RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 RNF123Q5XPI4 1314 aa17.49■□□□□ 0.39
HMGCS2-203ENST00000476640 SUSD4Q5VX71 490 aa17.49■□□□□ 0.39
HMGCS2-203ENST00000476640 SYNE4Q8N205 404 aa17.49■□□□□ 0.39
HMGCS2-203ENST00000476640 RUNDC1Q96C34 613 aa17.49■□□□□ 0.39
HMGCS2-203ENST00000476640 CRAMP1Q96RY5 1269 aa17.49■□□□□ 0.39
HMGCS2-203ENST00000476640 LAMB2P55268 1798 aa17.48■□□□□ 0.39
HMGCS2-203ENST00000476640 NTSR2O95665 410 aa17.48■□□□□ 0.39
HMGCS2-203ENST00000476640 HSP90AB3PQ58FF7 597 aa17.48■□□□□ 0.39
HMGCS2-203ENST00000476640 OLFM4Q6UX06 510 aa17.48■□□□□ 0.39
HMGCS2-203ENST00000476640 LDHDQ86WU2 507 aa17.48■□□□□ 0.39
HMGCS2-203ENST00000476640 NLRP3Q96P20 1036 aa17.48■□□□□ 0.39
HMGCS2-203ENST00000476640 PDIA6Q15084 440 aa17.47■□□□□ 0.39
HMGCS2-203ENST00000476640 NEUROD2Q15784 382 aa17.47■□□□□ 0.39
HMGCS2-203ENST00000476640 UTP14AQ9BVJ6 771 aaKnown RBP17.47■□□□□ 0.39
HMGCS2-203ENST00000476640 TAF1DQ9H5J8 278 aaPredicted RBP17.47■□□□□ 0.39
HMGCS2-203ENST00000476640 HACL1Q9UJ83 578 aa17.47■□□□□ 0.39
HMGCS2-203ENST00000476640 FZD9O00144 591 aa17.46■□□□□ 0.39
HMGCS2-203ENST00000476640 PPEF1O14829 653 aaPredicted RBP17.46■□□□□ 0.39
HMGCS2-203ENST00000476640 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
HMGCS2-203ENST00000476640 GPC2Q8N158 579 aa17.46■□□□□ 0.39
HMGCS2-203ENST00000476640 CREBZFQ9NS37 354 aa17.46■□□□□ 0.39
HMGCS2-203ENST00000476640 ZNF541Q9H0D2 1346 aa17.46■□□□□ 0.38
HMGCS2-203ENST00000476640 CHL1O00533 1208 aa17.45■□□□□ 0.38
HMGCS2-203ENST00000476640 EIF6P56537 245 aaKnown RBP17.45■□□□□ 0.38
HMGCS2-203ENST00000476640 LRP10Q7Z4F1 713 aa17.45■□□□□ 0.38
HMGCS2-203ENST00000476640 PNMA8AQ86V59 439 aaPredicted RBP17.45■□□□□ 0.38
HMGCS2-203ENST00000476640 DDX21Q9NR30 783 aaKnown RBP eCLIP17.45■□□□□ 0.38
HMGCS2-203ENST00000476640 SNED1Q8TER0 1413 aa17.45■□□□□ 0.38
HMGCS2-203ENST00000476640 PROSER3Q2NL68 480 aa17.44■□□□□ 0.38
HMGCS2-203ENST00000476640 EAPPQ56P03 285 aaPredicted RBP17.44■□□□□ 0.38
HMGCS2-203ENST00000476640 SLC10A5Q5PT55 438 aa17.44■□□□□ 0.38
HMGCS2-203ENST00000476640 COPS6Q7L5N1 327 aa17.44■□□□□ 0.38
HMGCS2-203ENST00000476640 LAS1LQ9Y4W2 734 aaKnown RBP17.44■□□□□ 0.38
HMGCS2-203ENST00000476640 ADAMTSL1Q8N6G6 1762 aa17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 ANXA1P04083 346 aa17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 HOXB7P09629 217 aa17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 POTEJP0CG39 1038 aa17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 EPHX2P34913 555 aa17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 AIMP1Q12904 312 aaKnown RBP17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 LARGE2Q8N3Y3 721 aa17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 XAGE3Q8WTP9 111 aa17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 CLEC11AQ9Y240 323 aa17.43■□□□□ 0.38
HMGCS2-203ENST00000476640 LMOD1P29536 600 aaPredicted RBP17.42■□□□□ 0.38
HMGCS2-203ENST00000476640 VPS33BQ9H267 617 aa17.42■□□□□ 0.38
HMGCS2-203ENST00000476640 TCIRG1Q13488 830 aa17.41■□□□□ 0.38
HMGCS2-203ENST00000476640 HDGFL1Q5TGJ6 251 aa17.41■□□□□ 0.38
HMGCS2-203ENST00000476640 NLRP10Q86W26 655 aa17.41■□□□□ 0.38
HMGCS2-203ENST00000476640 SUPT20HQ8NEM7 779 aa17.41■□□□□ 0.38
HMGCS2-203ENST00000476640 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
HMGCS2-203ENST00000476640 ADAMTS8Q9UP79 889 aa17.41■□□□□ 0.38
HMGCS2-203ENST00000476640 TRIM35Q9UPQ4 493 aa17.41■□□□□ 0.38
HMGCS2-203ENST00000476640 ATP6V0A2Q9Y487 856 aa17.41■□□□□ 0.38
HMGCS2-203ENST00000476640 PCNTO95613 3336 aa17.41■□□□□ 0.38
HMGCS2-203ENST00000476640 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
HMGCS2-203ENST00000476640 BBOX1O75936 387 aa17.4■□□□□ 0.38
HMGCS2-203ENST00000476640 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
HMGCS2-203ENST00000476640 DBF4Q9UBU7 674 aaPredicted RBP17.4■□□□□ 0.38
HMGCS2-203ENST00000476640 GJA3Q9Y6H8 435 aa17.4■□□□□ 0.38
HMGCS2-203ENST00000476640 SH3TC1Q8TE82 1336 aa17.4■□□□□ 0.38
HMGCS2-203ENST00000476640 PASKQ96RG2 1323 aa17.4■□□□□ 0.38
HMGCS2-203ENST00000476640 CALD1Q05682 793 aaKnown RBP17.39■□□□□ 0.37
HMGCS2-203ENST00000476640 C3orf67Q6ZVT6 689 aa17.39■□□□□ 0.37
HMGCS2-203ENST00000476640 DDX46Q7L014 1031 aaKnown RBP17.39■□□□□ 0.37
HMGCS2-203ENST00000476640 PLBD2Q8NHP8 589 aa17.39■□□□□ 0.37
HMGCS2-203ENST00000476640 CFAP44Q96MT7 982 aa17.39■□□□□ 0.37
HMGCS2-203ENST00000476640 PRKRIP1Q9H875 184 aaPredicted RBP17.39■□□□□ 0.37
HMGCS2-203ENST00000476640 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
HMGCS2-203ENST00000476640 TAF1P21675 1872 aa17.39■□□□□ 0.37
HMGCS2-203ENST00000476640 DDX60Q8IY21 1712 aaKnown RBP17.38■□□□□ 0.37
HMGCS2-203ENST00000476640 TRPM7Q96QT4 1865 aa17.38■□□□□ 0.37
HMGCS2-203ENST00000476640 TMEM88BA6NKF7 163 aa17.38■□□□□ 0.37
HMGCS2-203ENST00000476640 PPIP5K2O43314 1243 aa17.38■□□□□ 0.37
HMGCS2-203ENST00000476640 TMC4Q7Z404 712 aa17.38■□□□□ 0.37
HMGCS2-203ENST00000476640 HYPKQ9NX55 129 aa17.38■□□□□ 0.37
HMGCS2-203ENST00000476640 ABCC4O15439 1325 aa17.38■□□□□ 0.37
HMGCS2-203ENST00000476640 COL4A5P29400 1685 aa17.38■□□□□ 0.37
HMGCS2-203ENST00000476640 HSPA1AP0DMV8 641 aaKnown RBP17.37■□□□□ 0.37
HMGCS2-203ENST00000476640 HSPA1BP0DMV9 641 aaKnown RBP17.37■□□□□ 0.37
HMGCS2-203ENST00000476640 KRT24Q2M2I5 525 aa17.37■□□□□ 0.37
HMGCS2-203ENST00000476640 ANKRD13DQ6ZTN6 518 aa17.37■□□□□ 0.37
HMGCS2-203ENST00000476640 SP8Q8IXZ3 490 aa17.37■□□□□ 0.37
HMGCS2-203ENST00000476640 MKRN1Q9UHC7 482 aaKnown RBP17.37■□□□□ 0.37
HMGCS2-203ENST00000476640 LRRC37AA6NMS7 1700 aa17.36■□□□□ 0.37
HMGCS2-203ENST00000476640 ITGBL1O95965 494 aaPredicted RBP17.36■□□□□ 0.37
HMGCS2-203ENST00000476640 HCLS1P14317 486 aaPredicted RBP17.36■□□□□ 0.37
HMGCS2-203ENST00000476640 DPP8Q6V1X1 898 aaPredicted RBP17.36■□□□□ 0.37
HMGCS2-203ENST00000476640 CNTROBQ8N137 903 aa17.36■□□□□ 0.37
HMGCS2-203ENST00000476640 CHMP4AQ9BY43 222 aa17.36■□□□□ 0.37
HMGCS2-203ENST00000476640 CNTNAP1P78357 1384 aa17.36■□□□□ 0.37
HMGCS2-203ENST00000476640 GNAI1P63096 354 aa17.35■□□□□ 0.37
HMGCS2-203ENST00000476640 AOC3Q16853 763 aa17.35■□□□□ 0.37
HMGCS2-203ENST00000476640 COL13A1Q5TAT6 717 aaPredicted RBP17.35■□□□□ 0.37
HMGCS2-203ENST00000476640 DUSP27Q5VZP5 1158 aa17.35■□□□□ 0.37
HMGCS2-203ENST00000476640 MPNDQ8N594 471 aa17.35■□□□□ 0.37
HMGCS2-203ENST00000476640 RTFDC1Q9BY42 306 aaPredicted RBP17.35■□□□□ 0.37
HMGCS2-203ENST00000476640 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
HMGCS2-203ENST00000476640 GRAPQ13588 217 aa17.34■□□□□ 0.37
HMGCS2-203ENST00000476640 USP50Q70EL3 339 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms