RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 MIS18AQ9NYP9 233 aa19.45■□□□□ 0.7
TRIM11-203ENST00000475775 RNF123Q5XPI4 1314 aa19.45■□□□□ 0.7
TRIM11-203ENST00000475775 KLRG2A4D1S0 409 aaPredicted RBP19.44■□□□□ 0.7
TRIM11-203ENST00000475775 ERVV-1B6SEH8 477 aa19.44■□□□□ 0.7
TRIM11-203ENST00000475775 FKBP4Q02790 459 aaKnown RBP eCLIP19.44■□□□□ 0.7
TRIM11-203ENST00000475775 BEGAINQ9BUH8 593 aa19.44■□□□□ 0.7
TRIM11-203ENST00000475775 EIF4A1P60842 406 aaKnown RBP19.43■□□□□ 0.7
TRIM11-203ENST00000475775 DDX10Q13206 875 aaKnown RBP19.43■□□□□ 0.7
TRIM11-203ENST00000475775 RALBP1Q15311 655 aa19.43■□□□□ 0.7
TRIM11-203ENST00000475775 ERBB4Q15303 1308 aa19.43■□□□□ 0.7
TRIM11-203ENST00000475775 THSD7BQ9C0I4 1608 aa19.43■□□□□ 0.7
TRIM11-203ENST00000475775 ALDH1B1P30837 517 aa19.42■□□□□ 0.7
TRIM11-203ENST00000475775 DDX21Q9NR30 783 aaKnown RBP eCLIP19.42■□□□□ 0.7
TRIM11-203ENST00000475775 MAP3K15Q6ZN16 1313 aa19.42■□□□□ 0.7
TRIM11-203ENST00000475775 FAM177BA6PVY3 158 aa19.41■□□□□ 0.7
TRIM11-203ENST00000475775 LMOD3Q0VAK6 560 aa19.41■□□□□ 0.7
TRIM11-203ENST00000475775 HLFQ16534 295 aa19.41■□□□□ 0.7
TRIM11-203ENST00000475775 OLFM4Q6UX06 510 aa19.41■□□□□ 0.7
TRIM11-203ENST00000475775 PAXIP1Q6ZW49 1069 aaPredicted RBP19.41■□□□□ 0.7
TRIM11-203ENST00000475775 RTKN2Q8IZC4 609 aa19.41■□□□□ 0.7
TRIM11-203ENST00000475775 CAPNS2Q96L46 248 aa19.41■□□□□ 0.7
TRIM11-203ENST00000475775 GPR101Q96P66 508 aaPredicted RBP19.41■□□□□ 0.7
TRIM11-203ENST00000475775 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
TRIM11-203ENST00000475775 FZD9O00144 591 aa19.4■□□□□ 0.7
TRIM11-203ENST00000475775 GRM1Q13255 1194 aa19.4■□□□□ 0.7
TRIM11-203ENST00000475775 NGEFQ8N5V2 710 aa19.4■□□□□ 0.7
TRIM11-203ENST00000475775 CFAP44Q96MT7 982 aa19.4■□□□□ 0.7
TRIM11-203ENST00000475775 TSPYL4Q9UJ04 414 aa19.4■□□□□ 0.7
TRIM11-203ENST00000475775 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
TRIM11-203ENST00000475775 IARSP41252 1262 aaKnown RBP19.39■□□□□ 0.69
TRIM11-203ENST00000475775 ECE1P42892 770 aa19.39■□□□□ 0.69
TRIM11-203ENST00000475775 FMR1Q06787 632 aaKnown RBP eCLIP19.39■□□□□ 0.69
TRIM11-203ENST00000475775 CYP4F22Q6NT55 531 aa19.39■□□□□ 0.69
TRIM11-203ENST00000475775 GPC2Q8N158 579 aa19.39■□□□□ 0.69
TRIM11-203ENST00000475775 THUMPD2Q9BTF0 503 aaKnown RBP19.39■□□□□ 0.69
TRIM11-203ENST00000475775 BABAM1Q9NWV8 329 aa19.39■□□□□ 0.69
TRIM11-203ENST00000475775 TSKSQ9UJT2 592 aa19.39■□□□□ 0.69
TRIM11-203ENST00000475775 RIC1Q4ADV7 1423 aa19.39■□□□□ 0.69
TRIM11-203ENST00000475775 MYL6BP14649 208 aa19.38■□□□□ 0.69
TRIM11-203ENST00000475775 SYNE4Q8N205 404 aa19.38■□□□□ 0.69
TRIM11-203ENST00000475775 DLG5Q8TDM6 1919 aa19.38■□□□□ 0.69
TRIM11-203ENST00000475775 LTBP1Q14766 1721 aa19.37■□□□□ 0.69
TRIM11-203ENST00000475775 CRY2Q49AN0 593 aa19.37■□□□□ 0.69
TRIM11-203ENST00000475775 RIPK4P57078 832 aa19.36■□□□□ 0.69
TRIM11-203ENST00000475775 RPGRQ92834 1020 aaKnown RBP19.36■□□□□ 0.69
TRIM11-203ENST00000475775 ZBTB3Q9H5J0 574 aa19.36■□□□□ 0.69
TRIM11-203ENST00000475775 GJA3Q9Y6H8 435 aa19.36■□□□□ 0.69
TRIM11-203ENST00000475775 ABCC12Q96J65 1359 aa19.35■□□□□ 0.69
TRIM11-203ENST00000475775 MYBBP1AQ9BQG0 1328 aaKnown RBP19.35■□□□□ 0.69
TRIM11-203ENST00000475775 GRIPAP1Q4V328 841 aa19.35■□□□□ 0.69
TRIM11-203ENST00000475775 CC2D2BQ6DHV5 1058 aa19.35■□□□□ 0.69
TRIM11-203ENST00000475775 TTLL7Q6ZT98 887 aa19.35■□□□□ 0.69
TRIM11-203ENST00000475775 JDP2Q8WYK2 163 aa19.35■□□□□ 0.69
TRIM11-203ENST00000475775 PARP10Q53GL7 1025 aa19.34■□□□□ 0.69
TRIM11-203ENST00000475775 CST9Q5W186 159 aa19.34■□□□□ 0.69
TRIM11-203ENST00000475775 GIGYF2Q6Y7W6 1299 aaKnown RBP19.34■□□□□ 0.69
TRIM11-203ENST00000475775 PPP1R42Q7Z4L9 355 aa19.34■□□□□ 0.69
TRIM11-203ENST00000475775 NUTM1Q86Y26 1132 aa19.34■□□□□ 0.69
TRIM11-203ENST00000475775 MCOLN1Q9GZU1 580 aa19.34■□□□□ 0.69
TRIM11-203ENST00000475775 AOC2O75106 756 aa19.33■□□□□ 0.68
TRIM11-203ENST00000475775 GPTP24298 496 aa19.33■□□□□ 0.68
TRIM11-203ENST00000475775 LMOD1P29536 600 aaPredicted RBP19.33■□□□□ 0.68
TRIM11-203ENST00000475775 MAP2K2P36507 400 aa19.33■□□□□ 0.68
TRIM11-203ENST00000475775 EIF6P56537 245 aaKnown RBP19.33■□□□□ 0.68
TRIM11-203ENST00000475775 PSMD1Q99460 953 aa19.33■□□□□ 0.68
TRIM11-203ENST00000475775 UBN2Q6ZU65 1347 aa19.32■□□□□ 0.68
TRIM11-203ENST00000475775 TMPOP42166 694 aaKnown RBP19.32■□□□□ 0.68
TRIM11-203ENST00000475775 EPS15P42566 896 aa19.32■□□□□ 0.68
TRIM11-203ENST00000475775 RBM17Q96I25 401 aaKnown RBP19.32■□□□□ 0.68
TRIM11-203ENST00000475775 TLL2Q9Y6L7 1015 aa19.32■□□□□ 0.68
TRIM11-203ENST00000475775 TRAF5O00463 557 aa19.31■□□□□ 0.68
TRIM11-203ENST00000475775 SUSD4Q5VX71 490 aa19.31■□□□□ 0.68
TRIM11-203ENST00000475775 ZNF34Q8IZ26 560 aa19.31■□□□□ 0.68
TRIM11-203ENST00000475775 TMX4Q9H1E5 349 aaPredicted RBP19.31■□□□□ 0.68
TRIM11-203ENST00000475775 NTSR2O95665 410 aa19.3■□□□□ 0.68
TRIM11-203ENST00000475775 EIF2S2P20042 333 aaKnown RBP19.3■□□□□ 0.68
TRIM11-203ENST00000475775 HOXA10P31260 410 aaPredicted RBP19.3■□□□□ 0.68
TRIM11-203ENST00000475775 WDR43Q15061 677 aaKnown RBP eCLIP19.3■□□□□ 0.68
TRIM11-203ENST00000475775 HSP90AB3PQ58FF7 597 aa19.3■□□□□ 0.68
TRIM11-203ENST00000475775 COL4A5P29400 1685 aa19.3■□□□□ 0.68
TRIM11-203ENST00000475775 SCNN1DP51172 638 aa19.29■□□□□ 0.68
TRIM11-203ENST00000475775 NLRP3Q96P20 1036 aa19.29■□□□□ 0.68
TRIM11-203ENST00000475775 CRAMP1Q96RY5 1269 aa19.29■□□□□ 0.68
TRIM11-203ENST00000475775 NUP98P52948 1817 aa19.28■□□□□ 0.68
TRIM11-203ENST00000475775 SNED1Q8TER0 1413 aa19.28■□□□□ 0.68
TRIM11-203ENST00000475775 PPEF1O14829 653 aaPredicted RBP19.28■□□□□ 0.68
TRIM11-203ENST00000475775 CA12O43570 354 aa19.28■□□□□ 0.68
TRIM11-203ENST00000475775 DGKZQ13574 1117 aa19.28■□□□□ 0.68
TRIM11-203ENST00000475775 USP50Q70EL3 339 aaPredicted RBP19.28■□□□□ 0.68
TRIM11-203ENST00000475775 POLR2AP24928 1970 aaKnown RBP19.27■□□□□ 0.68
TRIM11-203ENST00000475775 UTP14AQ9BVJ6 771 aaKnown RBP19.27■□□□□ 0.68
TRIM11-203ENST00000475775 PDIA6Q15084 440 aa19.26■□□□□ 0.67
TRIM11-203ENST00000475775 LRP10Q7Z4F1 713 aa19.26■□□□□ 0.67
TRIM11-203ENST00000475775 SAPCD2Q86UD0 394 aa19.26■□□□□ 0.67
TRIM11-203ENST00000475775 RUNDC1Q96C34 613 aa19.26■□□□□ 0.67
TRIM11-203ENST00000475775 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
TRIM11-203ENST00000475775 LARGE2Q8N3Y3 721 aa19.25■□□□□ 0.67
TRIM11-203ENST00000475775 HOXB7P09629 217 aa19.24■□□□□ 0.67
TRIM11-203ENST00000475775 CCDC146Q8IYE0 955 aa19.24■□□□□ 0.67
TRIM11-203ENST00000475775 PRKRIP1Q9H875 184 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms