RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 PROSER3Q2NL68 480 aa21.99■■□□□ 1.11
TRIM13-208ENST00000478111 C3orf67Q6ZVT6 689 aa21.99■■□□□ 1.11
TRIM13-208ENST00000478111 BABAM1Q9NWV8 329 aa21.99■■□□□ 1.11
TRIM13-208ENST00000478111 ADAMTSL1Q8N6G6 1762 aa21.99■■□□□ 1.11
TRIM13-208ENST00000478111 SLC51AQ86UW1 340 aa21.98■■□□□ 1.11
TRIM13-208ENST00000478111 PASKQ96RG2 1323 aa21.98■■□□□ 1.11
TRIM13-208ENST00000478111 ANKRD36CQ5JPF3 1778 aa21.97■■□□□ 1.11
TRIM13-208ENST00000478111 ANXA1P04083 346 aa21.97■■□□□ 1.11
TRIM13-208ENST00000478111 EIF2S2P20042 333 aaKnown RBP21.97■■□□□ 1.11
TRIM13-208ENST00000478111 LDHDQ86WU2 507 aa21.97■■□□□ 1.11
TRIM13-208ENST00000478111 CREBZFQ9NS37 354 aa21.97■■□□□ 1.11
TRIM13-208ENST00000478111 CC2D2BQ6DHV5 1058 aa21.96■■□□□ 1.11
TRIM13-208ENST00000478111 RPGRQ92834 1020 aaKnown RBP21.96■■□□□ 1.11
TRIM13-208ENST00000478111 CRAMP1Q96RY5 1269 aa21.96■■□□□ 1.11
TRIM13-208ENST00000478111 LAMB2P55268 1798 aa21.95■■□□□ 1.1
TRIM13-208ENST00000478111 ITGBL1O95965 494 aaPredicted RBP21.95■■□□□ 1.1
TRIM13-208ENST00000478111 DDX10Q13206 875 aaKnown RBP21.95■■□□□ 1.1
TRIM13-208ENST00000478111 HACL1Q9UJ83 578 aa21.95■■□□□ 1.1
TRIM13-208ENST00000478111 PARP10Q53GL7 1025 aa21.94■■□□□ 1.1
TRIM13-208ENST00000478111 SLC10A5Q5PT55 438 aa21.94■■□□□ 1.1
TRIM13-208ENST00000478111 PPP1R42Q7Z4L9 355 aa21.94■■□□□ 1.1
TRIM13-208ENST00000478111 RBM17Q96I25 401 aaKnown RBP21.94■■□□□ 1.1
TRIM13-208ENST00000478111 HSPA1AP0DMV8 641 aaKnown RBP21.93■■□□□ 1.1
TRIM13-208ENST00000478111 HSPA1BP0DMV9 641 aaKnown RBP21.93■■□□□ 1.1
TRIM13-208ENST00000478111 LMOD3Q0VAK6 560 aa21.93■■□□□ 1.1
TRIM13-208ENST00000478111 RNF123Q5XPI4 1314 aa21.93■■□□□ 1.1
TRIM13-208ENST00000478111 CCDC146Q8IYE0 955 aa21.93■■□□□ 1.1
TRIM13-208ENST00000478111 GPC2Q8N158 579 aa21.93■■□□□ 1.1
TRIM13-208ENST00000478111 MYBBP1AQ9BQG0 1328 aaKnown RBP21.93■■□□□ 1.1
TRIM13-208ENST00000478111 LTBP1Q14766 1721 aa21.92■■□□□ 1.1
TRIM13-208ENST00000478111 CHL1O00533 1208 aa21.92■■□□□ 1.1
TRIM13-208ENST00000478111 EPHX2P34913 555 aa21.92■■□□□ 1.1
TRIM13-208ENST00000478111 COPS6Q7L5N1 327 aa21.92■■□□□ 1.1
TRIM13-208ENST00000478111 TRIM35Q9UPQ4 493 aa21.92■■□□□ 1.1
TRIM13-208ENST00000478111 PPEF1O14829 653 aaPredicted RBP21.91■■□□□ 1.1
TRIM13-208ENST00000478111 NEUROD2Q15784 382 aa21.91■■□□□ 1.1
TRIM13-208ENST00000478111 KRT24Q2M2I5 525 aa21.91■■□□□ 1.1
TRIM13-208ENST00000478111 GRIPAP1Q4V328 841 aa21.91■■□□□ 1.1
TRIM13-208ENST00000478111 EAPPQ56P03 285 aaPredicted RBP21.91■■□□□ 1.1
TRIM13-208ENST00000478111 JDP2Q8WYK2 163 aa21.91■■□□□ 1.1
TRIM13-208ENST00000478111 NECTIN2Q92692 538 aa21.91■■□□□ 1.1
TRIM13-208ENST00000478111 NLRP3Q96P20 1036 aa21.91■■□□□ 1.1
TRIM13-208ENST00000478111 UTP14AQ9BVJ6 771 aaKnown RBP21.91■■□□□ 1.1
TRIM13-208ENST00000478111 MKRN1Q9UHC7 482 aaKnown RBP21.91■■□□□ 1.1
TRIM13-208ENST00000478111 TCERG1O14776 1098 aaKnown RBP21.9■■□□□ 1.1
TRIM13-208ENST00000478111 XAGE3Q8WTP9 111 aa21.9■■□□□ 1.1
TRIM13-208ENST00000478111 TAF1P21675 1872 aa21.9■■□□□ 1.1
TRIM13-208ENST00000478111 PNMA8AQ86V59 439 aaPredicted RBP21.89■■□□□ 1.09
TRIM13-208ENST00000478111 NLRP10Q86W26 655 aa21.89■■□□□ 1.09
TRIM13-208ENST00000478111 DDX21Q9NR30 783 aaKnown RBP eCLIP21.89■■□□□ 1.09
TRIM13-208ENST00000478111 CNTNAP1P78357 1384 aa21.88■■□□□ 1.09
TRIM13-208ENST00000478111 AIMP1Q12904 312 aaKnown RBP21.88■■□□□ 1.09
TRIM13-208ENST00000478111 RUNDC1Q96C34 613 aa21.88■■□□□ 1.09
TRIM13-208ENST00000478111 CLEC11AQ9Y240 323 aa21.88■■□□□ 1.09
TRIM13-208ENST00000478111 ATP6V0A2Q9Y487 856 aa21.88■■□□□ 1.09
TRIM13-208ENST00000478111 ABCC4O15439 1325 aa21.87■■□□□ 1.09
TRIM13-208ENST00000478111 EIF6P56537 245 aaKnown RBP21.87■■□□□ 1.09
TRIM13-208ENST00000478111 TCIRG1Q13488 830 aa21.87■■□□□ 1.09
TRIM13-208ENST00000478111 MAP1SQ66K74 1059 aaPredicted RBP21.87■■□□□ 1.09
TRIM13-208ENST00000478111 LARGE2Q8N3Y3 721 aa21.87■■□□□ 1.09
TRIM13-208ENST00000478111 ADAMTS8Q9UP79 889 aa21.87■■□□□ 1.09
TRIM13-208ENST00000478111 GJA3Q9Y6H8 435 aa21.87■■□□□ 1.09
TRIM13-208ENST00000478111 HSP90AB3PQ58FF7 597 aa21.86■■□□□ 1.09
TRIM13-208ENST00000478111 CNTROBQ8N137 903 aa21.86■■□□□ 1.09
TRIM13-208ENST00000478111 TMEM88BA6NKF7 163 aa21.85■■□□□ 1.09
TRIM13-208ENST00000478111 HCLS1P14317 486 aaPredicted RBP21.85■■□□□ 1.09
TRIM13-208ENST00000478111 SCNN1DP51172 638 aa21.85■■□□□ 1.09
TRIM13-208ENST00000478111 DDX60Q8IY21 1712 aaKnown RBP21.84■■□□□ 1.09
TRIM13-208ENST00000478111 RTFDC1Q9BY42 306 aaPredicted RBP21.84■■□□□ 1.09
TRIM13-208ENST00000478111 CHPF2Q9P2E5 772 aa21.84■■□□□ 1.09
TRIM13-208ENST00000478111 LAS1LQ9Y4W2 734 aaKnown RBP21.84■■□□□ 1.09
TRIM13-208ENST00000478111 EPS15P42566 896 aa21.83■■□□□ 1.09
TRIM13-208ENST00000478111 AOC3Q16853 763 aa21.83■■□□□ 1.09
TRIM13-208ENST00000478111 TNS4Q8IZW8 715 aa21.83■■□□□ 1.09
TRIM13-208ENST00000478111 VPS33BQ9H267 617 aa21.83■■□□□ 1.09
TRIM13-208ENST00000478111 TRMT112Q9UI30 125 aaKnown RBP21.83■■□□□ 1.09
TRIM13-208ENST00000478111 PPIP5K2O43314 1243 aa21.82■■□□□ 1.08
TRIM13-208ENST00000478111 BBOX1O75936 387 aa21.82■■□□□ 1.08
TRIM13-208ENST00000478111 VEGFBP49765 207 aa21.82■■□□□ 1.08
TRIM13-208ENST00000478111 WDR43Q15061 677 aaKnown RBP eCLIP21.82■■□□□ 1.08
TRIM13-208ENST00000478111 SP8Q8IXZ3 490 aa21.82■■□□□ 1.08
TRIM13-208ENST00000478111 SH3TC1Q8TE82 1336 aa21.81■■□□□ 1.08
TRIM13-208ENST00000478111 HOXB7P09629 217 aa21.81■■□□□ 1.08
TRIM13-208ENST00000478111 NIM1KQ8IY84 436 aa21.81■■□□□ 1.08
TRIM13-208ENST00000478111 LMOD1P29536 600 aaPredicted RBP21.8■■□□□ 1.08
TRIM13-208ENST00000478111 HDGFL1Q5TGJ6 251 aa21.8■■□□□ 1.08
TRIM13-208ENST00000478111 PLBD2Q8NHP8 589 aa21.8■■□□□ 1.08
TRIM13-208ENST00000478111 ZNF428Q96B54 188 aa21.8■■□□□ 1.08
TRIM13-208ENST00000478111 CFAP44Q96MT7 982 aa21.8■■□□□ 1.08
TRIM13-208ENST00000478111 ISCA1Q9BUE6 129 aa21.8■■□□□ 1.08
TRIM13-208ENST00000478111 TRPM7Q96QT4 1865 aa21.79■■□□□ 1.08
TRIM13-208ENST00000478111 RASSF10A6NK89 507 aa21.79■■□□□ 1.08
TRIM13-208ENST00000478111 CXCL9Q07325 125 aa21.79■■□□□ 1.08
TRIM13-208ENST00000478111 ANKRD13DQ6ZTN6 518 aa21.79■■□□□ 1.08
TRIM13-208ENST00000478111 TMX4Q9H1E5 349 aaPredicted RBP21.79■■□□□ 1.08
TRIM13-208ENST00000478111 PRKRIP1Q9H875 184 aaPredicted RBP21.79■■□□□ 1.08
TRIM13-208ENST00000478111 LRRC37AA6NMS7 1700 aa21.79■■□□□ 1.08
TRIM13-208ENST00000478111 FOXN1O15353 648 aa21.78■■□□□ 1.08
TRIM13-208ENST00000478111 ZNF853P0CG23 659 aa21.78■■□□□ 1.08
TRIM13-208ENST00000478111 FMR1Q06787 632 aaKnown RBP eCLIP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms