RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 COL13A1Q5TAT6 717 aaPredicted RBP23.33■■□□□ 1.33
YIPF3-208ENST00000490447 ZNF34Q8IZ26 560 aa23.33■■□□□ 1.33
YIPF3-208ENST00000490447 BABAM1Q9NWV8 329 aa23.33■■□□□ 1.33
YIPF3-208ENST00000490447 SCN4AP35499 1836 aa23.33■■□□□ 1.32
YIPF3-208ENST00000490447 HSPA1AP0DMV8 641 aaKnown RBP23.33■■□□□ 1.32
YIPF3-208ENST00000490447 HSPA1BP0DMV9 641 aaKnown RBP23.33■■□□□ 1.32
YIPF3-208ENST00000490447 GRIPAP1Q4V328 841 aa23.33■■□□□ 1.32
YIPF3-208ENST00000490447 PARP10Q53GL7 1025 aa23.33■■□□□ 1.32
YIPF3-208ENST00000490447 CLEC11AQ9Y240 323 aa23.33■■□□□ 1.32
YIPF3-208ENST00000490447 FZD9O00144 591 aa23.32■■□□□ 1.32
YIPF3-208ENST00000490447 NTSR2O95665 410 aa23.32■■□□□ 1.32
YIPF3-208ENST00000490447 HOXA10P31260 410 aaPredicted RBP23.32■■□□□ 1.32
YIPF3-208ENST00000490447 TMX4Q9H1E5 349 aaPredicted RBP23.32■■□□□ 1.32
YIPF3-208ENST00000490447 RNF123Q5XPI4 1314 aa23.31■■□□□ 1.32
YIPF3-208ENST00000490447 PPEF1O14829 653 aaPredicted RBP23.31■■□□□ 1.32
YIPF3-208ENST00000490447 EPHX2P34913 555 aa23.31■■□□□ 1.32
YIPF3-208ENST00000490447 TMPOP42166 694 aaKnown RBP23.31■■□□□ 1.32
YIPF3-208ENST00000490447 PNMA8AQ86V59 439 aaPredicted RBP23.31■■□□□ 1.32
YIPF3-208ENST00000490447 GPC2Q8N158 579 aa23.31■■□□□ 1.32
YIPF3-208ENST00000490447 MKRN1Q9UHC7 482 aaKnown RBP23.31■■□□□ 1.32
YIPF3-208ENST00000490447 EIF6P56537 245 aaKnown RBP23.3■■□□□ 1.32
YIPF3-208ENST00000490447 NLRP3Q96P20 1036 aa23.3■■□□□ 1.32
YIPF3-208ENST00000490447 CRAMP1Q96RY5 1269 aa23.3■■□□□ 1.32
YIPF3-208ENST00000490447 SNED1Q8TER0 1413 aa23.29■■□□□ 1.32
YIPF3-208ENST00000490447 TCERG1O14776 1098 aaKnown RBP23.29■■□□□ 1.32
YIPF3-208ENST00000490447 UTP14AQ9BVJ6 771 aaKnown RBP23.29■■□□□ 1.32
YIPF3-208ENST00000490447 PASKQ96RG2 1323 aa23.28■■□□□ 1.32
YIPF3-208ENST00000490447 MYBBP1AQ9BQG0 1328 aaKnown RBP23.28■■□□□ 1.32
YIPF3-208ENST00000490447 NEUROD2Q15784 382 aa23.28■■□□□ 1.32
YIPF3-208ENST00000490447 TNS4Q8IZW8 715 aa23.28■■□□□ 1.32
YIPF3-208ENST00000490447 LARGE2Q8N3Y3 721 aa23.28■■□□□ 1.32
YIPF3-208ENST00000490447 GJA3Q9Y6H8 435 aa23.28■■□□□ 1.32
YIPF3-208ENST00000490447 ANXA1P04083 346 aa23.27■■□□□ 1.32
YIPF3-208ENST00000490447 PDIA6Q15084 440 aa23.27■■□□□ 1.32
YIPF3-208ENST00000490447 HSP90AB3PQ58FF7 597 aa23.27■■□□□ 1.32
YIPF3-208ENST00000490447 NECTIN2Q92692 538 aa23.27■■□□□ 1.32
YIPF3-208ENST00000490447 LMOD1P29536 600 aaPredicted RBP23.26■■□□□ 1.31
YIPF3-208ENST00000490447 AIMP1Q12904 312 aaKnown RBP23.26■■□□□ 1.31
YIPF3-208ENST00000490447 WDR43Q15061 677 aaKnown RBP eCLIP23.26■■□□□ 1.31
YIPF3-208ENST00000490447 PROSER3Q2NL68 480 aa23.26■■□□□ 1.31
YIPF3-208ENST00000490447 LRP10Q7Z4F1 713 aa23.26■■□□□ 1.31
YIPF3-208ENST00000490447 CCDC146Q8IYE0 955 aa23.26■■□□□ 1.31
YIPF3-208ENST00000490447 TMEM88BA6NKF7 163 aa23.25■■□□□ 1.31
YIPF3-208ENST00000490447 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
YIPF3-208ENST00000490447 CNTNAP1P78357 1384 aa23.24■■□□□ 1.31
YIPF3-208ENST00000490447 C3orf67Q6ZVT6 689 aa23.24■■□□□ 1.31
YIPF3-208ENST00000490447 COPS6Q7L5N1 327 aa23.24■■□□□ 1.31
YIPF3-208ENST00000490447 LAS1LQ9Y4W2 734 aaKnown RBP23.24■■□□□ 1.31
YIPF3-208ENST00000490447 ITGBL1O95965 494 aaPredicted RBP23.23■■□□□ 1.31
YIPF3-208ENST00000490447 NIM1KQ8IY84 436 aa23.23■■□□□ 1.31
YIPF3-208ENST00000490447 XAGE3Q8WTP9 111 aa23.23■■□□□ 1.31
YIPF3-208ENST00000490447 PPIP5K2O43314 1243 aa23.22■■□□□ 1.31
YIPF3-208ENST00000490447 SLC10A5Q5PT55 438 aa23.22■■□□□ 1.31
YIPF3-208ENST00000490447 MAP1SQ66K74 1059 aaPredicted RBP23.22■■□□□ 1.31
YIPF3-208ENST00000490447 CNTROBQ8N137 903 aa23.22■■□□□ 1.31
YIPF3-208ENST00000490447 RUNDC1Q96C34 613 aa23.22■■□□□ 1.31
YIPF3-208ENST00000490447 ATP6V0A2Q9Y487 856 aa23.22■■□□□ 1.31
YIPF3-208ENST00000490447 ABCC4O15439 1325 aa23.21■■□□□ 1.31
YIPF3-208ENST00000490447 DDX21Q9NR30 783 aaKnown RBP eCLIP23.21■■□□□ 1.31
YIPF3-208ENST00000490447 NLRP10Q86W26 655 aa23.2■■□□□ 1.3
YIPF3-208ENST00000490447 SUPT20HQ8NEM7 779 aa23.2■■□□□ 1.3
YIPF3-208ENST00000490447 TRMT112Q9UI30 125 aaKnown RBP23.2■■□□□ 1.3
YIPF3-208ENST00000490447 COL4A5P29400 1685 aa23.2■■□□□ 1.3
YIPF3-208ENST00000490447 ADAMTSL1Q8N6G6 1762 aa23.2■■□□□ 1.3
YIPF3-208ENST00000490447 CHL1O00533 1208 aa23.19■■□□□ 1.3
YIPF3-208ENST00000490447 CAPN15O75808 1086 aa23.19■■□□□ 1.3
YIPF3-208ENST00000490447 AOC3Q16853 763 aa23.19■■□□□ 1.3
YIPF3-208ENST00000490447 SLC51AQ86UW1 340 aa23.19■■□□□ 1.3
YIPF3-208ENST00000490447 VPS33BQ9H267 617 aa23.19■■□□□ 1.3
YIPF3-208ENST00000490447 HCLS1P14317 486 aaPredicted RBP23.18■■□□□ 1.3
YIPF3-208ENST00000490447 TCIRG1Q13488 830 aa23.18■■□□□ 1.3
YIPF3-208ENST00000490447 HDGFL1Q5TGJ6 251 aa23.18■■□□□ 1.3
YIPF3-208ENST00000490447 DDX46Q7L014 1031 aaKnown RBP23.18■■□□□ 1.3
YIPF3-208ENST00000490447 SH3TC1Q8TE82 1336 aa23.18■■□□□ 1.3
YIPF3-208ENST00000490447 BBOX1O75936 387 aa23.17■■□□□ 1.3
YIPF3-208ENST00000490447 SCNN1DP51172 638 aa23.17■■□□□ 1.3
YIPF3-208ENST00000490447 KRT24Q2M2I5 525 aa23.17■■□□□ 1.3
YIPF3-208ENST00000490447 DPP8Q6V1X1 898 aaPredicted RBP23.17■■□□□ 1.3
YIPF3-208ENST00000490447 AIDAQ96BJ3 306 aa23.17■■□□□ 1.3
YIPF3-208ENST00000490447 CHPF2Q9P2E5 772 aa23.17■■□□□ 1.3
YIPF3-208ENST00000490447 ANKRD36CQ5JPF3 1778 aa23.16■■□□□ 1.3
YIPF3-208ENST00000490447 VEGFBP49765 207 aa23.16■■□□□ 1.3
YIPF3-208ENST00000490447 TRIM35Q9UPQ4 493 aa23.16■■□□□ 1.3
YIPF3-208ENST00000490447 HOXB7P09629 217 aa23.15■■□□□ 1.3
YIPF3-208ENST00000490447 EPS15P42566 896 aa23.15■■□□□ 1.3
YIPF3-208ENST00000490447 USP50Q70EL3 339 aaPredicted RBP23.15■■□□□ 1.3
YIPF3-208ENST00000490447 SP8Q8IXZ3 490 aa23.15■■□□□ 1.3
YIPF3-208ENST00000490447 ABT1Q9ULW3 272 aaKnown RBP23.15■■□□□ 1.3
YIPF3-208ENST00000490447 MPNDQ8N594 471 aa23.14■■□□□ 1.3
YIPF3-208ENST00000490447 DBF4Q9UBU7 674 aaPredicted RBP23.14■■□□□ 1.3
YIPF3-208ENST00000490447 ADAMTS8Q9UP79 889 aa23.14■■□□□ 1.3
YIPF3-208ENST00000490447 GRAPQ13588 217 aa23.13■■□□□ 1.29
YIPF3-208ENST00000490447 DEFB115Q30KQ5 88 aa23.13■■□□□ 1.29
YIPF3-208ENST00000490447 GRAPLQ8TC17 118 aaPredicted RBP23.13■■□□□ 1.29
YIPF3-208ENST00000490447 RTFDC1Q9BY42 306 aaPredicted RBP23.13■■□□□ 1.29
YIPF3-208ENST00000490447 ZNRF3Q9ULT6 936 aa23.13■■□□□ 1.29
YIPF3-208ENST00000490447 RASSF10A6NK89 507 aa23.12■■□□□ 1.29
YIPF3-208ENST00000490447 ANKRD13DQ6ZTN6 518 aa23.12■■□□□ 1.29
YIPF3-208ENST00000490447 PLBD2Q8NHP8 589 aa23.12■■□□□ 1.29
YIPF3-208ENST00000490447 LTBP1Q14766 1721 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms