□□□□ -0.23
PCYT1A-216ENST00000491544 Q7L0L9 218 aa13.6□□□□□ -0.23
PCYT1A-216ENST00000491544 TRPM4Q8TD43 1214 aa13.6□□□□□ -0.23
PCYT1A-216ENST00000491544 ZBTB1Q9Y2K1 713 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms