RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 LRP10Q7Z4F1 713 aa25.37■■□□□ 1.65
CHPF2-203ENST00000482173 CCDC146Q8IYE0 955 aa25.37■■□□□ 1.65
CHPF2-203ENST00000482173 RIC1Q4ADV7 1423 aa25.37■■□□□ 1.65
CHPF2-203ENST00000482173 MYBBP1AQ9BQG0 1328 aaKnown RBP25.37■■□□□ 1.65
CHPF2-203ENST00000482173 SCN4AP35499 1836 aa25.36■■□□□ 1.65
CHPF2-203ENST00000482173 PROSER3Q2NL68 480 aa25.36■■□□□ 1.65
CHPF2-203ENST00000482173 PARP10Q53GL7 1025 aa25.36■■□□□ 1.65
CHPF2-203ENST00000482173 RBM17Q96I25 401 aaKnown RBP25.36■■□□□ 1.65
CHPF2-203ENST00000482173 PSMD1Q99460 953 aa25.36■■□□□ 1.65
CHPF2-203ENST00000482173 FZD9O00144 591 aa25.35■■□□□ 1.65
CHPF2-203ENST00000482173 LDHDQ86WU2 507 aa25.35■■□□□ 1.65
CHPF2-203ENST00000482173 JDP2Q8WYK2 163 aa25.35■■□□□ 1.65
CHPF2-203ENST00000482173 NECTIN2Q92692 538 aa25.35■■□□□ 1.65
CHPF2-203ENST00000482173 CRAMP1Q96RY5 1269 aa25.35■■□□□ 1.65
CHPF2-203ENST00000482173 HACL1Q9UJ83 578 aa25.34■■□□□ 1.65
CHPF2-203ENST00000482173 TCERG1O14776 1098 aaKnown RBP25.33■■□□□ 1.65
CHPF2-203ENST00000482173 EAPPQ56P03 285 aaPredicted RBP25.33■■□□□ 1.65
CHPF2-203ENST00000482173 C3orf67Q6ZVT6 689 aa25.33■■□□□ 1.65
CHPF2-203ENST00000482173 SNED1Q8TER0 1413 aa25.33■■□□□ 1.65
CHPF2-203ENST00000482173 NLRP3Q96P20 1036 aa25.33■■□□□ 1.65
CHPF2-203ENST00000482173 UTP14AQ9BVJ6 771 aaKnown RBP25.33■■□□□ 1.65
CHPF2-203ENST00000482173 CREBZFQ9NS37 354 aa25.33■■□□□ 1.65
CHPF2-203ENST00000482173 AIMP1Q12904 312 aaKnown RBP25.32■■□□□ 1.64
CHPF2-203ENST00000482173 GRIPAP1Q4V328 841 aa25.32■■□□□ 1.64
CHPF2-203ENST00000482173 COPS6Q7L5N1 327 aa25.32■■□□□ 1.64
CHPF2-203ENST00000482173 LAS1LQ9Y4W2 734 aaKnown RBP25.32■■□□□ 1.64
CHPF2-203ENST00000482173 PPEF1O14829 653 aaPredicted RBP25.31■■□□□ 1.64
CHPF2-203ENST00000482173 EPHX2P34913 555 aa25.31■■□□□ 1.64
CHPF2-203ENST00000482173 WDR43Q15061 677 aaKnown RBP eCLIP25.31■■□□□ 1.64
CHPF2-203ENST00000482173 SLC10A5Q5PT55 438 aa25.31■■□□□ 1.64
CHPF2-203ENST00000482173 COL13A1Q5TAT6 717 aaPredicted RBP25.31■■□□□ 1.64
CHPF2-203ENST00000482173 XAGE3Q8WTP9 111 aa25.31■■□□□ 1.64
CHPF2-203ENST00000482173 RUNDC1Q96C34 613 aa25.31■■□□□ 1.64
CHPF2-203ENST00000482173 CLEC11AQ9Y240 323 aa25.31■■□□□ 1.64
CHPF2-203ENST00000482173 CHL1O00533 1208 aa25.3■■□□□ 1.64
CHPF2-203ENST00000482173 GPC2Q8N158 579 aa25.3■■□□□ 1.64
CHPF2-203ENST00000482173 RNF123Q5XPI4 1314 aa25.3■■□□□ 1.64
CHPF2-203ENST00000482173 EIF6P56537 245 aaKnown RBP25.29■■□□□ 1.64
CHPF2-203ENST00000482173 KRT24Q2M2I5 525 aa25.29■■□□□ 1.64
CHPF2-203ENST00000482173 HSP90AB3PQ58FF7 597 aa25.29■■□□□ 1.64
CHPF2-203ENST00000482173 SLC51AQ86UW1 340 aa25.29■■□□□ 1.64
CHPF2-203ENST00000482173 MKRN1Q9UHC7 482 aaKnown RBP25.29■■□□□ 1.64
CHPF2-203ENST00000482173 TRIM35Q9UPQ4 493 aa25.29■■□□□ 1.64
CHPF2-203ENST00000482173 HSPA1AP0DMV8 641 aaKnown RBP25.28■■□□□ 1.64
CHPF2-203ENST00000482173 HSPA1BP0DMV9 641 aaKnown RBP25.28■■□□□ 1.64
CHPF2-203ENST00000482173 PNMA8AQ86V59 439 aaPredicted RBP25.28■■□□□ 1.64
CHPF2-203ENST00000482173 LARGE2Q8N3Y3 721 aa25.28■■□□□ 1.64
CHPF2-203ENST00000482173 TMX4Q9H1E5 349 aaPredicted RBP25.28■■□□□ 1.64
CHPF2-203ENST00000482173 DDX21Q9NR30 783 aaKnown RBP eCLIP25.28■■□□□ 1.64
CHPF2-203ENST00000482173 GJA3Q9Y6H8 435 aa25.28■■□□□ 1.64
CHPF2-203ENST00000482173 PASKQ96RG2 1323 aa25.28■■□□□ 1.64
CHPF2-203ENST00000482173 ITGBL1O95965 494 aaPredicted RBP25.27■■□□□ 1.64
CHPF2-203ENST00000482173 NLRP10Q86W26 655 aa25.27■■□□□ 1.64
CHPF2-203ENST00000482173 ADAMTS8Q9UP79 889 aa25.27■■□□□ 1.64
CHPF2-203ENST00000482173 TCIRG1Q13488 830 aa25.26■■□□□ 1.63
CHPF2-203ENST00000482173 COL4A5P29400 1685 aa25.26■■□□□ 1.63
CHPF2-203ENST00000482173 HCLS1P14317 486 aaPredicted RBP25.25■■□□□ 1.63
CHPF2-203ENST00000482173 ATP6V0A2Q9Y487 856 aa25.25■■□□□ 1.63
CHPF2-203ENST00000482173 PCNTO95613 3336 aa25.25■■□□□ 1.63
CHPF2-203ENST00000482173 CHPF2Q9P2E5 772 aa25.24■■□□□ 1.63
CHPF2-203ENST00000482173 TRMT112Q9UI30 125 aaKnown RBP25.24■■□□□ 1.63
CHPF2-203ENST00000482173 ABCC4O15439 1325 aa25.23■■□□□ 1.63
CHPF2-203ENST00000482173 ANKRD36CQ5JPF3 1778 aa25.23■■□□□ 1.63
CHPF2-203ENST00000482173 TMEM88BA6NKF7 163 aa25.22■■□□□ 1.63
CHPF2-203ENST00000482173 PPIP5K2O43314 1243 aa25.22■■□□□ 1.63
CHPF2-203ENST00000482173 BBOX1O75936 387 aa25.22■■□□□ 1.63
CHPF2-203ENST00000482173 LMOD1P29536 600 aaPredicted RBP25.22■■□□□ 1.63
CHPF2-203ENST00000482173 HDGFL1Q5TGJ6 251 aa25.22■■□□□ 1.63
CHPF2-203ENST00000482173 MAP1SQ66K74 1059 aaPredicted RBP25.22■■□□□ 1.63
CHPF2-203ENST00000482173 NIM1KQ8IY84 436 aa25.22■■□□□ 1.63
CHPF2-203ENST00000482173 CNTROBQ8N137 903 aa25.22■■□□□ 1.63
CHPF2-203ENST00000482173 SH3TC1Q8TE82 1336 aa25.21■■□□□ 1.63
CHPF2-203ENST00000482173 ADAMTSL1Q8N6G6 1762 aa25.21■■□□□ 1.63
CHPF2-203ENST00000482173 CNTNAP1P78357 1384 aa25.2■■□□□ 1.63
CHPF2-203ENST00000482173 AOC3Q16853 763 aa25.2■■□□□ 1.62
CHPF2-203ENST00000482173 SP8Q8IXZ3 490 aa25.2■■□□□ 1.62
CHPF2-203ENST00000482173 ZNF428Q96B54 188 aa25.2■■□□□ 1.62
CHPF2-203ENST00000482173 HOXB7P09629 217 aa25.19■■□□□ 1.62
CHPF2-203ENST00000482173 DDX46Q7L014 1031 aaKnown RBP25.19■■□□□ 1.62
CHPF2-203ENST00000482173 TNS4Q8IZW8 715 aa25.19■■□□□ 1.62
CHPF2-203ENST00000482173 SUPT20HQ8NEM7 779 aa25.19■■□□□ 1.62
CHPF2-203ENST00000482173 CFAP44Q96MT7 982 aa25.19■■□□□ 1.62
CHPF2-203ENST00000482173 VPS33BQ9H267 617 aa25.19■■□□□ 1.62
CHPF2-203ENST00000482173 EPS15P42566 896 aa25.18■■□□□ 1.62
CHPF2-203ENST00000482173 SCNN1DP51172 638 aa25.18■■□□□ 1.62
CHPF2-203ENST00000482173 ANKRD13DQ6ZTN6 518 aa25.18■■□□□ 1.62
CHPF2-203ENST00000482173 PLBD2Q8NHP8 589 aa25.18■■□□□ 1.62
CHPF2-203ENST00000482173 PRKRIP1Q9H875 184 aaPredicted RBP25.18■■□□□ 1.62
CHPF2-203ENST00000482173 DBF4Q9UBU7 674 aaPredicted RBP25.18■■□□□ 1.62
CHPF2-203ENST00000482173 LAMB2P55268 1798 aa25.18■■□□□ 1.62
CHPF2-203ENST00000482173 DPP8Q6V1X1 898 aaPredicted RBP25.17■■□□□ 1.62
CHPF2-203ENST00000482173 MPNDQ8N594 471 aa25.17■■□□□ 1.62
CHPF2-203ENST00000482173 RTFDC1Q9BY42 306 aaPredicted RBP25.17■■□□□ 1.62
CHPF2-203ENST00000482173 DUSP27Q5VZP5 1158 aa25.16■■□□□ 1.62
CHPF2-203ENST00000482173 ZNRF3Q9ULT6 936 aa25.16■■□□□ 1.62
CHPF2-203ENST00000482173 LTBP1Q14766 1721 aa25.15■■□□□ 1.62
CHPF2-203ENST00000482173 VEGFBP49765 207 aa25.15■■□□□ 1.62
CHPF2-203ENST00000482173 GRAPQ13588 217 aa25.15■■□□□ 1.62
CHPF2-203ENST00000482173 GRAPLQ8TC17 118 aaPredicted RBP25.15■■□□□ 1.62
CHPF2-203ENST00000482173 MBIPQ9NS73 344 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms