RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 PSMD1Q99460 953 aa16■□□□□ 0.15
OPTN-212ENST00000487935 CREBZFQ9NS37 354 aa16■□□□□ 0.15
OPTN-212ENST00000487935 PCNTO95613 3336 aa16■□□□□ 0.15
OPTN-212ENST00000487935 HOXA10P31260 410 aaPredicted RBP15.99■□□□□ 0.15
OPTN-212ENST00000487935 TMPOP42166 694 aaKnown RBP15.99■□□□□ 0.15
OPTN-212ENST00000487935 PARP10Q53GL7 1025 aa15.99■□□□□ 0.15
OPTN-212ENST00000487935 RBM17Q96I25 401 aaKnown RBP15.99■□□□□ 0.15
OPTN-212ENST00000487935 FZD9O00144 591 aa15.98■□□□□ 0.15
OPTN-212ENST00000487935 NTSR2O95665 410 aa15.98■□□□□ 0.15
OPTN-212ENST00000487935 GRIPAP1Q4V328 841 aa15.98■□□□□ 0.15
OPTN-212ENST00000487935 SNED1Q8TER0 1413 aa15.98■□□□□ 0.15
OPTN-212ENST00000487935 JDP2Q8WYK2 163 aa15.98■□□□□ 0.15
OPTN-212ENST00000487935 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
OPTN-212ENST00000487935 PRKRIP1Q9H875 184 aaPredicted RBP15.98■□□□□ 0.15
OPTN-212ENST00000487935 HACL1Q9UJ83 578 aa15.98■□□□□ 0.15
OPTN-212ENST00000487935 HSPA1AP0DMV8 641 aaKnown RBP15.97■□□□□ 0.15
OPTN-212ENST00000487935 HSPA1BP0DMV9 641 aaKnown RBP15.97■□□□□ 0.15
OPTN-212ENST00000487935 PDIA6Q15084 440 aa15.97■□□□□ 0.15
OPTN-212ENST00000487935 EAPPQ56P03 285 aaPredicted RBP15.97■□□□□ 0.15
OPTN-212ENST00000487935 COL13A1Q5TAT6 717 aaPredicted RBP15.97■□□□□ 0.15
OPTN-212ENST00000487935 LRP10Q7Z4F1 713 aa15.97■□□□□ 0.15
OPTN-212ENST00000487935 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
OPTN-212ENST00000487935 MYBBP1AQ9BQG0 1328 aaKnown RBP15.96■□□□□ 0.15
OPTN-212ENST00000487935 EPHX2P34913 555 aa15.96■□□□□ 0.15
OPTN-212ENST00000487935 GPC2Q8N158 579 aa15.96■□□□□ 0.15
OPTN-212ENST00000487935 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
OPTN-212ENST00000487935 PASKQ96RG2 1323 aa15.95■□□□□ 0.14
OPTN-212ENST00000487935 PPEF1O14829 653 aaPredicted RBP15.95■□□□□ 0.14
OPTN-212ENST00000487935 ANXA1P04083 346 aa15.95■□□□□ 0.14
OPTN-212ENST00000487935 EIF6P56537 245 aaKnown RBP15.95■□□□□ 0.14
OPTN-212ENST00000487935 NEUROD2Q15784 382 aa15.95■□□□□ 0.14
OPTN-212ENST00000487935 PROSER3Q2NL68 480 aa15.95■□□□□ 0.14
OPTN-212ENST00000487935 DIEXFQ68CQ4 756 aaKnown RBP15.95■□□□□ 0.14
OPTN-212ENST00000487935 PNMA8AQ86V59 439 aaPredicted RBP15.95■□□□□ 0.14
OPTN-212ENST00000487935 UTP14AQ9BVJ6 771 aaKnown RBP15.95■□□□□ 0.14
OPTN-212ENST00000487935 TMX4Q9H1E5 349 aaPredicted RBP15.95■□□□□ 0.14
OPTN-212ENST00000487935 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
OPTN-212ENST00000487935 RNF123Q5XPI4 1314 aa15.94■□□□□ 0.14
OPTN-212ENST00000487935 TCERG1O14776 1098 aaKnown RBP15.94■□□□□ 0.14
OPTN-212ENST00000487935 HSP90AB3PQ58FF7 597 aa15.94■□□□□ 0.14
OPTN-212ENST00000487935 SLC10A5Q5PT55 438 aa15.94■□□□□ 0.14
OPTN-212ENST00000487935 C3orf67Q6ZVT6 689 aa15.94■□□□□ 0.14
OPTN-212ENST00000487935 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
OPTN-212ENST00000487935 NECTIN2Q92692 538 aa15.94■□□□□ 0.14
OPTN-212ENST00000487935 ITGBL1O95965 494 aaPredicted RBP15.93■□□□□ 0.14
OPTN-212ENST00000487935 AIMP1Q12904 312 aaKnown RBP15.93■□□□□ 0.14
OPTN-212ENST00000487935 WDR43Q15061 677 aaKnown RBP eCLIP15.93■□□□□ 0.14
OPTN-212ENST00000487935 COPS6Q7L5N1 327 aa15.93■□□□□ 0.14
OPTN-212ENST00000487935 LARGE2Q8N3Y3 721 aa15.93■□□□□ 0.14
OPTN-212ENST00000487935 RUNDC1Q96C34 613 aa15.93■□□□□ 0.14
OPTN-212ENST00000487935 GJA3Q9Y6H8 435 aa15.93■□□□□ 0.14
OPTN-212ENST00000487935 ANKRD36CQ5JPF3 1778 aa15.92■□□□□ 0.14
OPTN-212ENST00000487935 ADAMTSL1Q8N6G6 1762 aa15.92■□□□□ 0.14
OPTN-212ENST00000487935 CNTNAP1P78357 1384 aa15.92■□□□□ 0.14
OPTN-212ENST00000487935 TMEM88BA6NKF7 163 aa15.92■□□□□ 0.14
OPTN-212ENST00000487935 CHL1O00533 1208 aa15.92■□□□□ 0.14
OPTN-212ENST00000487935 XAGE3Q8WTP9 111 aa15.92■□□□□ 0.14
OPTN-212ENST00000487935 DDX21Q9NR30 783 aaKnown RBP eCLIP15.92■□□□□ 0.14
OPTN-212ENST00000487935 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
OPTN-212ENST00000487935 COL4A5P29400 1685 aa15.92■□□□□ 0.14
OPTN-212ENST00000487935 LMOD1P29536 600 aaPredicted RBP15.91■□□□□ 0.14
OPTN-212ENST00000487935 NLRP10Q86W26 655 aa15.91■□□□□ 0.14
OPTN-212ENST00000487935 NIM1KQ8IY84 436 aa15.91■□□□□ 0.14
OPTN-212ENST00000487935 TNS4Q8IZW8 715 aa15.91■□□□□ 0.14
OPTN-212ENST00000487935 ATP6V0A2Q9Y487 856 aa15.91■□□□□ 0.14
OPTN-212ENST00000487935 TCIRG1Q13488 830 aa15.9■□□□□ 0.14
OPTN-212ENST00000487935 SLC51AQ86UW1 340 aa15.9■□□□□ 0.14
OPTN-212ENST00000487935 CNTROBQ8N137 903 aa15.9■□□□□ 0.14
OPTN-212ENST00000487935 VPS33BQ9H267 617 aa15.9■□□□□ 0.14
OPTN-212ENST00000487935 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
OPTN-212ENST00000487935 ABCC4O15439 1325 aa15.9■□□□□ 0.14
OPTN-212ENST00000487935 PPIP5K2O43314 1243 aa15.89■□□□□ 0.13
OPTN-212ENST00000487935 BBOX1O75936 387 aa15.89■□□□□ 0.13
OPTN-212ENST00000487935 KRT24Q2M2I5 525 aa15.89■□□□□ 0.13
OPTN-212ENST00000487935 MAP1SQ66K74 1059 aaPredicted RBP15.89■□□□□ 0.13
OPTN-212ENST00000487935 SUPT20HQ8NEM7 779 aa15.89■□□□□ 0.13
OPTN-212ENST00000487935 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
OPTN-212ENST00000487935 LAMB2P55268 1798 aa15.88■□□□□ 0.13
OPTN-212ENST00000487935 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
OPTN-212ENST00000487935 AOC3Q16853 763 aa15.88■□□□□ 0.13
OPTN-212ENST00000487935 HDGFL1Q5TGJ6 251 aa15.88■□□□□ 0.13
OPTN-212ENST00000487935 CHPF2Q9P2E5 772 aa15.88■□□□□ 0.13
OPTN-212ENST00000487935 ADAMTS8Q9UP79 889 aa15.88■□□□□ 0.13
OPTN-212ENST00000487935 SH3TC1Q8TE82 1336 aa15.88■□□□□ 0.13
OPTN-212ENST00000487935 LTBP1Q14766 1721 aa15.88■□□□□ 0.13
OPTN-212ENST00000487935 HOXB7P09629 217 aa15.87■□□□□ 0.13
OPTN-212ENST00000487935 EPS15P42566 896 aa15.87■□□□□ 0.13
OPTN-212ENST00000487935 SCNN1DP51172 638 aa15.87■□□□□ 0.13
OPTN-212ENST00000487935 DPP8Q6V1X1 898 aaPredicted RBP15.87■□□□□ 0.13
OPTN-212ENST00000487935 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
OPTN-212ENST00000487935 SP8Q8IXZ3 490 aa15.87■□□□□ 0.13
OPTN-212ENST00000487935 RTFDC1Q9BY42 306 aaPredicted RBP15.87■□□□□ 0.13
OPTN-212ENST00000487935 VEGFBP49765 207 aa15.86■□□□□ 0.13
OPTN-212ENST00000487935 GRAPQ13588 217 aa15.86■□□□□ 0.13
OPTN-212ENST00000487935 USP50Q70EL3 339 aaPredicted RBP15.86■□□□□ 0.13
OPTN-212ENST00000487935 MPNDQ8N594 471 aa15.86■□□□□ 0.13
OPTN-212ENST00000487935 PLBD2Q8NHP8 589 aa15.86■□□□□ 0.13
OPTN-212ENST00000487935 GRAPLQ8TC17 118 aaPredicted RBP15.86■□□□□ 0.13
OPTN-212ENST00000487935 DBF4Q9UBU7 674 aaPredicted RBP15.86■□□□□ 0.13
OPTN-212ENST00000487935 DEFB115Q30KQ5 88 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms