RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
R3HDM1-216ENST00000483065 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
R3HDM1-216ENST00000483065 POTEDQ86YR6 584 aa18.07■□□□□ 0.48
R3HDM1-216ENST00000483065 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
R3HDM1-216ENST00000483065 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
R3HDM1-216ENST00000483065 FOXD1Q16676 465 aa16.43■□□□□ 0.22
R3HDM1-216ENST00000483065 MSH5O43196 834 aa15.92■□□□□ 0.14
R3HDM1-216ENST00000483065 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
R3HDM1-216ENST00000483065 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
R3HDM1-216ENST00000483065 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
R3HDM1-216ENST00000483065 ADRA2BP18089 450 aa14.07□□□□□ -0.16
R3HDM1-216ENST00000483065 POTEHQ6S545 545 aa13.87□□□□□ -0.19
R3HDM1-216ENST00000483065 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
R3HDM1-216ENST00000483065 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
R3HDM1-216ENST00000483065 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
R3HDM1-216ENST00000483065 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
R3HDM1-216ENST00000483065 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
R3HDM1-216ENST00000483065 DCAF8L1A6NGE4 600 aa13.05□□□□□ -0.32
R3HDM1-216ENST00000483065 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
R3HDM1-216ENST00000483065 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
R3HDM1-216ENST00000483065 DNAJC5BQ9UF47 199 aa12.4□□□□□ -0.42
R3HDM1-216ENST00000483065 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
R3HDM1-216ENST00000483065 DSG3P32926 999 aa12.12□□□□□ -0.47
R3HDM1-216ENST00000483065 PLSCR2Q9NRY7 297 aa12.01□□□□□ -0.49
R3HDM1-216ENST00000483065 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
R3HDM1-216ENST00000483065 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
R3HDM1-216ENST00000483065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.88□□□□□ -0.51
R3HDM1-216ENST00000483065 CAPN15O75808 1086 aa11.79□□□□□ -0.52
R3HDM1-216ENST00000483065 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
R3HDM1-216ENST00000483065 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
R3HDM1-216ENST00000483065 PPP4R3CPQ6ZMV5 832 aa11.6□□□□□ -0.55
R3HDM1-216ENST00000483065 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
R3HDM1-216ENST00000483065 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
R3HDM1-216ENST00000483065 LHX8Q68G74 356 aa11.51□□□□□ -0.57
R3HDM1-216ENST00000483065 HAX1O00165 279 aa11.5□□□□□ -0.57
R3HDM1-216ENST00000483065 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
R3HDM1-216ENST00000483065 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
R3HDM1-216ENST00000483065 ABCB7O75027 752 aa11.39□□□□□ -0.59
R3HDM1-216ENST00000483065 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
R3HDM1-216ENST00000483065 EVX2Q03828 476 aa11.28□□□□□ -0.6
R3HDM1-216ENST00000483065 TRHP20396 242 aaPredicted RBP11.25□□□□□ -0.61
R3HDM1-216ENST00000483065 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
R3HDM1-216ENST00000483065 KCNA4P22459 653 aa11.03□□□□□ -0.64
R3HDM1-216ENST00000483065 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.65
R3HDM1-216ENST00000483065 AKT1S1Q96B36 256 aa11□□□□□ -0.65
R3HDM1-216ENST00000483065 APLP2Q06481 763 aa10.98□□□□□ -0.65
R3HDM1-216ENST00000483065 POTEMA6NI47 508 aa10.93□□□□□ -0.66
R3HDM1-216ENST00000483065 GABBR2O75899 941 aa10.93□□□□□ -0.66
R3HDM1-216ENST00000483065 CSRNP3Q8WYN3 585 aa10.92□□□□□ -0.66
R3HDM1-216ENST00000483065 AMER1Q5JTC6 1135 aaPredicted RBP10.9□□□□□ -0.66
R3HDM1-216ENST00000483065 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
R3HDM1-216ENST00000483065 PCDH10Q9P2E7 1040 aa10.84□□□□□ -0.67
R3HDM1-216ENST00000483065 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
R3HDM1-216ENST00000483065 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
R3HDM1-216ENST00000483065 PITPNM1O00562 1244 aa10.8□□□□□ -0.68
R3HDM1-216ENST00000483065 C19orf67A6NJJ6 358 aa10.72□□□□□ -0.69
R3HDM1-216ENST00000483065 POTEIP0CG38 1075 aa10.71□□□□□ -0.69
R3HDM1-216ENST00000483065 NCBP3Q53F19 620 aaKnown RBP10.69□□□□□ -0.7
R3HDM1-216ENST00000483065 RTN4Q9NQC3 1192 aaKnown RBP10.68□□□□□ -0.7
R3HDM1-216ENST00000483065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
R3HDM1-216ENST00000483065 POLA2Q14181 598 aa10.63□□□□□ -0.71
R3HDM1-216ENST00000483065 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
R3HDM1-216ENST00000483065 OTUD5Q96G74 571 aa10.58□□□□□ -0.72
R3HDM1-216ENST00000483065 NPM3O75607 178 aaKnown RBP10.57□□□□□ -0.72
R3HDM1-216ENST00000483065 PRKAR2AP13861 404 aaKnown RBP10.5□□□□□ -0.73
R3HDM1-216ENST00000483065 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
R3HDM1-216ENST00000483065 SLC4A2P04920 1241 aa10.49□□□□□ -0.73
R3HDM1-216ENST00000483065 OSCARQ8IYS5 282 aa10.34□□□□□ -0.75
R3HDM1-216ENST00000483065 POTEB2H3BUK9 544 aa10.32□□□□□ -0.76
R3HDM1-216ENST00000483065 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
R3HDM1-216ENST00000483065 LCE2DQ5TA82 110 aaPredicted RBP10.28□□□□□ -0.76
R3HDM1-216ENST00000483065 ZBTB12Q9Y330 459 aaPredicted RBP10.28□□□□□ -0.76
R3HDM1-216ENST00000483065 CLCN6P51797 869 aa10.25□□□□□ -0.77
R3HDM1-216ENST00000483065 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
R3HDM1-216ENST00000483065 CDAN1Q8IWY9 1227 aa10.09□□□□□ -0.79
R3HDM1-216ENST00000483065 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
R3HDM1-216ENST00000483065 CD44P16070 742 aaKnown RBP10.08□□□□□ -0.8
R3HDM1-216ENST00000483065 ZBTB22O15209 634 aa10.07□□□□□ -0.8
R3HDM1-216ENST00000483065 CHADLQ6NUI6 762 aa10.07□□□□□ -0.8
R3HDM1-216ENST00000483065 MMRN1Q13201 1228 aa10.03□□□□□ -0.8
R3HDM1-216ENST00000483065 SPDYE1Q8NFV5 336 aaPredicted RBP10.03□□□□□ -0.8
R3HDM1-216ENST00000483065 BCANQ96GW7 911 aa10.03□□□□□ -0.8
R3HDM1-216ENST00000483065 FOXD4L1Q9NU39 408 aa10.01□□□□□ -0.81
R3HDM1-216ENST00000483065 DAXXQ9UER7 740 aaPredicted RBP9.95□□□□□ -0.82
R3HDM1-216ENST00000483065 POTEJP0CG39 1038 aa9.93□□□□□ -0.82
R3HDM1-216ENST00000483065 FKBP8Q14318 412 aa9.9□□□□□ -0.82
R3HDM1-216ENST00000483065 PLCB2Q00722 1185 aa9.89□□□□□ -0.83
R3HDM1-216ENST00000483065 MAMSTRQ6ZN01 415 aa9.89□□□□□ -0.83
R3HDM1-216ENST00000483065 SPNS2Q8IVW8 549 aa9.89□□□□□ -0.83
R3HDM1-216ENST00000483065 ZNF579Q8NAF0 562 aaKnown RBP9.86□□□□□ -0.83
R3HDM1-216ENST00000483065 SPDYE2BA6NHP3 402 aa9.85□□□□□ -0.83
R3HDM1-216ENST00000483065 GALR2O43603 387 aaPredicted RBP9.85□□□□□ -0.83
R3HDM1-216ENST00000483065 SPDYE6P0CI01 402 aa9.85□□□□□ -0.83
R3HDM1-216ENST00000483065 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
R3HDM1-216ENST00000483065 TAOK2Q9UL54 1235 aa9.83□□□□□ -0.84
R3HDM1-216ENST00000483065 PELP1Q8IZL8 1130 aaKnown RBP9.81□□□□□ -0.84
R3HDM1-216ENST00000483065 ERICH6Q7L0X2 663 aa9.8□□□□□ -0.84
R3HDM1-216ENST00000483065 MYCNP04198 464 aaPredicted RBP9.79□□□□□ -0.84
R3HDM1-216ENST00000483065 ARXQ96QS3 562 aa9.79□□□□□ -0.84
R3HDM1-216ENST00000483065 HAP1P54257 671 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms