RNA–Protein interactions for RNA: ENST00000474251.5

PDE6B-208, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-208ENST00000474251 SYNE4Q8N205 404 aa23.72■■□□□ 1.39
PDE6B-208ENST00000474251 PSMD1Q99460 953 aa23.72■■□□□ 1.39
PDE6B-208ENST00000474251 TAF1DQ9H5J8 278 aaPredicted RBP23.72■■□□□ 1.39
PDE6B-208ENST00000474251 BABAM1Q9NWV8 329 aa23.72■■□□□ 1.39
PDE6B-208ENST00000474251 DDX60Q8IY21 1712 aaKnown RBP23.72■■□□□ 1.39
PDE6B-208ENST00000474251 MYBBP1AQ9BQG0 1328 aaKnown RBP23.71■■□□□ 1.39
PDE6B-208ENST00000474251 LMOD3Q0VAK6 560 aa23.71■■□□□ 1.39
PDE6B-208ENST00000474251 PROSER3Q2NL68 480 aa23.71■■□□□ 1.39
PDE6B-208ENST00000474251 RPGRQ92834 1020 aaKnown RBP23.71■■□□□ 1.39
PDE6B-208ENST00000474251 FZD9O00144 591 aa23.7■■□□□ 1.38
PDE6B-208ENST00000474251 EIF2S2P20042 333 aaKnown RBP23.7■■□□□ 1.38
PDE6B-208ENST00000474251 LDHDQ86WU2 507 aa23.7■■□□□ 1.38
PDE6B-208ENST00000474251 TRPM7Q96QT4 1865 aa23.7■■□□□ 1.38
PDE6B-208ENST00000474251 ANXA1P04083 346 aa23.69■■□□□ 1.38
PDE6B-208ENST00000474251 CC2D2BQ6DHV5 1058 aa23.69■■□□□ 1.38
PDE6B-208ENST00000474251 CREBZFQ9NS37 354 aa23.69■■□□□ 1.38
PDE6B-208ENST00000474251 PASKQ96RG2 1323 aa23.68■■□□□ 1.38
PDE6B-208ENST00000474251 PARP10Q53GL7 1025 aa23.68■■□□□ 1.38
PDE6B-208ENST00000474251 C3orf67Q6ZVT6 689 aa23.68■■□□□ 1.38
PDE6B-208ENST00000474251 PPP1R42Q7Z4L9 355 aa23.68■■□□□ 1.38
PDE6B-208ENST00000474251 SLC51AQ86UW1 340 aa23.68■■□□□ 1.38
PDE6B-208ENST00000474251 CRAMP1Q96RY5 1269 aa23.67■■□□□ 1.38
PDE6B-208ENST00000474251 HACL1Q9UJ83 578 aa23.67■■□□□ 1.38
PDE6B-208ENST00000474251 RNF123Q5XPI4 1314 aa23.66■■□□□ 1.38
PDE6B-208ENST00000474251 DDX10Q13206 875 aaKnown RBP23.66■■□□□ 1.38
PDE6B-208ENST00000474251 COL13A1Q5TAT6 717 aaPredicted RBP23.66■■□□□ 1.38
PDE6B-208ENST00000474251 CCDC146Q8IYE0 955 aa23.66■■□□□ 1.38
PDE6B-208ENST00000474251 RBM17Q96I25 401 aaKnown RBP23.66■■□□□ 1.38
PDE6B-208ENST00000474251 LRRC37AA6NMS7 1700 aa23.66■■□□□ 1.38
PDE6B-208ENST00000474251 PPEF1O14829 653 aaPredicted RBP23.65■■□□□ 1.38
PDE6B-208ENST00000474251 HSPA1AP0DMV8 641 aaKnown RBP23.65■■□□□ 1.38
PDE6B-208ENST00000474251 HSPA1BP0DMV9 641 aaKnown RBP23.65■■□□□ 1.38
PDE6B-208ENST00000474251 EPHX2P34913 555 aa23.64■■□□□ 1.37
PDE6B-208ENST00000474251 GRIPAP1Q4V328 841 aa23.64■■□□□ 1.37
PDE6B-208ENST00000474251 EAPPQ56P03 285 aaPredicted RBP23.64■■□□□ 1.37
PDE6B-208ENST00000474251 GPC2Q8N158 579 aa23.64■■□□□ 1.37
PDE6B-208ENST00000474251 JDP2Q8WYK2 163 aa23.64■■□□□ 1.37
PDE6B-208ENST00000474251 UTP14AQ9BVJ6 771 aaKnown RBP23.64■■□□□ 1.37
PDE6B-208ENST00000474251 NEUROD2Q15784 382 aa23.63■■□□□ 1.37
PDE6B-208ENST00000474251 KRT24Q2M2I5 525 aa23.63■■□□□ 1.37
PDE6B-208ENST00000474251 NECTIN2Q92692 538 aa23.63■■□□□ 1.37
PDE6B-208ENST00000474251 NLRP3Q96P20 1036 aa23.63■■□□□ 1.37
PDE6B-208ENST00000474251 CHL1O00533 1208 aa23.62■■□□□ 1.37
PDE6B-208ENST00000474251 SLC10A5Q5PT55 438 aa23.62■■□□□ 1.37
PDE6B-208ENST00000474251 COPS6Q7L5N1 327 aa23.62■■□□□ 1.37
PDE6B-208ENST00000474251 XAGE3Q8WTP9 111 aa23.62■■□□□ 1.37
PDE6B-208ENST00000474251 RUNDC1Q96C34 613 aa23.62■■□□□ 1.37
PDE6B-208ENST00000474251 MKRN1Q9UHC7 482 aaKnown RBP23.62■■□□□ 1.37
PDE6B-208ENST00000474251 TRIM35Q9UPQ4 493 aa23.62■■□□□ 1.37
PDE6B-208ENST00000474251 ITGBL1O95965 494 aaPredicted RBP23.61■■□□□ 1.37
PDE6B-208ENST00000474251 CNTNAP1P78357 1384 aa23.61■■□□□ 1.37
PDE6B-208ENST00000474251 ABCC4O15439 1325 aa23.6■■□□□ 1.37
PDE6B-208ENST00000474251 TCERG1O14776 1098 aaKnown RBP23.6■■□□□ 1.37
PDE6B-208ENST00000474251 EIF6P56537 245 aaKnown RBP23.6■■□□□ 1.37
PDE6B-208ENST00000474251 AIMP1Q12904 312 aaKnown RBP23.6■■□□□ 1.37
PDE6B-208ENST00000474251 HSP90AB3PQ58FF7 597 aa23.6■■□□□ 1.37
PDE6B-208ENST00000474251 LARGE2Q8N3Y3 721 aa23.6■■□□□ 1.37
PDE6B-208ENST00000474251 DDX21Q9NR30 783 aaKnown RBP eCLIP23.6■■□□□ 1.37
PDE6B-208ENST00000474251 WDR43Q15061 677 aaKnown RBP eCLIP23.59■■□□□ 1.37
PDE6B-208ENST00000474251 PNMA8AQ86V59 439 aaPredicted RBP23.59■■□□□ 1.37
PDE6B-208ENST00000474251 NLRP10Q86W26 655 aa23.59■■□□□ 1.37
PDE6B-208ENST00000474251 CLEC11AQ9Y240 323 aa23.58■■□□□ 1.37
PDE6B-208ENST00000474251 ATP6V0A2Q9Y487 856 aa23.58■■□□□ 1.37
PDE6B-208ENST00000474251 DUOX1Q9NRD9 1551 aa23.57■■□□□ 1.36
PDE6B-208ENST00000474251 TCIRG1Q13488 830 aa23.57■■□□□ 1.36
PDE6B-208ENST00000474251 CHPF2Q9P2E5 772 aa23.57■■□□□ 1.36
PDE6B-208ENST00000474251 LAS1LQ9Y4W2 734 aaKnown RBP23.57■■□□□ 1.36
PDE6B-208ENST00000474251 GJA3Q9Y6H8 435 aa23.57■■□□□ 1.36
PDE6B-208ENST00000474251 TMEM88BA6NKF7 163 aa23.56■■□□□ 1.36
PDE6B-208ENST00000474251 SCNN1DP51172 638 aa23.56■■□□□ 1.36
PDE6B-208ENST00000474251 MAP1SQ66K74 1059 aaPredicted RBP23.56■■□□□ 1.36
PDE6B-208ENST00000474251 NIM1KQ8IY84 436 aa23.56■■□□□ 1.36
PDE6B-208ENST00000474251 ADAMTS8Q9UP79 889 aa23.56■■□□□ 1.36
PDE6B-208ENST00000474251 PPIP5K2O43314 1243 aa23.55■■□□□ 1.36
PDE6B-208ENST00000474251 HOXB7P09629 217 aa23.55■■□□□ 1.36
PDE6B-208ENST00000474251 HCLS1P14317 486 aaPredicted RBP23.55■■□□□ 1.36
PDE6B-208ENST00000474251 SH3TC1Q8TE82 1336 aa23.55■■□□□ 1.36
PDE6B-208ENST00000474251 COL4A1P02462 1669 aa23.54■■□□□ 1.36
PDE6B-208ENST00000474251 LMOD1P29536 600 aaPredicted RBP23.54■■□□□ 1.36
PDE6B-208ENST00000474251 AOC3Q16853 763 aa23.54■■□□□ 1.36
PDE6B-208ENST00000474251 HDGFL1Q5TGJ6 251 aa23.54■■□□□ 1.36
PDE6B-208ENST00000474251 CNTROBQ8N137 903 aa23.54■■□□□ 1.36
PDE6B-208ENST00000474251 RTFDC1Q9BY42 306 aaPredicted RBP23.54■■□□□ 1.36
PDE6B-208ENST00000474251 TRMT112Q9UI30 125 aaKnown RBP23.54■■□□□ 1.36
PDE6B-208ENST00000474251 THSD7BQ9C0I4 1608 aa23.54■■□□□ 1.36
PDE6B-208ENST00000474251 ZEB1P37275 1124 aaPredicted RBP23.53■■□□□ 1.36
PDE6B-208ENST00000474251 TNS4Q8IZW8 715 aa23.53■■□□□ 1.36
PDE6B-208ENST00000474251 TMX4Q9H1E5 349 aaPredicted RBP23.53■■□□□ 1.36
PDE6B-208ENST00000474251 VPS33BQ9H267 617 aa23.53■■□□□ 1.36
PDE6B-208ENST00000474251 POLR2AP24928 1970 aaKnown RBP23.52■■□□□ 1.36
PDE6B-208ENST00000474251 EPS15P42566 896 aa23.52■■□□□ 1.36
PDE6B-208ENST00000474251 MYH3P11055 1940 aa23.51■■□□□ 1.35
PDE6B-208ENST00000474251 BBOX1O75936 387 aa23.51■■□□□ 1.35
PDE6B-208ENST00000474251 SP8Q8IXZ3 490 aa23.51■■□□□ 1.35
PDE6B-208ENST00000474251 SUPT20HQ8NEM7 779 aa23.51■■□□□ 1.35
PDE6B-208ENST00000474251 PLBD2Q8NHP8 589 aa23.51■■□□□ 1.35
PDE6B-208ENST00000474251 CFAP44Q96MT7 982 aa23.51■■□□□ 1.35
PDE6B-208ENST00000474251 PRKRIP1Q9H875 184 aaPredicted RBP23.51■■□□□ 1.35
PDE6B-208ENST00000474251 VEGFBP49765 207 aa23.5■■□□□ 1.35
PDE6B-208ENST00000474251 GRAPQ13588 217 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms