RNA–Protein interactions for RNA: ENST00000475965.1

HDAC10-210, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,239 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-210ENST00000475965 MKRN1Q9UHC7 482 aaKnown RBP24.02■■□□□ 1.44
HDAC10-210ENST00000475965 TSPYL4Q9UJ04 414 aa24.01■■□□□ 1.43
HDAC10-210ENST00000475965 HOXA10P31260 410 aaPredicted RBP24■■□□□ 1.43
HDAC10-210ENST00000475965 EPHX2P34913 555 aa24■■□□□ 1.43
HDAC10-210ENST00000475965 SUSD4Q5VX71 490 aa24■■□□□ 1.43
HDAC10-210ENST00000475965 GIGYF2Q6Y7W6 1299 aaKnown RBP24■■□□□ 1.43
HDAC10-210ENST00000475965 ZNF34Q8IZ26 560 aa24■■□□□ 1.43
HDAC10-210ENST00000475965 JDP2Q8WYK2 163 aa24■■□□□ 1.43
HDAC10-210ENST00000475965 CNTNAP1P78357 1384 aa24■■□□□ 1.43
HDAC10-210ENST00000475965 GRIPAP1Q4V328 841 aa23.99■■□□□ 1.43
HDAC10-210ENST00000475965 PNMA8AQ86V59 439 aaPredicted RBP23.99■■□□□ 1.43
HDAC10-210ENST00000475965 GPC2Q8N158 579 aa23.99■■□□□ 1.43
HDAC10-210ENST00000475965 RNF123Q5XPI4 1314 aa23.99■■□□□ 1.43
HDAC10-210ENST00000475965 NTSR2O95665 410 aa23.98■■□□□ 1.43
HDAC10-210ENST00000475965 PPP1R42Q7Z4L9 355 aa23.98■■□□□ 1.43
HDAC10-210ENST00000475965 RBM17Q96I25 401 aaKnown RBP23.98■■□□□ 1.43
HDAC10-210ENST00000475965 CLEC11AQ9Y240 323 aa23.98■■□□□ 1.43
HDAC10-210ENST00000475965 COL4A5P29400 1685 aa23.98■■□□□ 1.43
HDAC10-210ENST00000475965 LAMB2P55268 1798 aa23.98■■□□□ 1.43
HDAC10-210ENST00000475965 PARP10Q53GL7 1025 aa23.97■■□□□ 1.43
HDAC10-210ENST00000475965 CRAMP1Q96RY5 1269 aa23.97■■□□□ 1.43
HDAC10-210ENST00000475965 PPEF1O14829 653 aaPredicted RBP23.96■■□□□ 1.43
HDAC10-210ENST00000475965 ITGBL1O95965 494 aaPredicted RBP23.96■■□□□ 1.43
HDAC10-210ENST00000475965 EIF6P56537 245 aaKnown RBP23.96■■□□□ 1.43
HDAC10-210ENST00000475965 RIPK4P57078 832 aa23.96■■□□□ 1.43
HDAC10-210ENST00000475965 TMEM88BA6NKF7 163 aa23.95■■□□□ 1.42
HDAC10-210ENST00000475965 BABAM1Q9NWV8 329 aa23.95■■□□□ 1.42
HDAC10-210ENST00000475965 LTBP1Q14766 1721 aa23.95■■□□□ 1.42
HDAC10-210ENST00000475965 CAPN15O75808 1086 aa23.94■■□□□ 1.42
HDAC10-210ENST00000475965 EIF2S2P20042 333 aaKnown RBP23.94■■□□□ 1.42
HDAC10-210ENST00000475965 LMOD3Q0VAK6 560 aa23.94■■□□□ 1.42
HDAC10-210ENST00000475965 LRP10Q7Z4F1 713 aa23.94■■□□□ 1.42
HDAC10-210ENST00000475965 GJA3Q9Y6H8 435 aa23.94■■□□□ 1.42
HDAC10-210ENST00000475965 PDIA6Q15084 440 aa23.93■■□□□ 1.42
HDAC10-210ENST00000475965 RALBP1Q15311 655 aa23.93■■□□□ 1.42
HDAC10-210ENST00000475965 C3orf67Q6ZVT6 689 aa23.93■■□□□ 1.42
HDAC10-210ENST00000475965 LARGE2Q8N3Y3 721 aa23.93■■□□□ 1.42
HDAC10-210ENST00000475965 NLRP3Q96P20 1036 aa23.93■■□□□ 1.42
HDAC10-210ENST00000475965 LMOD1P29536 600 aaPredicted RBP23.92■■□□□ 1.42
HDAC10-210ENST00000475965 UTP14AQ9BVJ6 771 aaKnown RBP23.92■■□□□ 1.42
HDAC10-210ENST00000475965 TCERG1O14776 1098 aaKnown RBP23.91■■□□□ 1.42
HDAC10-210ENST00000475965 TMPOP42166 694 aaKnown RBP23.91■■□□□ 1.42
HDAC10-210ENST00000475965 PROSER3Q2NL68 480 aa23.91■■□□□ 1.42
HDAC10-210ENST00000475965 MAP1SQ66K74 1059 aaPredicted RBP23.91■■□□□ 1.42
HDAC10-210ENST00000475965 CNTROBQ8N137 903 aa23.91■■□□□ 1.42
HDAC10-210ENST00000475965 TMX4Q9H1E5 349 aaPredicted RBP23.91■■□□□ 1.42
HDAC10-210ENST00000475965 TRPM7Q96QT4 1865 aa23.9■■□□□ 1.42
HDAC10-210ENST00000475965 ANXA1P04083 346 aa23.9■■□□□ 1.42
HDAC10-210ENST00000475965 SLC51AQ86UW1 340 aa23.9■■□□□ 1.42
HDAC10-210ENST00000475965 VEGFBP49765 207 aa23.89■■□□□ 1.41
HDAC10-210ENST00000475965 SLC10A5Q5PT55 438 aa23.89■■□□□ 1.41
HDAC10-210ENST00000475965 NIM1KQ8IY84 436 aa23.89■■□□□ 1.41
HDAC10-210ENST00000475965 HSP90AB3PQ58FF7 597 aa23.88■■□□□ 1.41
HDAC10-210ENST00000475965 ATP6V0A2Q9Y487 856 aa23.88■■□□□ 1.41
HDAC10-210ENST00000475965 ABCC4O15439 1325 aa23.87■■□□□ 1.41
HDAC10-210ENST00000475965 PPIP5K2O43314 1243 aa23.87■■□□□ 1.41
HDAC10-210ENST00000475965 SCNN1DP51172 638 aa23.87■■□□□ 1.41
HDAC10-210ENST00000475965 TAF1P21675 1872 aa23.86■■□□□ 1.41
HDAC10-210ENST00000475965 FOXN1O15353 648 aa23.86■■□□□ 1.41
HDAC10-210ENST00000475965 COPS6Q7L5N1 327 aa23.86■■□□□ 1.41
HDAC10-210ENST00000475965 XAGE3Q8WTP9 111 aa23.86■■□□□ 1.41
HDAC10-210ENST00000475965 NECTIN2Q92692 538 aa23.86■■□□□ 1.41
HDAC10-210ENST00000475965 AIDAQ96BJ3 306 aa23.86■■□□□ 1.41
HDAC10-210ENST00000475965 VPS33BQ9H267 617 aa23.86■■□□□ 1.41
HDAC10-210ENST00000475965 RASSF10A6NK89 507 aa23.85■■□□□ 1.41
HDAC10-210ENST00000475965 AIMP1Q12904 312 aaKnown RBP23.85■■□□□ 1.41
HDAC10-210ENST00000475965 AOC3Q16853 763 aa23.85■■□□□ 1.41
HDAC10-210ENST00000475965 NLRP10Q86W26 655 aa23.85■■□□□ 1.41
HDAC10-210ENST00000475965 SUPT20HQ8NEM7 779 aa23.85■■□□□ 1.41
HDAC10-210ENST00000475965 MYBBP1AQ9BQG0 1328 aaKnown RBP23.84■■□□□ 1.41
HDAC10-210ENST00000475965 EPS15P42566 896 aa23.84■■□□□ 1.41
HDAC10-210ENST00000475965 DDX21Q9NR30 783 aaKnown RBP eCLIP23.84■■□□□ 1.41
HDAC10-210ENST00000475965 DDX60Q8IY21 1712 aaKnown RBP23.84■■□□□ 1.41
HDAC10-210ENST00000475965 NEUROD2Q15784 382 aa23.83■■□□□ 1.41
HDAC10-210ENST00000475965 DEFB115Q30KQ5 88 aa23.83■■□□□ 1.41
HDAC10-210ENST00000475965 USP50Q70EL3 339 aaPredicted RBP23.83■■□□□ 1.41
HDAC10-210ENST00000475965 CCDC146Q8IYE0 955 aa23.83■■□□□ 1.41
HDAC10-210ENST00000475965 ABT1Q9ULW3 272 aaKnown RBP23.83■■□□□ 1.41
HDAC10-210ENST00000475965 LRRC37AA6NMS7 1700 aa23.82■■□□□ 1.4
HDAC10-210ENST00000475965 BBOX1O75936 387 aa23.82■■□□□ 1.4
HDAC10-210ENST00000475965 HCLS1P14317 486 aaPredicted RBP23.82■■□□□ 1.4
HDAC10-210ENST00000475965 CTCFP49711 727 aaPredicted RBP23.82■■□□□ 1.4
HDAC10-210ENST00000475965 TCIRG1Q13488 830 aa23.82■■□□□ 1.4
HDAC10-210ENST00000475965 DPP8Q6V1X1 898 aaPredicted RBP23.82■■□□□ 1.4
HDAC10-210ENST00000475965 RTFDC1Q9BY42 306 aaPredicted RBP23.82■■□□□ 1.4
HDAC10-210ENST00000475965 PRDM10Q9NQV6 1147 aa23.82■■□□□ 1.4
HDAC10-210ENST00000475965 TRMT112Q9UI30 125 aaKnown RBP23.82■■□□□ 1.4
HDAC10-210ENST00000475965 SH3TC1Q8TE82 1336 aa23.82■■□□□ 1.4
HDAC10-210ENST00000475965 CHL1O00533 1208 aa23.81■■□□□ 1.4
HDAC10-210ENST00000475965 DDX46Q7L014 1031 aaKnown RBP23.81■■□□□ 1.4
HDAC10-210ENST00000475965 ZNRF3Q9ULT6 936 aa23.81■■□□□ 1.4
HDAC10-210ENST00000475965 THSD7BQ9C0I4 1608 aa23.81■■□□□ 1.4
HDAC10-210ENST00000475965 WDR43Q15061 677 aaKnown RBP eCLIP23.8■■□□□ 1.4
HDAC10-210ENST00000475965 KRT24Q2M2I5 525 aa23.8■■□□□ 1.4
HDAC10-210ENST00000475965 SP8Q8IXZ3 490 aa23.8■■□□□ 1.4
HDAC10-210ENST00000475965 WBP1LQ9NX94 342 aa23.8■■□□□ 1.4
HDAC10-210ENST00000475965 LAS1LQ9Y4W2 734 aaKnown RBP23.8■■□□□ 1.4
HDAC10-210ENST00000475965 MPNDQ8N594 471 aa23.79■■□□□ 1.4
HDAC10-210ENST00000475965 RUNDC1Q96C34 613 aa23.79■■□□□ 1.4
HDAC10-210ENST00000475965 ADARB2Q9NS39 739 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms