RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 RACK1P63244 317 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 RASSF7Q02833 373 aa6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 C16orf46Q6P387 395 aa6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 ZBTB33Q86T24 672 aa6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 DZIP3Q86Y13 1208 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 GPATCH11Q8N954 259 aa6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 SLC16A10Q8TF71 515 aa6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 PCDHGB7Q9Y5F8 929 aa6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 PPFIA4O75335 1185 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 AVPP01185 164 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 SLC10A3P09131 477 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 CTHP32929 405 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 EIF1AXP47813 144 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 CNGB1Q14028 1251 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 FAM50AQ14320 339 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 PTPRNQ16849 979 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 WDR78Q5VTH9 848 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 RASGRP4Q8TDF6 673 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 MAF1Q9H063 256 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 SRA1Q9HD15 236 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 HOMER2Q9NSB8 354 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 PRR12Q9ULL5 1215 aa6.69□□□□□ -1.34
R3HDM1-216ENST00000483065 BACH1O14867 736 aa6.68□□□□□ -1.34
R3HDM1-216ENST00000483065 F12P00748 615 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-216ENST00000483065 PCSK2P16519 638 aa6.68□□□□□ -1.34
R3HDM1-216ENST00000483065 PAK2Q13177 524 aa6.68□□□□□ -1.34
R3HDM1-216ENST00000483065 SYMPKQ92797 1274 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-216ENST00000483065 ARHGAP9Q9BRR9 750 aa6.68□□□□□ -1.34
R3HDM1-216ENST00000483065 NIF3L1Q9GZT8 377 aa6.68□□□□□ -1.34
R3HDM1-216ENST00000483065 NEUROD4Q9HD90 331 aa6.68□□□□□ -1.34
R3HDM1-216ENST00000483065 STIM2Q9P246 746 aa6.68□□□□□ -1.34
R3HDM1-216ENST00000483065 WDHD1O75717 1129 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 IGHA1P01876 353 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 KRT18P05783 430 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 CFHP08603 1231 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 AMPD3Q01432 767 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 UBE4AQ14139 1066 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 BRD3Q15059 726 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 NBPF20Q3BBV1 942 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 SWT1Q5T5J6 900 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 ZNF697Q5TEC3 545 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 TTC16Q8NEE8 873 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 DEPDC7Q96QD5 511 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 FANCLQ9NW38 375 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 WWC3Q9ULE0 1092 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 PCDHGA11Q9Y5H2 935 aa6.67□□□□□ -1.34
R3HDM1-216ENST00000483065 A0A0U1RQG5 324 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 GPR182O15218 404 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 MYCP01106 439 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 COL9A1P20849 921 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 PAX3P23760 479 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 NOS2P35228 1153 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 ST13P50502 369 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 PPP4CP60510 307 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 EXOSC10Q01780 885 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 IFRD2Q12894 506 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 COL9A2Q14055 689 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 PPP2R5AQ15172 486 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 NME8Q8N427 588 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 TSEN2Q8NCE0 465 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 ADAM32Q8TC27 787 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 TRPM4Q8TD43 1214 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 STAG1Q8WVM7 1258 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 SGSM3Q96HU1 749 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 DNAJC25Q9H1X3 360 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 ESF1Q9H501 851 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 JADE2Q9NQC1 790 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 KIAA1468Q9P260 1216 aa6.66□□□□□ -1.34
R3HDM1-216ENST00000483065 FZD6O60353 706 aa6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 LIG1P18858 919 aa6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 PWP1Q13610 501 aa6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 TAF1CQ15572 869 aaPredicted RBP6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 VPS72Q15906 364 aa6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 TMTC2Q8N394 836 aa6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 SYNPOQ8N3V7 929 aa6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 SAMD3Q8N6K7 520 aa6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 FEZ1Q99689 392 aa6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 USB1Q9BQ65 265 aaKnown RBP6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 SENP7Q9BQF6 1050 aa6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 PRR14Q9BWN1 585 aa6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 SEPT9Q9UHD8 586 aaPredicted RBP6.65□□□□□ -1.34
R3HDM1-216ENST00000483065 VIL1P09327 827 aaKnown RBP6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 MZF1P28698 734 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 GYS2P54840 703 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 RAB33AQ14088 237 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 CTC1Q2NKJ3 1217 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 GPAT2Q6NUI2 795 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 ANKS3Q6ZW76 656 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 CSRNP1Q96S65 589 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 ZNF408Q9H9D4 720 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 GNL3LQ9NVN8 582 aaKnown RBP6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 SNTG2Q9NY99 539 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 SWAP70Q9UH65 585 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 CHMP3Q9Y3E7 222 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 SALL2Q9Y467 1007 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 USP31Q70CQ4 1352 aa6.64□□□□□ -1.35
R3HDM1-216ENST00000483065 ESPNB1AK53 854 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 ALG1L2C9J202 215 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 SMAPO00193 183 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms